RNA–Protein interactions for RNA: ENST00000493673.1

PSMB4-205, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 1,650 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-205ENST00000493673 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.11■■□□□ 1.45
PSMB4-205ENST00000493673 CROCC2H7BZ55 1655 aa24.1■■□□□ 1.45
PSMB4-205ENST00000493673 ADGRL2O95490 1459 aa24.09■■□□□ 1.45
PSMB4-205ENST00000493673 RRBP1Q9P2E9 1410 aaKnown RBP24.08■■□□□ 1.45
PSMB4-205ENST00000493673 ROCK1Q13464 1354 aa24.07■■□□□ 1.44
PSMB4-205ENST00000493673 KANK1Q14678 1352 aa24.07■■□□□ 1.44
PSMB4-205ENST00000493673 PTPRKQ15262 1439 aa24.06■■□□□ 1.44
PSMB4-205ENST00000493673 NPATQ14207 1427 aa24.06■■□□□ 1.44
PSMB4-205ENST00000493673 FAM135AQ9P2D6 1515 aa24.05■■□□□ 1.44
PSMB4-205ENST00000493673 UHRF1BP1Q6BDS2 1440 aa24.05■■□□□ 1.44
PSMB4-205ENST00000493673 EIF2AK4Q9P2K8 1649 aaKnown RBP24.05■■□□□ 1.44
PSMB4-205ENST00000493673 KDM5DQ9BY66 1539 aa24.04■■□□□ 1.44
PSMB4-205ENST00000493673 ANKRD50Q9ULJ7 1429 aa24.03■■□□□ 1.44
PSMB4-205ENST00000493673 MROH2AA6NES4 1674 aa24.03■■□□□ 1.44
PSMB4-205ENST00000493673 CLTCQ00610 1675 aaKnown RBP24.03■■□□□ 1.44
PSMB4-205ENST00000493673 HSPA2P54652 639 aa24.03■■□□□ 1.44
PSMB4-205ENST00000493673 SETD1BQ9UPS6 1966 aaKnown RBP24.03■■□□□ 1.44
PSMB4-205ENST00000493673 C3P01024 1663 aa24.02■■□□□ 1.44
PSMB4-205ENST00000493673 LMTK3Q96Q04 1460 aa24.02■■□□□ 1.44
PSMB4-205ENST00000493673 FBXO31Q5XUX0 539 aaPredicted RBP24.01■■□□□ 1.43
PSMB4-205ENST00000493673 RNF17Q9BXT8 1623 aaKnown RBP23.99■■□□□ 1.43
PSMB4-205ENST00000493673 PZPP20742 1482 aa23.95■■□□□ 1.42
PSMB4-205ENST00000493673 TNRQ92752 1358 aa23.94■■□□□ 1.42
PSMB4-205ENST00000493673 ABCC3O15438 1527 aa23.94■■□□□ 1.42
PSMB4-205ENST00000493673 PREX1Q8TCU6 1659 aa23.92■■□□□ 1.42
PSMB4-205ENST00000493673 DMRT2Q9Y5R5 561 aa23.91■■□□□ 1.42
PSMB4-205ENST00000493673 PRDM15P57071 1507 aaPredicted RBP23.9■■□□□ 1.42
PSMB4-205ENST00000493673 MROH1Q8NDA8 1641 aa23.89■■□□□ 1.41
PSMB4-205ENST00000493673 ZC3H13Q5T200 1668 aaKnown RBP23.88■■□□□ 1.41
PSMB4-205ENST00000493673 ARHGAP31Q2M1Z3 1444 aa23.88■■□□□ 1.41
PSMB4-205ENST00000493673 THEMISQ8N1K5 641 aaPredicted RBP23.86■■□□□ 1.41
PSMB4-205ENST00000493673 NUP155O75694 1391 aa23.85■■□□□ 1.41
PSMB4-205ENST00000493673 DEPDC5O75140 1603 aa23.85■■□□□ 1.41
PSMB4-205ENST00000493673 LMTK2Q8IWU2 1503 aa23.83■■□□□ 1.4
PSMB4-205ENST00000493673 A2ML1A8K2U0 1454 aa23.81■■□□□ 1.4
PSMB4-205ENST00000493673 NLRP1Q9C000 1473 aa23.81■■□□□ 1.4
PSMB4-205ENST00000493673 NAIPQ13075 1403 aa23.8■■□□□ 1.4
PSMB4-205ENST00000493673 ERVK-7P63135 1459 aa23.8■■□□□ 1.4
PSMB4-205ENST00000493673 VWDEQ8N2E2 1590 aa23.8■■□□□ 1.4
PSMB4-205ENST00000493673 PKD2Q13563 968 aa23.79■■□□□ 1.4
PSMB4-205ENST00000493673 CAMSAP1Q5T5Y3 1602 aa23.79■■□□□ 1.4
PSMB4-205ENST00000493673 CEP152O94986 1710 aa23.79■■□□□ 1.4
PSMB4-205ENST00000493673 TRIM52Q96A61 297 aa23.79■■□□□ 1.4
PSMB4-205ENST00000493673 STAG3Q9UJ98 1225 aa23.78■■□□□ 1.4
PSMB4-205ENST00000493673 HFM1A2PYH4 1435 aa23.78■■□□□ 1.4
PSMB4-205ENST00000493673 SPATA31D1Q6ZQQ2 1576 aa23.77■■□□□ 1.4
PSMB4-205ENST00000493673 CEP170BQ9Y4F5 1589 aaPredicted RBP23.77■■□□□ 1.4
PSMB4-205ENST00000493673 MYO3AQ8NEV4 1616 aa23.76■■□□□ 1.39
PSMB4-205ENST00000493673 SLC52A1Q9NWF4 448 aa23.76■■□□□ 1.39
PSMB4-205ENST00000493673 NCKAP5LQ9HCH0 1330 aa23.75■■□□□ 1.39
PSMB4-205ENST00000493673 ANKLE2Q86XL3 938 aa23.75■■□□□ 1.39
PSMB4-205ENST00000493673 RPRD2Q5VT52 1461 aaKnown RBP23.73■■□□□ 1.39
PSMB4-205ENST00000493673 IDI1Q13907 227 aa23.73■■□□□ 1.39
PSMB4-205ENST00000493673 ACIN1Q9UKV3 1341 aaKnown RBP23.72■■□□□ 1.39
PSMB4-205ENST00000493673 UNC13BO14795 1591 aa23.72■■□□□ 1.39
PSMB4-205ENST00000493673 PLA2R1Q13018 1463 aa23.71■■□□□ 1.39
PSMB4-205ENST00000493673 EFCAB6Q5THR3 1501 aa23.71■■□□□ 1.39
PSMB4-205ENST00000493673 UGGT1Q9NYU2 1555 aa23.71■■□□□ 1.39
PSMB4-205ENST00000493673 CFAP65Q6ZU64 1925 aaKnown RBP23.7■■□□□ 1.38
PSMB4-205ENST00000493673 PTPRTO14522 1441 aa23.69■■□□□ 1.38
PSMB4-205ENST00000493673 ZNF142P52746 1687 aaPredicted RBP23.69■■□□□ 1.38
PSMB4-205ENST00000493673 NOS1P29475 1434 aa23.68■■□□□ 1.38
PSMB4-205ENST00000493673 SLC4A1APQ9BWU0 796 aaKnown RBP23.66■■□□□ 1.38
PSMB4-205ENST00000493673 EID1Q9Y6B2 187 aa23.66■■□□□ 1.38
PSMB4-205ENST00000493673 TET3O43151 1660 aa23.66■■□□□ 1.38
PSMB4-205ENST00000493673 IQGAP3Q86VI3 1631 aa23.64■■□□□ 1.38
PSMB4-205ENST00000493673 STRCQ7RTU9 1775 aa23.63■■□□□ 1.37
PSMB4-205ENST00000493673 TXNDC2Q86VQ3 553 aa23.63■■□□□ 1.37
PSMB4-205ENST00000493673 SETD5Q9C0A6 1442 aa23.63■■□□□ 1.37
PSMB4-205ENST00000493673 GCC2Q8IWJ2 1684 aa23.62■■□□□ 1.37
PSMB4-205ENST00000493673 CHGAP10645 457 aaKnown RBP23.62■■□□□ 1.37
PSMB4-205ENST00000493673 HDGFP51858 240 aaKnown RBP23.62■■□□□ 1.37
PSMB4-205ENST00000493673 TMEM2Q9UHN6 1383 aa23.56■■□□□ 1.36
PSMB4-205ENST00000493673 SYNMO15061 1565 aa23.56■■□□□ 1.36
PSMB4-205ENST00000493673 LTKP29376 864 aa23.55■■□□□ 1.36
PSMB4-205ENST00000493673 MPHOSPH9Q99550 1183 aa23.55■■□□□ 1.36
PSMB4-205ENST00000493673 CERKQ8TCT0 537 aa23.54■■□□□ 1.36
PSMB4-205ENST00000493673 E9PCH4 1651 aa23.54■■□□□ 1.36
PSMB4-205ENST00000493673 NPHP4O75161 1426 aaPredicted RBP23.53■■□□□ 1.36
PSMB4-205ENST00000493673 HRCP23327 699 aa23.53■■□□□ 1.36
PSMB4-205ENST00000493673 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.52■■□□□ 1.36
PSMB4-205ENST00000493673 PIK3C2BO00750 1634 aa23.52■■□□□ 1.36
PSMB4-205ENST00000493673 UBR1Q8IWV7 1749 aa23.51■■□□□ 1.35
PSMB4-205ENST00000493673 BCANQ96GW7 911 aa23.51■■□□□ 1.35
PSMB4-205ENST00000493673 RAB3GAP2Q9H2M9 1393 aa23.5■■□□□ 1.35
PSMB4-205ENST00000493673 MED14O60244 1454 aa23.5■■□□□ 1.35
PSMB4-205ENST00000493673 PPP1R15AO75807 674 aaPredicted RBP23.5■■□□□ 1.35
PSMB4-205ENST00000493673 SCAF11Q99590 1463 aaKnown RBP23.5■■□□□ 1.35
PSMB4-205ENST00000493673 ARHGAP23Q9P227 1491 aa23.5■■□□□ 1.35
PSMB4-205ENST00000493673 SLIT1O75093 1534 aa23.5■■□□□ 1.35
PSMB4-205ENST00000493673 ZNF335Q9H4Z2 1342 aaPredicted RBP23.48■■□□□ 1.35
PSMB4-205ENST00000493673 ZNF326Q5BKZ1 582 aaKnown RBP23.48■■□□□ 1.35
PSMB4-205ENST00000493673 ADGRB3O60242 1522 aa23.47■■□□□ 1.35
PSMB4-205ENST00000493673 KDM5AP29375 1690 aaKnown RBP23.46■■□□□ 1.35
PSMB4-205ENST00000493673 FOXD1Q16676 465 aa23.46■■□□□ 1.35
PSMB4-205ENST00000493673 RIMS2Q9UQ26 1411 aa23.43■■□□□ 1.34
PSMB4-205ENST00000493673 NEURL4Q96JN8 1562 aa23.43■■□□□ 1.34
PSMB4-205ENST00000493673 POLR1AO95602 1720 aaPredicted RBP23.42■■□□□ 1.34
PSMB4-205ENST00000493673 FBXO41Q8TF61 875 aa23.41■■□□□ 1.34
PSMB4-205ENST00000493673 NUTM2DQ5VT03 806 aaPredicted RBP23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms