RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 POTEBQ6S5H4 581 aa8.15□□□□□ -1.1
GTF3A-208ENST00000493903 PODXL2Q9NZ53 605 aa8.15□□□□□ -1.1
GTF3A-208ENST00000493903 PDIA6Q15084 440 aa8.14□□□□□ -1.11
GTF3A-208ENST00000493903 HS3ST6Q96QI5 342 aa8.14□□□□□ -1.11
GTF3A-208ENST00000493903 UBTFP17480 764 aaKnown RBP8.13□□□□□ -1.11
GTF3A-208ENST00000493903 ANO8Q9HCE9 1232 aaPredicted RBP8.13□□□□□ -1.11
GTF3A-208ENST00000493903 MINK1Q8N4C8 1332 aaPredicted RBP8.09□□□□□ -1.11
GTF3A-208ENST00000493903 ZNF454Q8N9F8 522 aa8.09□□□□□ -1.11
GTF3A-208ENST00000493903 DDX12PQ92771 950 aa8.09□□□□□ -1.11
GTF3A-208ENST00000493903 DDRGK1Q96HY6 314 aa8.09□□□□□ -1.11
GTF3A-208ENST00000493903 PSDA5PKW4 1024 aaPredicted RBP8.08□□□□□ -1.12
GTF3A-208ENST00000493903 FOSBP53539 338 aa8.08□□□□□ -1.12
GTF3A-208ENST00000493903 JPH4Q96JJ6 628 aa8.08□□□□□ -1.12
GTF3A-208ENST00000493903 GPR37O15354 613 aa8.07□□□□□ -1.12
GTF3A-208ENST00000493903 PPP4R3BQ5MIZ7 849 aa8.07□□□□□ -1.12
GTF3A-208ENST00000493903 PTGER2P43116 358 aa8.06□□□□□ -1.12
GTF3A-208ENST00000493903 FLIIQ13045 1269 aa8.06□□□□□ -1.12
GTF3A-208ENST00000493903 FAM117AQ9C073 453 aa8.06□□□□□ -1.12
GTF3A-208ENST00000493903 PCDHGA10Q9Y5H3 936 aa8.06□□□□□ -1.12
GTF3A-208ENST00000493903 GRXCR2A6NFK2 248 aa8.05□□□□□ -1.12
GTF3A-208ENST00000493903 PHF14O94880 888 aa8.05□□□□□ -1.12
GTF3A-208ENST00000493903 RANGAP1P46060 587 aaPredicted RBP8.05□□□□□ -1.12
GTF3A-208ENST00000493903 CDAN1Q8IWY9 1227 aa8.05□□□□□ -1.12
GTF3A-208ENST00000493903 ZNF687Q8N1G0 1237 aa8.05□□□□□ -1.12
GTF3A-208ENST00000493903 MAP2K5Q13163 448 aa8.04□□□□□ -1.12
GTF3A-208ENST00000493903 AMHR2Q16671 573 aa8.04□□□□□ -1.12
GTF3A-208ENST00000493903 ZDHHC16Q969W1 377 aa8.04□□□□□ -1.12
GTF3A-208ENST00000493903 GOPCQ9HD26 462 aa8.04□□□□□ -1.12
GTF3A-208ENST00000493903 TYW1BQ6NUM6 668 aa8.03□□□□□ -1.12
GTF3A-208ENST00000493903 POTEEQ6S8J3 1075 aa8.03□□□□□ -1.12
GTF3A-208ENST00000493903 TRIM26Q12899 539 aaPredicted RBP8.02□□□□□ -1.13
GTF3A-208ENST00000493903 ADAM33Q9BZ11 813 aa8.02□□□□□ -1.13
GTF3A-208ENST00000493903 AXIN2Q9Y2T1 843 aa8.02□□□□□ -1.13
GTF3A-208ENST00000493903 PLEKHG3A1L390 1219 aa8.01□□□□□ -1.13
GTF3A-208ENST00000493903 IRF6O14896 467 aa8.01□□□□□ -1.13
GTF3A-208ENST00000493903 PRIM1P49642 420 aaKnown RBP8.01□□□□□ -1.13
GTF3A-208ENST00000493903 FBXW7Q969H0 707 aa8.01□□□□□ -1.13
GTF3A-208ENST00000493903 RBM33Q96EV2 1170 aaKnown RBP8.01□□□□□ -1.13
GTF3A-208ENST00000493903 EPAS1Q99814 870 aa8.01□□□□□ -1.13
GTF3A-208ENST00000493903 KRTAP3-3Q9BYR6 98 aa8.01□□□□□ -1.13
GTF3A-208ENST00000493903 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
GTF3A-208ENST00000493903 OSBPP22059 807 aa8□□□□□ -1.13
GTF3A-208ENST00000493903 CCDC102AQ96A19 550 aa8□□□□□ -1.13
GTF3A-208ENST00000493903 KCNK17Q96T54 332 aa8□□□□□ -1.13
GTF3A-208ENST00000493903 C1orf115Q9H7X2 142 aa8□□□□□ -1.13
GTF3A-208ENST00000493903 BCL2L12Q9HB09 334 aa8□□□□□ -1.13
GTF3A-208ENST00000493903 PSEN2P49810 448 aa7.99□□□□□ -1.13
GTF3A-208ENST00000493903 ARHGAP33O14559 1287 aa7.98□□□□□ -1.13
GTF3A-208ENST00000493903 PBX2P40425 430 aa7.98□□□□□ -1.13
GTF3A-208ENST00000493903 EN1Q05925 392 aaPredicted RBP7.98□□□□□ -1.13
GTF3A-208ENST00000493903 PARP9Q8IXQ6 854 aa7.98□□□□□ -1.13
GTF3A-208ENST00000493903 NUTM2FA1L443 756 aa7.97□□□□□ -1.13
GTF3A-208ENST00000493903 GNPATO15228 680 aa7.97□□□□□ -1.13
GTF3A-208ENST00000493903 MAP3K7O43318 606 aa7.97□□□□□ -1.13
GTF3A-208ENST00000493903 PTPREP23469 700 aa7.97□□□□□ -1.13
GTF3A-208ENST00000493903 HIC1Q14526 733 aa7.97□□□□□ -1.13
GTF3A-208ENST00000493903 TSR1Q2NL82 804 aaKnown RBP7.97□□□□□ -1.13
GTF3A-208ENST00000493903 ARID3AQ99856 593 aa7.97□□□□□ -1.13
GTF3A-208ENST00000493903 PCDH10Q9P2E7 1040 aa7.97□□□□□ -1.13
GTF3A-208ENST00000493903 A6NJR5 290 aa7.96□□□□□ -1.14
GTF3A-208ENST00000493903 APBB1O00213 710 aa7.96□□□□□ -1.14
GTF3A-208ENST00000493903 C6orf132Q5T0Z8 1188 aa7.96□□□□□ -1.14
GTF3A-208ENST00000493903 DMRTA1Q5VZB9 504 aa7.96□□□□□ -1.14
GTF3A-208ENST00000493903 ONECUT3O60422 494 aaPredicted RBP7.95□□□□□ -1.14
GTF3A-208ENST00000493903 FCHSD2O94868 740 aa7.95□□□□□ -1.14
GTF3A-208ENST00000493903 HRCP23327 699 aa7.95□□□□□ -1.14
GTF3A-208ENST00000493903 LSM11P83369 360 aaKnown RBP eCLIP7.95□□□□□ -1.14
GTF3A-208ENST00000493903 KCNH8Q96L42 1107 aa7.95□□□□□ -1.14
GTF3A-208ENST00000493903 COL9A1P20849 921 aa7.94□□□□□ -1.14
GTF3A-208ENST00000493903 ANKRD13DQ6ZTN6 518 aa7.93□□□□□ -1.14
GTF3A-208ENST00000493903 CDHR5Q9HBB8 845 aa7.93□□□□□ -1.14
GTF3A-208ENST00000493903 ARID3CA6NKF2 412 aa7.92□□□□□ -1.14
GTF3A-208ENST00000493903 PPP1R3GB7ZBB8 358 aa7.92□□□□□ -1.14
GTF3A-208ENST00000493903 PCMTD1Q96MG8 357 aaPredicted RBP7.92□□□□□ -1.14
GTF3A-208ENST00000493903 TTLL12Q14166 644 aaPredicted RBP7.91□□□□□ -1.14
GTF3A-208ENST00000493903 TRAK2O60296 914 aa7.9□□□□□ -1.14
GTF3A-208ENST00000493903 PDIA4P13667 645 aaKnown RBP7.9□□□□□ -1.14
GTF3A-208ENST00000493903 ZBED2Q9BTP6 218 aa7.9□□□□□ -1.14
GTF3A-208ENST00000493903 PROX2Q3B8N5 592 aa7.89□□□□□ -1.15
GTF3A-208ENST00000493903 ADGRD1Q6QNK2 874 aa7.89□□□□□ -1.15
GTF3A-208ENST00000493903 ZBTB7CA1YPR0 619 aa7.88□□□□□ -1.15
GTF3A-208ENST00000493903 NPM2Q86SE8 214 aaKnown RBP7.88□□□□□ -1.15
GTF3A-208ENST00000493903 NPDC1Q9NQX5 325 aaPredicted RBP7.88□□□□□ -1.15
GTF3A-208ENST00000493903 VPS9D1Q9Y2B5 631 aa7.88□□□□□ -1.15
GTF3A-208ENST00000493903 TK2O00142 265 aa7.87□□□□□ -1.15
GTF3A-208ENST00000493903 SH3D19Q5HYK7 790 aa7.87□□□□□ -1.15
GTF3A-208ENST00000493903 GIGYF2Q6Y7W6 1299 aaKnown RBP7.87□□□□□ -1.15
GTF3A-208ENST00000493903 FECHP22830 423 aa7.86□□□□□ -1.15
GTF3A-208ENST00000493903 PTGDRQ13258 359 aa7.86□□□□□ -1.15
GTF3A-208ENST00000493903 SLC4A5Q9BY07 1137 aa7.86□□□□□ -1.15
GTF3A-208ENST00000493903 MS4A1P11836 297 aa7.85□□□□□ -1.15
GTF3A-208ENST00000493903 MCM6Q14566 821 aa7.85□□□□□ -1.15
GTF3A-208ENST00000493903 CCDC82Q8N4S0 544 aa7.85□□□□□ -1.15
GTF3A-208ENST00000493903 CERKQ8TCT0 537 aa7.85□□□□□ -1.15
GTF3A-208ENST00000493903 CDCA7LQ96GN5 454 aa7.85□□□□□ -1.15
GTF3A-208ENST00000493903 TRIM6-TRIM34B2RNG4 842 aa7.84□□□□□ -1.15
GTF3A-208ENST00000493903 PRSS12P56730 875 aa7.84□□□□□ -1.15
GTF3A-208ENST00000493903 SPNS2Q8IVW8 549 aa7.84□□□□□ -1.15
GTF3A-208ENST00000493903 CLUAP1Q96AJ1 413 aa7.84□□□□□ -1.15
GTF3A-208ENST00000493903 TSKSQ9UJT2 592 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms