RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 DNMT1P26358 1616 aaKnown RBP19.74■□□□□ 0.75
HSPG2-212ENST00000493940 NPATQ14207 1427 aa19.74■□□□□ 0.75
HSPG2-212ENST00000493940 MROH1Q8NDA8 1641 aa19.73■□□□□ 0.75
HSPG2-212ENST00000493940 MYO3AQ8NEV4 1616 aa19.73■□□□□ 0.75
HSPG2-212ENST00000493940 RNF17Q9BXT8 1623 aaKnown RBP19.73■□□□□ 0.75
HSPG2-212ENST00000493940 FBXO31Q5XUX0 539 aaPredicted RBP19.72■□□□□ 0.75
HSPG2-212ENST00000493940 PPP6R1Q9UPN7 881 aa19.72■□□□□ 0.75
HSPG2-212ENST00000493940 CEP152O94986 1710 aa19.71■□□□□ 0.75
HSPG2-212ENST00000493940 DAPK1P53355 1430 aa19.71■□□□□ 0.75
HSPG2-212ENST00000493940 ZNF142P52746 1687 aaPredicted RBP19.7■□□□□ 0.74
HSPG2-212ENST00000493940 EIF2AK4Q9P2K8 1649 aaKnown RBP19.69■□□□□ 0.74
HSPG2-212ENST00000493940 PPARGC1BQ86YN6 1023 aaKnown RBP19.69■□□□□ 0.74
HSPG2-212ENST00000493940 KDM5DQ9BY66 1539 aa19.69■□□□□ 0.74
HSPG2-212ENST00000493940 RRP7BPQ9NSQ0 103 aa19.68■□□□□ 0.74
HSPG2-212ENST00000493940 CAMSAP1Q5T5Y3 1602 aa19.68■□□□□ 0.74
HSPG2-212ENST00000493940 CHIC2Q9UKJ5 165 aa19.67■□□□□ 0.74
HSPG2-212ENST00000493940 SHANK2Q9UPX8 1470 aa19.67■□□□□ 0.74
HSPG2-212ENST00000493940 DUOX2Q9NRD8 1548 aa19.66■□□□□ 0.74
HSPG2-212ENST00000493940 WASHC2CQ9Y4E1 1318 aa19.66■□□□□ 0.74
HSPG2-212ENST00000493940 CEP170BQ9Y4F5 1589 aaPredicted RBP19.66■□□□□ 0.74
HSPG2-212ENST00000493940 NCOA1Q15788 1441 aa19.65■□□□□ 0.74
HSPG2-212ENST00000493940 ABCC3O15438 1527 aa19.65■□□□□ 0.74
HSPG2-212ENST00000493940 KIF15Q9NS87 1388 aa19.64■□□□□ 0.73
HSPG2-212ENST00000493940 PTPRTO14522 1441 aa19.64■□□□□ 0.73
HSPG2-212ENST00000493940 PZPP20742 1482 aa19.64■□□□□ 0.73
HSPG2-212ENST00000493940 FAM135AQ9P2D6 1515 aa19.62■□□□□ 0.73
HSPG2-212ENST00000493940 NCKAP5LQ9HCH0 1330 aa19.62■□□□□ 0.73
HSPG2-212ENST00000493940 ZC3H13Q5T200 1668 aaKnown RBP19.62■□□□□ 0.73
HSPG2-212ENST00000493940 FAM50AQ14320 339 aaKnown RBP19.61■□□□□ 0.73
HSPG2-212ENST00000493940 DEPDC5O75140 1603 aa19.6■□□□□ 0.73
HSPG2-212ENST00000493940 TNRQ92752 1358 aa19.58■□□□□ 0.73
HSPG2-212ENST00000493940 A2ML1A8K2U0 1454 aa19.58■□□□□ 0.72
HSPG2-212ENST00000493940 PRDM15P57071 1507 aaPredicted RBP19.57■□□□□ 0.72
HSPG2-212ENST00000493940 ERBINQ96RT1 1412 aa19.57■□□□□ 0.72
HSPG2-212ENST00000493940 ADGRL2O95490 1459 aa19.56■□□□□ 0.72
HSPG2-212ENST00000493940 SPATA31D1Q6ZQQ2 1576 aa19.55■□□□□ 0.72
HSPG2-212ENST00000493940 ANKRD30AQ9BXX3 1397 aa19.55■□□□□ 0.72
HSPG2-212ENST00000493940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.723e-7■■□□□ 11.8
HSPG2-212ENST00000493940 DISP3Q9P2K9 1392 aa19.54■□□□□ 0.72
HSPG2-212ENST00000493940 LTBP4Q8N2S1 1624 aa19.54■□□□□ 0.72
HSPG2-212ENST00000493940 POLR1AO95602 1720 aaPredicted RBP19.54■□□□□ 0.72
HSPG2-212ENST00000493940 ERVK-7P63135 1459 aa19.53■□□□□ 0.72
HSPG2-212ENST00000493940 PLA2R1Q13018 1463 aa19.53■□□□□ 0.72
HSPG2-212ENST00000493940 VWDEQ8N2E2 1590 aa19.53■□□□□ 0.72
HSPG2-212ENST00000493940 ILDR2Q71H61 639 aa19.52■□□□□ 0.72
HSPG2-212ENST00000493940 NEURL4Q96JN8 1562 aa19.51■□□□□ 0.71
HSPG2-212ENST00000493940 UBR1Q8IWV7 1749 aa19.49■□□□□ 0.71
HSPG2-212ENST00000493940 UGGT1Q9NYU2 1555 aa19.49■□□□□ 0.71
HSPG2-212ENST00000493940 IQSEC2Q5JU85 1478 aa19.48■□□□□ 0.71
HSPG2-212ENST00000493940 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.48■□□□□ 0.719e-9■■■■■ 30.5
HSPG2-212ENST00000493940 NLRP1Q9C000 1473 aa19.48■□□□□ 0.71
HSPG2-212ENST00000493940 SOCS7O14512 581 aa19.47■□□□□ 0.71
HSPG2-212ENST00000493940 PKD2Q13563 968 aa19.47■□□□□ 0.71
HSPG2-212ENST00000493940 ARHGAP31Q2M1Z3 1444 aa19.47■□□□□ 0.71
HSPG2-212ENST00000493940 ZNF335Q9H4Z2 1342 aaPredicted RBP19.46■□□□□ 0.71
HSPG2-212ENST00000493940 LMTK2Q8IWU2 1503 aa19.45■□□□□ 0.7
HSPG2-212ENST00000493940 ANKRD50Q9ULJ7 1429 aa19.44■□□□□ 0.7
HSPG2-212ENST00000493940 ITGAEP38570 1179 aa19.44■□□□□ 0.7
HSPG2-212ENST00000493940 SYNMO15061 1565 aa19.43■□□□□ 0.7
HSPG2-212ENST00000493940 PIK3C2BO00750 1634 aa19.43■□□□□ 0.7
HSPG2-212ENST00000493940 THEMISQ8N1K5 641 aaPredicted RBP19.41■□□□□ 0.7
HSPG2-212ENST00000493940 MYO5BQ9ULV0 1848 aa19.41■□□□□ 0.7
HSPG2-212ENST00000493940 EFCAB6Q5THR3 1501 aa19.41■□□□□ 0.7
HSPG2-212ENST00000493940 STRCP1A6NGW2 1772 aa19.4■□□□□ 0.7
HSPG2-212ENST00000493940 KANK1Q14678 1352 aa19.4■□□□□ 0.7
HSPG2-212ENST00000493940 UNC13BO14795 1591 aa19.4■□□□□ 0.7
HSPG2-212ENST00000493940 ROCK1Q13464 1354 aa19.38■□□□□ 0.69
HSPG2-212ENST00000493940 ANKLE2Q86XL3 938 aa19.37■□□□□ 0.69
HSPG2-212ENST00000493940 E9PCH4 1651 aa19.36■□□□□ 0.69
HSPG2-212ENST00000493940 TET3O43151 1660 aa19.36■□□□□ 0.69
HSPG2-212ENST00000493940 IQGAP1P46940 1657 aa19.36■□□□□ 0.69
HSPG2-212ENST00000493940 GCC2Q8IWJ2 1684 aa19.36■□□□□ 0.69
HSPG2-212ENST00000493940 MED14O60244 1454 aa19.36■□□□□ 0.69
HSPG2-212ENST00000493940 NOS1P29475 1434 aa19.36■□□□□ 0.69
HSPG2-212ENST00000493940 RRBP1Q9P2E9 1410 aaKnown RBP19.36■□□□□ 0.69
HSPG2-212ENST00000493940 LTKP29376 864 aa19.36■□□□□ 0.69
HSPG2-212ENST00000493940 IDI1Q13907 227 aa19.36■□□□□ 0.69
HSPG2-212ENST00000493940 UBAP1LF5GYI3 381 aa19.34■□□□□ 0.69
HSPG2-212ENST00000493940 ARHGAP23Q9P227 1491 aa19.34■□□□□ 0.69
HSPG2-212ENST00000493940 NPHP4O75161 1426 aaPredicted RBP19.34■□□□□ 0.69
HSPG2-212ENST00000493940 IQGAP3Q86VI3 1631 aa19.33■□□□□ 0.68
HSPG2-212ENST00000493940 SLIT1O75093 1534 aa19.32■□□□□ 0.68
HSPG2-212ENST00000493940 KDM5AP29375 1690 aaKnown RBP19.31■□□□□ 0.68
HSPG2-212ENST00000493940 SCAF11Q99590 1463 aaKnown RBP19.28■□□□□ 0.68
HSPG2-212ENST00000493940 TXNDC2Q86VQ3 553 aa19.27■□□□□ 0.68
HSPG2-212ENST00000493940 RPRD2Q5VT52 1461 aaKnown RBP19.27■□□□□ 0.67
HSPG2-212ENST00000493940 TMEM2Q9UHN6 1383 aa19.26■□□□□ 0.67
HSPG2-212ENST00000493940 XIRP1Q702N8 1843 aaKnown RBP19.25■□□□□ 0.67
HSPG2-212ENST00000493940 NUP155O75694 1391 aa19.25■□□□□ 0.67
HSPG2-212ENST00000493940 TMEM131LA2VDJ0 1609 aa19.25■□□□□ 0.67
HSPG2-212ENST00000493940 ADGRB3O60242 1522 aa19.25■□□□□ 0.67
HSPG2-212ENST00000493940 NAIPQ13075 1403 aa19.25■□□□□ 0.67
HSPG2-212ENST00000493940 ALKQ9UM73 1620 aa19.22■□□□□ 0.67
HSPG2-212ENST00000493940 CPS1P31327 1500 aa19.21■□□□□ 0.67
HSPG2-212ENST00000493940 STAG3Q9UJ98 1225 aa19.21■□□□□ 0.67
HSPG2-212ENST00000493940 SENP3Q9H4L4 574 aaPredicted RBP19.2■□□□□ 0.66
HSPG2-212ENST00000493940 SLC52A1Q9NWF4 448 aa19.2■□□□□ 0.66
HSPG2-212ENST00000493940 SPHKAPQ2M3C7 1700 aa19.2■□□□□ 0.66
HSPG2-212ENST00000493940 TOM1O60784 492 aa19.18■□□□□ 0.66
HSPG2-212ENST00000493940 LRRC7Q96NW7 1537 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms