RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 GCC2Q8IWJ2 1684 aa18.24■□□□□ 0.51
RHBDF1-211ENST00000493647 MADDQ8WXG6 1647 aa18.2■□□□□ 0.5
RHBDF1-211ENST00000493647 SETD5Q9C0A6 1442 aa18.2■□□□□ 0.5
RHBDF1-211ENST00000493647 DEPDC5O75140 1603 aa18.2■□□□□ 0.5
RHBDF1-211ENST00000493647 PRDM15P57071 1507 aaPredicted RBP18.19■□□□□ 0.5
RHBDF1-211ENST00000493647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.5
RHBDF1-211ENST00000493647 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
RHBDF1-211ENST00000493647 UNC13BO14795 1591 aa18.17■□□□□ 0.5
RHBDF1-211ENST00000493647 VWDEQ8N2E2 1590 aa18.17■□□□□ 0.5
RHBDF1-211ENST00000493647 ABCC3O15438 1527 aa18.16■□□□□ 0.5
RHBDF1-211ENST00000493647 KDM5DQ9BY66 1539 aa18.16■□□□□ 0.5
RHBDF1-211ENST00000493647 RAB3GAP2Q9H2M9 1393 aa18.16■□□□□ 0.5
RHBDF1-211ENST00000493647 WASHC2CQ9Y4E1 1318 aa18.14■□□□□ 0.49
RHBDF1-211ENST00000493647 FER1L4A9Z1Z3 1794 aa18.14■□□□□ 0.49
RHBDF1-211ENST00000493647 FAM135AQ9P2D6 1515 aa18.13■□□□□ 0.49
RHBDF1-211ENST00000493647 RIMS1Q86UR5 1692 aaKnown RBP18.13■□□□□ 0.49
RHBDF1-211ENST00000493647 NUP155O75694 1391 aa18.13■□□□□ 0.49
RHBDF1-211ENST00000493647 CNTLNQ9NXG0 1405 aa18.13■□□□□ 0.49
RHBDF1-211ENST00000493647 KANK1Q14678 1352 aa18.12■□□□□ 0.49
RHBDF1-211ENST00000493647 PTPRMP28827 1452 aa18.12■□□□□ 0.49
RHBDF1-211ENST00000493647 CLTCQ00610 1675 aaKnown RBP18.12■□□□□ 0.49
RHBDF1-211ENST00000493647 ESF1Q9H501 851 aaKnown RBP18.11■□□□□ 0.49
RHBDF1-211ENST00000493647 LMTK2Q8IWU2 1503 aa18.11■□□□□ 0.49
RHBDF1-211ENST00000493647 ZMYM3Q14202 1370 aa18.1■□□□□ 0.49
RHBDF1-211ENST00000493647 CEBPAP49715 358 aaPredicted RBP18.1■□□□□ 0.49
RHBDF1-211ENST00000493647 CEP152O94986 1710 aa18.09■□□□□ 0.49
RHBDF1-211ENST00000493647 IQGAP3Q86VI3 1631 aa18.09■□□□□ 0.49
RHBDF1-211ENST00000493647 PZPP20742 1482 aa18.08■□□□□ 0.49
RHBDF1-211ENST00000493647 TRIM52Q96A61 297 aa18.08■□□□□ 0.48
RHBDF1-211ENST00000493647 PCGF6Q9BYE7 350 aa18.08■□□□□ 0.48
RHBDF1-211ENST00000493647 ZC3H13Q5T200 1668 aaKnown RBP18.08■□□□□ 0.48
RHBDF1-211ENST00000493647 MROH2AA6NES4 1674 aa18.07■□□□□ 0.48
RHBDF1-211ENST00000493647 HRCP23327 699 aa18.06■□□□□ 0.48
RHBDF1-211ENST00000493647 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
RHBDF1-211ENST00000493647 CAMSAP1Q5T5Y3 1602 aa18.05■□□□□ 0.48
RHBDF1-211ENST00000493647 FBXO31Q5XUX0 539 aaPredicted RBP18.05■□□□□ 0.48
RHBDF1-211ENST00000493647 C3P01024 1663 aa18.05■□□□□ 0.48
RHBDF1-211ENST00000493647 NPATQ14207 1427 aa18.05■□□□□ 0.48
RHBDF1-211ENST00000493647 ARHGAP31Q2M1Z3 1444 aa18.05■□□□□ 0.48
RHBDF1-211ENST00000493647 EFCAB6Q5THR3 1501 aa18.04■□□□□ 0.48
RHBDF1-211ENST00000493647 TET3O43151 1660 aa18.03■□□□□ 0.48
RHBDF1-211ENST00000493647 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
RHBDF1-211ENST00000493647 ERVK-7P63135 1459 aa18■□□□□ 0.47
RHBDF1-211ENST00000493647 PKD2Q13563 968 aa17.99■□□□□ 0.47
RHBDF1-211ENST00000493647 MPHOSPH9Q99550 1183 aa17.99■□□□□ 0.47
RHBDF1-211ENST00000493647 ACIN1Q9UKV3 1341 aaKnown RBP17.98■□□□□ 0.47
RHBDF1-211ENST00000493647 E9PCH4 1651 aa17.98■□□□□ 0.47
RHBDF1-211ENST00000493647 RPRD2Q5VT52 1461 aaKnown RBP17.97■□□□□ 0.47
RHBDF1-211ENST00000493647 NOS1P29475 1434 aa17.97■□□□□ 0.47
RHBDF1-211ENST00000493647 SPATA31D1Q6ZQQ2 1576 aa17.96■□□□□ 0.47
RHBDF1-211ENST00000493647 TNRQ92752 1358 aa17.96■□□□□ 0.47
RHBDF1-211ENST00000493647 FOXD1Q16676 465 aa17.96■□□□□ 0.47
RHBDF1-211ENST00000493647 PREX1Q8TCU6 1659 aa17.94■□□□□ 0.46
RHBDF1-211ENST00000493647 PLA2R1Q13018 1463 aa17.94■□□□□ 0.46
RHBDF1-211ENST00000493647 SYNMO15061 1565 aa17.93■□□□□ 0.46
RHBDF1-211ENST00000493647 PTPRTO14522 1441 aa17.93■□□□□ 0.46
RHBDF1-211ENST00000493647 UGGT1Q9NYU2 1555 aa17.89■□□□□ 0.45
RHBDF1-211ENST00000493647 CFAP65Q6ZU64 1925 aaKnown RBP17.89■□□□□ 0.45
RHBDF1-211ENST00000493647 DHX57Q6P158 1386 aaKnown RBP17.89■□□□□ 0.45
RHBDF1-211ENST00000493647 AEBP2Q6ZN18 517 aaPredicted RBP17.88■□□□□ 0.45
RHBDF1-211ENST00000493647 MYO3AQ8NEV4 1616 aa17.87■□□□□ 0.45
RHBDF1-211ENST00000493647 UHRF1BP1Q6BDS2 1440 aa17.87■□□□□ 0.45
RHBDF1-211ENST00000493647 IDI1Q13907 227 aa17.86■□□□□ 0.45
RHBDF1-211ENST00000493647 LMTK3Q96Q04 1460 aa17.86■□□□□ 0.45
RHBDF1-211ENST00000493647 NLRP1Q9C000 1473 aa17.86■□□□□ 0.45
RHBDF1-211ENST00000493647 TRPM2O94759 1503 aa17.86■□□□□ 0.45
RHBDF1-211ENST00000493647 A2ML1A8K2U0 1454 aa17.85■□□□□ 0.45
RHBDF1-211ENST00000493647 SPHKAPQ2M3C7 1700 aa17.85■□□□□ 0.45
RHBDF1-211ENST00000493647 ANKRD30BQ9BXX2 1392 aa17.85■□□□□ 0.45
RHBDF1-211ENST00000493647 SLC52A1Q9NWF4 448 aa17.84■□□□□ 0.45
RHBDF1-211ENST00000493647 SETD1BQ9UPS6 1966 aaKnown RBP17.84■□□□□ 0.45
RHBDF1-211ENST00000493647 PIK3C2BO00750 1634 aa17.83■□□□□ 0.45
RHBDF1-211ENST00000493647 CEP170BQ9Y4F5 1589 aaPredicted RBP17.83■□□□□ 0.45
RHBDF1-211ENST00000493647 CLTCL1P53675 1640 aa17.82■□□□□ 0.44
RHBDF1-211ENST00000493647 ZNF142P52746 1687 aaPredicted RBP17.81■□□□□ 0.44
RHBDF1-211ENST00000493647 HSPA2P54652 639 aa17.8■□□□□ 0.44
RHBDF1-211ENST00000493647 CCDC144AA2RUR9 1427 aa17.78■□□□□ 0.44
RHBDF1-211ENST00000493647 ADGRB3O60242 1522 aa17.77■□□□□ 0.44
RHBDF1-211ENST00000493647 UBR1Q8IWV7 1749 aa17.76■□□□□ 0.43
RHBDF1-211ENST00000493647 TMEM131LA2VDJ0 1609 aa17.76■□□□□ 0.43
RHBDF1-211ENST00000493647 CHGAP10645 457 aaKnown RBP17.75■□□□□ 0.43
RHBDF1-211ENST00000493647 STAG3Q9UJ98 1225 aa17.74■□□□□ 0.43
RHBDF1-211ENST00000493647 SPATA31E1Q6ZUB1 1445 aa17.73■□□□□ 0.43
RHBDF1-211ENST00000493647 THEMISQ8N1K5 641 aaPredicted RBP17.73■□□□□ 0.43
RHBDF1-211ENST00000493647 ARHGAP23Q9P227 1491 aa17.72■□□□□ 0.43
RHBDF1-211ENST00000493647 KDM5AP29375 1690 aaKnown RBP17.71■□□□□ 0.43
RHBDF1-211ENST00000493647 TMEM2Q9UHN6 1383 aa17.71■□□□□ 0.43
RHBDF1-211ENST00000493647 SIN3AQ96ST3 1273 aa17.71■□□□□ 0.43
RHBDF1-211ENST00000493647 SLIT1O75093 1534 aa17.7■□□□□ 0.42
RHBDF1-211ENST00000493647 ZFYVE9O95405 1425 aa17.7■□□□□ 0.42
RHBDF1-211ENST00000493647 LTKP29376 864 aa17.69■□□□□ 0.42
RHBDF1-211ENST00000493647 MYO5BQ9ULV0 1848 aa17.69■□□□□ 0.42
RHBDF1-211ENST00000493647 RIMS2Q9UQ26 1411 aa17.68■□□□□ 0.42
RHBDF1-211ENST00000493647 NCKAP5LQ9HCH0 1330 aa17.68■□□□□ 0.42
RHBDF1-211ENST00000493647 RGL3Q3MIN7 710 aa17.67■□□□□ 0.42
RHBDF1-211ENST00000493647 NEURL4Q96JN8 1562 aa17.66■□□□□ 0.42
RHBDF1-211ENST00000493647 KIF1BO60333 1816 aa17.66■□□□□ 0.42
RHBDF1-211ENST00000493647 ZNF326Q5BKZ1 582 aaKnown RBP17.66■□□□□ 0.42
RHBDF1-211ENST00000493647 NUTM2DQ5VT03 806 aaPredicted RBP17.65■□□□□ 0.42
RHBDF1-211ENST00000493647 NEXMIFQ5QGS0 1516 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms