RNA–Protein interactions for RNA: ENST00000493653.1

PDS5B-208, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 1 (best)

Gene PDS5B, Length 972 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-208ENST00000493653 CERKQ8TCT0 537 aa18.69■□□□□ 0.58
PDS5B-208ENST00000493653 DMRT2Q9Y5R5 561 aa18.69■□□□□ 0.58
PDS5B-208ENST00000493653 PTPRTO14522 1441 aa18.68■□□□□ 0.58
PDS5B-208ENST00000493653 FAM135AQ9P2D6 1515 aa18.68■□□□□ 0.58
PDS5B-208ENST00000493653 MAST1Q9Y2H9 1570 aa18.67■□□□□ 0.58
PDS5B-208ENST00000493653 MYOM3Q5VTT5 1437 aa18.66■□□□□ 0.58
PDS5B-208ENST00000493653 KANK4Q5T7N3 995 aaPredicted RBP18.65■□□□□ 0.58
PDS5B-208ENST00000493653 KIF3BO15066 747 aa18.63■□□□□ 0.57
PDS5B-208ENST00000493653 RSPH4AQ5TD94 716 aa18.63■□□□□ 0.57
PDS5B-208ENST00000493653 PLA2R1Q13018 1463 aa18.63■□□□□ 0.57
PDS5B-208ENST00000493653 RNF17Q9BXT8 1623 aaKnown RBP18.63■□□□□ 0.57
PDS5B-208ENST00000493653 SLC4A1APQ9BWU0 796 aaKnown RBP18.62■□□□□ 0.57
PDS5B-208ENST00000493653 MIA2Q96PC5 1412 aa18.62■□□□□ 0.57
PDS5B-208ENST00000493653 PZPP20742 1482 aa18.62■□□□□ 0.57
PDS5B-208ENST00000493653 CROCC2H7BZ55 1655 aa18.61■□□□□ 0.57
PDS5B-208ENST00000493653 EIF2AK4Q9P2K8 1649 aaKnown RBP18.61■□□□□ 0.57
PDS5B-208ENST00000493653 A2ML1A8K2U0 1454 aa18.6■□□□□ 0.57
PDS5B-208ENST00000493653 TSPY4P0CV99 314 aa18.6■□□□□ 0.57
PDS5B-208ENST00000493653 TSPY10P0CW01 314 aa18.6■□□□□ 0.57
PDS5B-208ENST00000493653 LTBP4Q8N2S1 1624 aa18.6■□□□□ 0.57
PDS5B-208ENST00000493653 TCOF1Q13428 1488 aaKnown RBP18.59■□□□□ 0.57
PDS5B-208ENST00000493653 ZC3H13Q5T200 1668 aaKnown RBP18.59■□□□□ 0.57
PDS5B-208ENST00000493653 DNMT1P26358 1616 aaKnown RBP18.59■□□□□ 0.57
PDS5B-208ENST00000493653 PTPN23Q9H3S7 1636 aa18.58■□□□□ 0.56
PDS5B-208ENST00000493653 TNRQ92752 1358 aa18.57■□□□□ 0.56
PDS5B-208ENST00000493653 ABCC3O15438 1527 aa18.57■□□□□ 0.56
PDS5B-208ENST00000493653 MROH1Q8NDA8 1641 aa18.56■□□□□ 0.56
PDS5B-208ENST00000493653 NCKAP5LQ9HCH0 1330 aa18.56■□□□□ 0.56
PDS5B-208ENST00000493653 SHANK2Q9UPX8 1470 aa18.56■□□□□ 0.56
PDS5B-208ENST00000493653 WASHC2CQ9Y4E1 1318 aa18.55■□□□□ 0.56
PDS5B-208ENST00000493653 POLR1AO95602 1720 aaPredicted RBP18.55■□□□□ 0.56
PDS5B-208ENST00000493653 DUOX2Q9NRD8 1548 aa18.54■□□□□ 0.56
PDS5B-208ENST00000493653 CEP152O94986 1710 aa18.53■□□□□ 0.56
PDS5B-208ENST00000493653 APLP2Q06481 763 aa18.53■□□□□ 0.56
PDS5B-208ENST00000493653 FBXO31Q5XUX0 539 aaPredicted RBP18.53■□□□□ 0.56
PDS5B-208ENST00000493653 PKD2Q13563 968 aa18.52■□□□□ 0.56
PDS5B-208ENST00000493653 IQSEC2Q5JU85 1478 aa18.52■□□□□ 0.55
PDS5B-208ENST00000493653 NEURL4Q96JN8 1562 aa18.51■□□□□ 0.55
PDS5B-208ENST00000493653 FGD6Q6ZV73 1430 aa18.51■□□□□ 0.55
PDS5B-208ENST00000493653 PRDM15P57071 1507 aaPredicted RBP18.5■□□□□ 0.55
PDS5B-208ENST00000493653 KIF15Q9NS87 1388 aa18.5■□□□□ 0.55
PDS5B-208ENST00000493653 NLRP1Q9C000 1473 aa18.5■□□□□ 0.55
PDS5B-208ENST00000493653 SPATA31D1Q6ZQQ2 1576 aa18.5■□□□□ 0.55
PDS5B-208ENST00000493653 ZNF335Q9H4Z2 1342 aaPredicted RBP18.49■□□□□ 0.55
PDS5B-208ENST00000493653 ABCC5O15440 1437 aa18.49■□□□□ 0.55
PDS5B-208ENST00000493653 DAPK1P53355 1430 aa18.49■□□□□ 0.55
PDS5B-208ENST00000493653 UGGT1Q9NYU2 1555 aa18.48■□□□□ 0.55
PDS5B-208ENST00000493653 ERVK-7P63135 1459 aa18.48■□□□□ 0.55
PDS5B-208ENST00000493653 ERBINQ96RT1 1412 aa18.48■□□□□ 0.55
PDS5B-208ENST00000493653 DEPDC5O75140 1603 aa18.45■□□□□ 0.54
PDS5B-208ENST00000493653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.43■□□□□ 0.54
PDS5B-208ENST00000493653 IQGAP1P46940 1657 aa18.41■□□□□ 0.54
PDS5B-208ENST00000493653 RRP7BPQ9NSQ0 103 aa18.4■□□□□ 0.54
PDS5B-208ENST00000493653 UBR1Q8IWV7 1749 aa18.39■□□□□ 0.53
PDS5B-208ENST00000493653 ANKRD30AQ9BXX3 1397 aa18.38■□□□□ 0.53
PDS5B-208ENST00000493653 NPHP4O75161 1426 aaPredicted RBP18.38■□□□□ 0.53
PDS5B-208ENST00000493653 CPS1P31327 1500 aa18.38■□□□□ 0.53
PDS5B-208ENST00000493653 VWDEQ8N2E2 1590 aa18.38■□□□□ 0.53
PDS5B-208ENST00000493653 THEMISQ8N1K5 641 aaPredicted RBP18.37■□□□□ 0.53
PDS5B-208ENST00000493653 MED14O60244 1454 aa18.36■□□□□ 0.53
PDS5B-208ENST00000493653 ARHGAP31Q2M1Z3 1444 aa18.36■□□□□ 0.53
PDS5B-208ENST00000493653 CFAP65Q6ZU64 1925 aaKnown RBP18.36■□□□□ 0.53
PDS5B-208ENST00000493653 ANKLE2Q86XL3 938 aa18.36■□□□□ 0.53
PDS5B-208ENST00000493653 RTN4Q9NQC3 1192 aaKnown RBP18.36■□□□□ 0.53
PDS5B-208ENST00000493653 CHIC2Q9UKJ5 165 aa18.36■□□□□ 0.53
PDS5B-208ENST00000493653 ADGRL2O95490 1459 aa18.35■□□□□ 0.53
PDS5B-208ENST00000493653 KANK1Q14678 1352 aa18.34■□□□□ 0.53
PDS5B-208ENST00000493653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.53
PDS5B-208ENST00000493653 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.53
PDS5B-208ENST00000493653 UBAP1LF5GYI3 381 aa18.33■□□□□ 0.52
PDS5B-208ENST00000493653 PIK3C2BO00750 1634 aa18.33■□□□□ 0.52
PDS5B-208ENST00000493653 EFCAB6Q5THR3 1501 aa18.33■□□□□ 0.52
PDS5B-208ENST00000493653 FAM50AQ14320 339 aaKnown RBP18.31■□□□□ 0.52
PDS5B-208ENST00000493653 SCAF11Q99590 1463 aaKnown RBP18.31■□□□□ 0.52
PDS5B-208ENST00000493653 SYNMO15061 1565 aa18.3■□□□□ 0.52
PDS5B-208ENST00000493653 DISP3Q9P2K9 1392 aa18.3■□□□□ 0.52
PDS5B-208ENST00000493653 SLIT1O75093 1534 aa18.29■□□□□ 0.52
PDS5B-208ENST00000493653 ARHGAP23Q9P227 1491 aa18.28■□□□□ 0.52
PDS5B-208ENST00000493653 STRCP1A6NGW2 1772 aa18.27■□□□□ 0.52
PDS5B-208ENST00000493653 ANKRD50Q9ULJ7 1429 aa18.26■□□□□ 0.51
PDS5B-208ENST00000493653 KDM5AP29375 1690 aaKnown RBP18.25■□□□□ 0.51
PDS5B-208ENST00000493653 SCAF1Q9H7N4 1312 aaKnown RBP18.24■□□□□ 0.51
PDS5B-208ENST00000493653 ADGRB3O60242 1522 aa18.24■□□□□ 0.51
PDS5B-208ENST00000493653 UNC13BO14795 1591 aa18.23■□□□□ 0.51
PDS5B-208ENST00000493653 AMER1Q5JTC6 1135 aaPredicted RBP18.23■□□□□ 0.51
PDS5B-208ENST00000493653 TET3O43151 1660 aa18.22■□□□□ 0.51
PDS5B-208ENST00000493653 NOS1P29475 1434 aa18.22■□□□□ 0.51
PDS5B-208ENST00000493653 TMEM2Q9UHN6 1383 aa18.21■□□□□ 0.51
PDS5B-208ENST00000493653 ALKQ9UM73 1620 aa18.21■□□□□ 0.51
PDS5B-208ENST00000493653 LRRC7Q96NW7 1537 aa18.21■□□□□ 0.51
PDS5B-208ENST00000493653 GCC2Q8IWJ2 1684 aa18.2■□□□□ 0.5
PDS5B-208ENST00000493653 LTKP29376 864 aa18.2■□□□□ 0.5
PDS5B-208ENST00000493653 PIP4K2BP78356 416 aa18.2■□□□□ 0.5
PDS5B-208ENST00000493653 STAG3Q9UJ98 1225 aa18.2■□□□□ 0.5
PDS5B-208ENST00000493653 RPRD2Q5VT52 1461 aaKnown RBP18.2■□□□□ 0.5
PDS5B-208ENST00000493653 TOM1O60784 492 aa18.18■□□□□ 0.5
PDS5B-208ENST00000493653 TXNDC2Q86VQ3 553 aa18.18■□□□□ 0.5
PDS5B-208ENST00000493653 EID1Q9Y6B2 187 aa18.17■□□□□ 0.5
PDS5B-208ENST00000493653 IDI1Q13907 227 aa18.15■□□□□ 0.5
PDS5B-208ENST00000493653 IQGAP3Q86VI3 1631 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms