RNA–Protein interactions for RNA: ENST00000493213.1

CDK16-207, Transcript of cyclin dependent kinase 16, humanhuman

TSL 3

Gene CDK16, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-207ENST00000493213 TIAM1Q13009 1591 aa16.77■□□□□ 0.27
CDK16-207ENST00000493213 MYCNP04198 464 aaPredicted RBP16.76■□□□□ 0.27
CDK16-207ENST00000493213 SAMD1Q6SPF0 538 aaPredicted RBP16.76■□□□□ 0.27
CDK16-207ENST00000493213 ZMYM3Q14202 1370 aa16.76■□□□□ 0.27
CDK16-207ENST00000493213 ADGBQ8N7X0 1667 aa16.73■□□□□ 0.27
CDK16-207ENST00000493213 STRCQ7RTU9 1775 aa16.73■□□□□ 0.27
CDK16-207ENST00000493213 DHX29Q7Z478 1369 aaKnown RBP16.71■□□□□ 0.27
CDK16-207ENST00000493213 FAM135AQ9P2D6 1515 aa16.7■□□□□ 0.26
CDK16-207ENST00000493213 SUPT6HQ7KZ85 1726 aaKnown RBP16.7■□□□□ 0.26
CDK16-207ENST00000493213 ZNF644Q9H582 1327 aaPredicted RBP16.7■□□□□ 0.26
CDK16-207ENST00000493213 NCOA2Q15596 1464 aa16.69■□□□□ 0.26
CDK16-207ENST00000493213 MAP3K1Q13233 1512 aa16.69■□□□□ 0.26
CDK16-207ENST00000493213 NCOA1Q15788 1441 aa16.69■□□□□ 0.26
CDK16-207ENST00000493213 CCDC141Q6ZP82 1450 aa16.68■□□□□ 0.26
CDK16-207ENST00000493213 POTEHQ6S545 545 aa16.68■□□□□ 0.26
CDK16-207ENST00000493213 VPS8Q8N3P4 1428 aa16.68■□□□□ 0.26
CDK16-207ENST00000493213 PTPRKQ15262 1439 aa16.67■□□□□ 0.26
CDK16-207ENST00000493213 GGT6Q6P531 493 aa16.66■□□□□ 0.26
CDK16-207ENST00000493213 ILDR2Q71H61 639 aa16.66■□□□□ 0.26
CDK16-207ENST00000493213 ARHGEF5Q12774 1597 aa16.65■□□□□ 0.26
CDK16-207ENST00000493213 CAMSAP2Q08AD1 1489 aa16.65■□□□□ 0.26
CDK16-207ENST00000493213 PLA2R1Q13018 1463 aa16.65■□□□□ 0.26
CDK16-207ENST00000493213 IQSEC2Q5JU85 1478 aa16.65■□□□□ 0.26
CDK16-207ENST00000493213 PKD2Q13563 968 aa16.64■□□□□ 0.25
CDK16-207ENST00000493213 LRRC9Q6ZRR7 1453 aa16.64■□□□□ 0.25
CDK16-207ENST00000493213 CLTCQ00610 1675 aaKnown RBP16.64■□□□□ 0.25
CDK16-207ENST00000493213 TSPY4P0CV99 314 aa16.63■□□□□ 0.25
CDK16-207ENST00000493213 TSPY10P0CW01 314 aa16.63■□□□□ 0.25
CDK16-207ENST00000493213 ZNF142P52746 1687 aaPredicted RBP16.62■□□□□ 0.25
CDK16-207ENST00000493213 CAMSAP1Q5T5Y3 1602 aa16.61■□□□□ 0.25
CDK16-207ENST00000493213 MIA2Q96PC5 1412 aa16.61■□□□□ 0.25
CDK16-207ENST00000493213 KIF3BO15066 747 aa16.59■□□□□ 0.25
CDK16-207ENST00000493213 ZNF219Q9P2Y4 722 aaPredicted RBP16.59■□□□□ 0.25
CDK16-207ENST00000493213 TCOF1Q13428 1488 aaKnown RBP16.59■□□□□ 0.25
CDK16-207ENST00000493213 CEP170BQ9Y4F5 1589 aaPredicted RBP16.59■□□□□ 0.25
CDK16-207ENST00000493213 LTBP4Q8N2S1 1624 aa16.59■□□□□ 0.25
CDK16-207ENST00000493213 MYO3AQ8NEV4 1616 aa16.59■□□□□ 0.25
CDK16-207ENST00000493213 A2ML1A8K2U0 1454 aa16.58■□□□□ 0.24
CDK16-207ENST00000493213 MAST1Q9Y2H9 1570 aa16.57■□□□□ 0.24
CDK16-207ENST00000493213 KDM5DQ9BY66 1539 aa16.57■□□□□ 0.24
CDK16-207ENST00000493213 PZPP20742 1482 aa16.57■□□□□ 0.24
CDK16-207ENST00000493213 LOC105371045A0A1W2PR82 267 aa16.57■□□□□ 0.24
CDK16-207ENST00000493213 DISP3Q9P2K9 1392 aa16.56■□□□□ 0.24
CDK16-207ENST00000493213 WASHC2CQ9Y4E1 1318 aa16.55■□□□□ 0.24
CDK16-207ENST00000493213 MYOM3Q5VTT5 1437 aa16.54■□□□□ 0.24
CDK16-207ENST00000493213 ZBTB22O15209 634 aa16.54■□□□□ 0.24
CDK16-207ENST00000493213 TNRQ92752 1358 aa16.53■□□□□ 0.24
CDK16-207ENST00000493213 NCKAP5LQ9HCH0 1330 aa16.52■□□□□ 0.24
CDK16-207ENST00000493213 NLRP1Q9C000 1473 aa16.52■□□□□ 0.23
CDK16-207ENST00000493213 DNMT1P26358 1616 aaKnown RBP16.52■□□□□ 0.23
CDK16-207ENST00000493213 KANK4Q5T7N3 995 aaPredicted RBP16.51■□□□□ 0.23
CDK16-207ENST00000493213 RNF17Q9BXT8 1623 aaKnown RBP16.51■□□□□ 0.23
CDK16-207ENST00000493213 EIF2AK4Q9P2K8 1649 aaKnown RBP16.51■□□□□ 0.23
CDK16-207ENST00000493213 THEMISQ8N1K5 641 aaPredicted RBP16.5■□□□□ 0.23
CDK16-207ENST00000493213 SOCS7O14512 581 aa16.48■□□□□ 0.23
CDK16-207ENST00000493213 FBXO31Q5XUX0 539 aaPredicted RBP16.48■□□□□ 0.23
CDK16-207ENST00000493213 ZC3H13Q5T200 1668 aaKnown RBP16.48■□□□□ 0.23
CDK16-207ENST00000493213 SPATA31D1Q6ZQQ2 1576 aa16.47■□□□□ 0.23
CDK16-207ENST00000493213 SHANK2Q9UPX8 1470 aa16.47■□□□□ 0.23
CDK16-207ENST00000493213 DUOX2Q9NRD8 1548 aa16.46■□□□□ 0.23
CDK16-207ENST00000493213 ANKLE2Q86XL3 938 aa16.46■□□□□ 0.23
CDK16-207ENST00000493213 ZNF335Q9H4Z2 1342 aaPredicted RBP16.45■□□□□ 0.22
CDK16-207ENST00000493213 ABCC3O15438 1527 aa16.45■□□□□ 0.22
CDK16-207ENST00000493213 MED14O60244 1454 aa16.44■□□□□ 0.22
CDK16-207ENST00000493213 ERBINQ96RT1 1412 aa16.43■□□□□ 0.22
CDK16-207ENST00000493213 UGGT1Q9NYU2 1555 aa16.43■□□□□ 0.22
CDK16-207ENST00000493213 DEPDC5O75140 1603 aa16.42■□□□□ 0.22
CDK16-207ENST00000493213 ARHGAP31Q2M1Z3 1444 aa16.42■□□□□ 0.22
CDK16-207ENST00000493213 CPS1P31327 1500 aa16.41■□□□□ 0.22
CDK16-207ENST00000493213 ABCC5O15440 1437 aa16.41■□□□□ 0.22
CDK16-207ENST00000493213 POLR1AO95602 1720 aaPredicted RBP16.41■□□□□ 0.22
CDK16-207ENST00000493213 NEURL4Q96JN8 1562 aa16.4■□□□□ 0.22
CDK16-207ENST00000493213 MROH1Q8NDA8 1641 aa16.4■□□□□ 0.22
CDK16-207ENST00000493213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.39■□□□□ 0.21
CDK16-207ENST00000493213 KIF15Q9NS87 1388 aa16.39■□□□□ 0.21
CDK16-207ENST00000493213 PTPN23Q9H3S7 1636 aa16.39■□□□□ 0.21
CDK16-207ENST00000493213 ABCB7O75027 752 aa16.39■□□□□ 0.21
CDK16-207ENST00000493213 ERVK-7P63135 1459 aa16.39■□□□□ 0.21
CDK16-207ENST00000493213 FGD6Q6ZV73 1430 aa16.38■□□□□ 0.21
CDK16-207ENST00000493213 PRDM15P57071 1507 aaPredicted RBP16.38■□□□□ 0.21
CDK16-207ENST00000493213 DAPK1P53355 1430 aa16.37■□□□□ 0.21
CDK16-207ENST00000493213 UBAP1LF5GYI3 381 aa16.37■□□□□ 0.21
CDK16-207ENST00000493213 CROCC2H7BZ55 1655 aa16.37■□□□□ 0.21
CDK16-207ENST00000493213 NPHP4O75161 1426 aaPredicted RBP16.36■□□□□ 0.21
CDK16-207ENST00000493213 ANKRD30AQ9BXX3 1397 aa16.36■□□□□ 0.21
CDK16-207ENST00000493213 KANK1Q14678 1352 aa16.35■□□□□ 0.21
CDK16-207ENST00000493213 TOM1O60784 492 aa16.33■□□□□ 0.2
CDK16-207ENST00000493213 RRP7BPQ9NSQ0 103 aa16.33■□□□□ 0.2
CDK16-207ENST00000493213 LMTK2Q8IWU2 1503 aa16.32■□□□□ 0.2
CDK16-207ENST00000493213 VWDEQ8N2E2 1590 aa16.32■□□□□ 0.2
CDK16-207ENST00000493213 SLIT1O75093 1534 aa16.3■□□□□ 0.2
CDK16-207ENST00000493213 ADGRL2O95490 1459 aa16.3■□□□□ 0.2
CDK16-207ENST00000493213 ARHGAP23Q9P227 1491 aa16.3■□□□□ 0.2
CDK16-207ENST00000493213 CEP152O94986 1710 aa16.3■□□□□ 0.2
CDK16-207ENST00000493213 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
CDK16-207ENST00000493213 UBR1Q8IWV7 1749 aa16.28■□□□□ 0.2
CDK16-207ENST00000493213 KDM5AP29375 1690 aaKnown RBP16.28■□□□□ 0.2
CDK16-207ENST00000493213 SCAF11Q99590 1463 aaKnown RBP16.28■□□□□ 0.2
CDK16-207ENST00000493213 ATXN8OSP0DMR3 200 aa16.26■□□□□ 0.19
CDK16-207ENST00000493213 EID1Q9Y6B2 187 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms