RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 ESF1Q9H501 851 aaKnown RBP26.88■■□□□ 1.89
PDLIM7-208ENST00000493815 RNF17Q9BXT8 1623 aaKnown RBP26.86■■□□□ 1.89
PDLIM7-208ENST00000493815 MROH1Q8NDA8 1641 aa26.86■■□□□ 1.89
PDLIM7-208ENST00000493815 FER1L4A9Z1Z3 1794 aa26.86■■□□□ 1.89
PDLIM7-208ENST00000493815 TRIM26Q12899 539 aaPredicted RBP26.85■■□□□ 1.89
PDLIM7-208ENST00000493815 RIMS1Q86UR5 1692 aaKnown RBP26.85■■□□□ 1.89
PDLIM7-208ENST00000493815 WASHC2CQ9Y4E1 1318 aa26.85■■□□□ 1.89
PDLIM7-208ENST00000493815 GCC2Q8IWJ2 1684 aa26.84■■□□□ 1.89
PDLIM7-208ENST00000493815 CEBPAP49715 358 aaPredicted RBP26.82■■□□□ 1.88
PDLIM7-208ENST00000493815 PPP6R1Q9UPN7 881 aa26.81■■□□□ 1.88
PDLIM7-208ENST00000493815 PTPRMP28827 1452 aa26.8■■□□□ 1.88
PDLIM7-208ENST00000493815 DEPDC5O75140 1603 aa26.8■■□□□ 1.88
PDLIM7-208ENST00000493815 CLTCQ00610 1675 aaKnown RBP26.8■■□□□ 1.88
PDLIM7-208ENST00000493815 PRDM15P57071 1507 aaPredicted RBP26.79■■□□□ 1.88
PDLIM7-208ENST00000493815 KDM5DQ9BY66 1539 aa26.78■■□□□ 1.88
PDLIM7-208ENST00000493815 SETD5Q9C0A6 1442 aa26.77■■□□□ 1.88
PDLIM7-208ENST00000493815 CNTLNQ9NXG0 1405 aa26.77■■□□□ 1.88
PDLIM7-208ENST00000493815 ABCC3O15438 1527 aa26.76■■□□□ 1.87
PDLIM7-208ENST00000493815 ZMYM3Q14202 1370 aa26.76■■□□□ 1.87
PDLIM7-208ENST00000493815 KANK1Q14678 1352 aa26.76■■□□□ 1.87
PDLIM7-208ENST00000493815 NUP155O75694 1391 aa26.74■■□□□ 1.87
PDLIM7-208ENST00000493815 UNC13BO14795 1591 aa26.74■■□□□ 1.87
PDLIM7-208ENST00000493815 TRIM52Q96A61 297 aa26.73■■□□□ 1.87
PDLIM7-208ENST00000493815 CEP152O94986 1710 aa26.73■■□□□ 1.87
PDLIM7-208ENST00000493815 RAB3GAP2Q9H2M9 1393 aa26.72■■□□□ 1.87
PDLIM7-208ENST00000493815 VWDEQ8N2E2 1590 aa26.71■■□□□ 1.87
PDLIM7-208ENST00000493815 C3P01024 1663 aa26.69■■□□□ 1.86
PDLIM7-208ENST00000493815 FAM135AQ9P2D6 1515 aa26.68■■□□□ 1.86
PDLIM7-208ENST00000493815 MROH2AA6NES4 1674 aa26.68■■□□□ 1.86
PDLIM7-208ENST00000493815 ZC3H13Q5T200 1668 aaKnown RBP26.68■■□□□ 1.86
PDLIM7-208ENST00000493815 FBXO31Q5XUX0 539 aaPredicted RBP26.67■■□□□ 1.86
PDLIM7-208ENST00000493815 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
PDLIM7-208ENST00000493815 CAMSAP1Q5T5Y3 1602 aa26.65■■□□□ 1.86
PDLIM7-208ENST00000493815 LMTK2Q8IWU2 1503 aa26.64■■□□□ 1.86
PDLIM7-208ENST00000493815 IQGAP3Q86VI3 1631 aa26.63■■□□□ 1.85
PDLIM7-208ENST00000493815 PCGF6Q9BYE7 350 aa26.63■■□□□ 1.85
PDLIM7-208ENST00000493815 PZPP20742 1482 aa26.62■■□□□ 1.85
PDLIM7-208ENST00000493815 NPATQ14207 1427 aa26.61■■□□□ 1.85
PDLIM7-208ENST00000493815 EFCAB6Q5THR3 1501 aa26.6■■□□□ 1.85
PDLIM7-208ENST00000493815 TET3O43151 1660 aa26.58■■□□□ 1.85
PDLIM7-208ENST00000493815 SLC4A1APQ9BWU0 796 aaKnown RBP26.57■■□□□ 1.84
PDLIM7-208ENST00000493815 ARHGAP31Q2M1Z3 1444 aa26.57■■□□□ 1.84
PDLIM7-208ENST00000493815 CFAP65Q6ZU64 1925 aaKnown RBP26.55■■□□□ 1.84
PDLIM7-208ENST00000493815 PKD2Q13563 968 aa26.54■■□□□ 1.84
PDLIM7-208ENST00000493815 ERVK-7P63135 1459 aa26.53■■□□□ 1.84
PDLIM7-208ENST00000493815 MPHOSPH9Q99550 1183 aa26.53■■□□□ 1.84
PDLIM7-208ENST00000493815 HRCP23327 699 aa26.52■■□□□ 1.84
PDLIM7-208ENST00000493815 E9PCH4 1651 aa26.52■■□□□ 1.84
PDLIM7-208ENST00000493815 TNRQ92752 1358 aa26.52■■□□□ 1.84
PDLIM7-208ENST00000493815 FOXD1Q16676 465 aa26.51■■□□□ 1.83
PDLIM7-208ENST00000493815 PREX1Q8TCU6 1659 aa26.49■■□□□ 1.83
PDLIM7-208ENST00000493815 SPATA31D1Q6ZQQ2 1576 aa26.48■■□□□ 1.83
PDLIM7-208ENST00000493815 RPRD2Q5VT52 1461 aaKnown RBP26.48■■□□□ 1.83
PDLIM7-208ENST00000493815 ACIN1Q9UKV3 1341 aaKnown RBP26.46■■□□□ 1.83
PDLIM7-208ENST00000493815 NOS1P29475 1434 aa26.45■■□□□ 1.83
PDLIM7-208ENST00000493815 UHRF1BP1Q6BDS2 1440 aa26.44■■□□□ 1.82
PDLIM7-208ENST00000493815 SETD1BQ9UPS6 1966 aaKnown RBP26.43■■□□□ 1.82
PDLIM7-208ENST00000493815 SYNMO15061 1565 aa26.42■■□□□ 1.82
PDLIM7-208ENST00000493815 MYO3AQ8NEV4 1616 aa26.42■■□□□ 1.82
PDLIM7-208ENST00000493815 LMTK3Q96Q04 1460 aa26.41■■□□□ 1.82
PDLIM7-208ENST00000493815 HSPA2P54652 639 aa26.4■■□□□ 1.82
PDLIM7-208ENST00000493815 UGGT1Q9NYU2 1555 aa26.39■■□□□ 1.82
PDLIM7-208ENST00000493815 IDI1Q13907 227 aa26.39■■□□□ 1.82
PDLIM7-208ENST00000493815 PLA2R1Q13018 1463 aa26.37■■□□□ 1.81
PDLIM7-208ENST00000493815 PTPRTO14522 1441 aa26.36■■□□□ 1.81
PDLIM7-208ENST00000493815 NLRP1Q9C000 1473 aa26.35■■□□□ 1.81
PDLIM7-208ENST00000493815 CEP170BQ9Y4F5 1589 aaPredicted RBP26.35■■□□□ 1.81
PDLIM7-208ENST00000493815 SPHKAPQ2M3C7 1700 aa26.34■■□□□ 1.81
PDLIM7-208ENST00000493815 A2ML1A8K2U0 1454 aa26.34■■□□□ 1.81
PDLIM7-208ENST00000493815 SLC52A1Q9NWF4 448 aa26.34■■□□□ 1.81
PDLIM7-208ENST00000493815 TRPM2O94759 1503 aa26.3■■□□□ 1.8
PDLIM7-208ENST00000493815 PIK3C2BO00750 1634 aa26.3■■□□□ 1.8
PDLIM7-208ENST00000493815 CHGAP10645 457 aaKnown RBP26.3■■□□□ 1.8
PDLIM7-208ENST00000493815 STAG3Q9UJ98 1225 aa26.3■■□□□ 1.8
PDLIM7-208ENST00000493815 ZNF142P52746 1687 aaPredicted RBP26.29■■□□□ 1.8
PDLIM7-208ENST00000493815 DHX57Q6P158 1386 aaKnown RBP26.26■■□□□ 1.79
PDLIM7-208ENST00000493815 CLTCL1P53675 1640 aa26.26■■□□□ 1.79
PDLIM7-208ENST00000493815 THEMISQ8N1K5 641 aaPredicted RBP26.25■■□□□ 1.79
PDLIM7-208ENST00000493815 ANKRD30BQ9BXX2 1392 aa26.24■■□□□ 1.79
PDLIM7-208ENST00000493815 UBR1Q8IWV7 1749 aa26.24■■□□□ 1.79
PDLIM7-208ENST00000493815 CCDC144AA2RUR9 1427 aa26.23■■□□□ 1.79
PDLIM7-208ENST00000493815 ADGRB3O60242 1522 aa26.21■■□□□ 1.79
PDLIM7-208ENST00000493815 TMEM131LA2VDJ0 1609 aa26.2■■□□□ 1.78
PDLIM7-208ENST00000493815 NCKAP5LQ9HCH0 1330 aa26.18■■□□□ 1.78
PDLIM7-208ENST00000493815 MYO5BQ9ULV0 1848 aa26.17■■□□□ 1.78
PDLIM7-208ENST00000493815 TMEM2Q9UHN6 1383 aa26.15■■□□□ 1.78
PDLIM7-208ENST00000493815 ZNF326Q5BKZ1 582 aaKnown RBP26.15■■□□□ 1.78
PDLIM7-208ENST00000493815 NUTM2DQ5VT03 806 aaPredicted RBP26.15■■□□□ 1.78
PDLIM7-208ENST00000493815 LTKP29376 864 aa26.13■■□□□ 1.77
PDLIM7-208ENST00000493815 RGL3Q3MIN7 710 aa26.13■■□□□ 1.77
PDLIM7-208ENST00000493815 KDM5AP29375 1690 aaKnown RBP26.13■■□□□ 1.77
PDLIM7-208ENST00000493815 SENP3Q9H4L4 574 aaPredicted RBP26.12■■□□□ 1.77
PDLIM7-208ENST00000493815 TXNDC2Q86VQ3 553 aa26.12■■□□□ 1.77
PDLIM7-208ENST00000493815 ANKLE2Q86XL3 938 aa26.12■■□□□ 1.77
PDLIM7-208ENST00000493815 KIF1BO60333 1816 aa26.11■■□□□ 1.77
PDLIM7-208ENST00000493815 ARHGAP23Q9P227 1491 aa26.1■■□□□ 1.77
PDLIM7-208ENST00000493815 SIN3AQ96ST3 1273 aa26.1■■□□□ 1.77
PDLIM7-208ENST00000493815 SLIT1O75093 1534 aa26.1■■□□□ 1.77
PDLIM7-208ENST00000493815 STRCQ7RTU9 1775 aa26.1■■□□□ 1.77
PDLIM7-208ENST00000493815 RIMS2Q9UQ26 1411 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms