RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 SLC4A1APQ9BWU0 796 aaKnown RBP7.76□□□□□ -1.17
NEK4-205ENST00000493199 CROCC2H7BZ55 1655 aa7.76□□□□□ -1.17
NEK4-205ENST00000493199 WASHC2CQ9Y4E1 1318 aa7.76□□□□□ -1.17
NEK4-205ENST00000493199 KDM5CP41229 1560 aa7.76□□□□□ -1.17
NEK4-205ENST00000493199 BCORL1Q5H9F3 1711 aa7.75□□□□□ -1.17
NEK4-205ENST00000493199 NUP155O75694 1391 aa7.75□□□□□ -1.17
NEK4-205ENST00000493199 ZMYM4Q5VZL5 1548 aa7.75□□□□□ -1.17
NEK4-205ENST00000493199 ARHGEF12Q9NZN5 1544 aa7.75□□□□□ -1.17
NEK4-205ENST00000493199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.75□□□□□ -1.172e-6■■□□□ 11.6
NEK4-205ENST00000493199 NAIPQ13075 1403 aa7.75□□□□□ -1.17
NEK4-205ENST00000493199 RAB3GAP2Q9H2M9 1393 aa7.74□□□□□ -1.17
NEK4-205ENST00000493199 RICTORQ6R327 1708 aa7.73□□□□□ -1.17
NEK4-205ENST00000493199 FRMPD1Q5SYB0 1578 aa7.73□□□□□ -1.17
NEK4-205ENST00000493199 EIF2AK4Q9P2K8 1649 aaKnown RBP7.73□□□□□ -1.17
NEK4-205ENST00000493199 INO80Q9ULG1 1556 aaPredicted RBP7.72□□□□□ -1.17
NEK4-205ENST00000493199 LMTK3Q96Q04 1460 aa7.72□□□□□ -1.17
NEK4-205ENST00000493199 GCC2Q8IWJ2 1684 aa7.72□□□□□ -1.17
NEK4-205ENST00000493199 FAM135AQ9P2D6 1515 aa7.72□□□□□ -1.17
NEK4-205ENST00000493199 MADDQ8WXG6 1647 aa7.71□□□□□ -1.17
NEK4-205ENST00000493199 PTPRKQ15262 1439 aa7.71□□□□□ -1.17
NEK4-205ENST00000493199 ADRA2BP18089 450 aa7.71□□□□□ -1.18
NEK4-205ENST00000493199 MPHOSPH9Q99550 1183 aa7.71□□□□□ -1.18
NEK4-205ENST00000493199 TIMELESSQ9UNS1 1208 aa7.71□□□□□ -1.18
NEK4-205ENST00000493199 KIDINS220Q9ULH0 1771 aa7.71□□□□□ -1.18
NEK4-205ENST00000493199 REREQ9P2R6 1566 aa7.71□□□□□ -1.18
NEK4-205ENST00000493199 CNTLNQ9NXG0 1405 aa7.7□□□□□ -1.18
NEK4-205ENST00000493199 AGLP35573 1532 aa7.7□□□□□ -1.18
NEK4-205ENST00000493199 ARHGEF40Q8TER5 1519 aa7.7□□□□□ -1.18
NEK4-205ENST00000493199 HDGFP51858 240 aaKnown RBP7.7□□□□□ -1.18
NEK4-205ENST00000493199 MLECQ14165 292 aa7.69□□□□□ -1.18
NEK4-205ENST00000493199 STAC3Q96MF2 364 aa7.69□□□□□ -1.18
NEK4-205ENST00000493199 DIP2CQ9Y2E4 1556 aa7.68□□□□□ -1.18
NEK4-205ENST00000493199 RIMS1Q86UR5 1692 aaKnown RBP7.68□□□□□ -1.18
NEK4-205ENST00000493199 PKD2Q13563 968 aa7.68□□□□□ -1.18
NEK4-205ENST00000493199 STAG3Q9UJ98 1225 aa7.68□□□□□ -1.18
NEK4-205ENST00000493199 YEATS2Q9ULM3 1422 aa7.68□□□□□ -1.18
NEK4-205ENST00000493199 SLC52A1Q9NWF4 448 aa7.67□□□□□ -1.18
NEK4-205ENST00000493199 KDM5DQ9BY66 1539 aa7.67□□□□□ -1.18
NEK4-205ENST00000493199 RPRD2Q5VT52 1461 aaKnown RBP7.66□□□□□ -1.18
NEK4-205ENST00000493199 ABCA6Q8N139 1617 aa7.66□□□□□ -1.18
NEK4-205ENST00000493199 ZC3H13Q5T200 1668 aaKnown RBP7.65□□□□□ -1.18
NEK4-205ENST00000493199 SIGLEC1Q9BZZ2 1709 aa7.64□□□□□ -1.19
NEK4-205ENST00000493199 UNC13BO14795 1591 aa7.64□□□□□ -1.19
NEK4-205ENST00000493199 CCDC144AA2RUR9 1427 aa7.64□□□□□ -1.19
NEK4-205ENST00000493199 TONSLQ96HA7 1378 aa7.64□□□□□ -1.19
NEK4-205ENST00000493199 HSPA2P54652 639 aa7.64□□□□□ -1.19
NEK4-205ENST00000493199 CERKQ8TCT0 537 aa7.64□□□□□ -1.19
NEK4-205ENST00000493199 PRDM15P57071 1507 aaPredicted RBP7.63□□□□□ -1.19
NEK4-205ENST00000493199 ARHGAP31Q2M1Z3 1444 aa7.63□□□□□ -1.19
NEK4-205ENST00000493199 DHX57Q6P158 1386 aaKnown RBP7.63□□□□□ -1.19
NEK4-205ENST00000493199 SETD1BQ9UPS6 1966 aaKnown RBP7.63□□□□□ -1.19
NEK4-205ENST00000493199 FER1L4A9Z1Z3 1794 aa7.63□□□□□ -1.19
NEK4-205ENST00000493199 DEPDC5O75140 1603 aa7.63□□□□□ -1.19
NEK4-205ENST00000493199 IQGAP3Q86VI3 1631 aa7.63□□□□□ -1.19
NEK4-205ENST00000493199 RNF17Q9BXT8 1623 aaKnown RBP7.63□□□□□ -1.19
NEK4-205ENST00000493199 LMTK2Q8IWU2 1503 aa7.62□□□□□ -1.19
NEK4-205ENST00000493199 ZMYM3Q14202 1370 aa7.62□□□□□ -1.19
NEK4-205ENST00000493199 NEUROD1Q13562 356 aa7.62□□□□□ -1.19
NEK4-205ENST00000493199 TET3O43151 1660 aa7.61□□□□□ -1.19
NEK4-205ENST00000493199 CHGAP10645 457 aaKnown RBP7.61□□□□□ -1.19
NEK4-205ENST00000493199 PREX1Q8TCU6 1659 aa7.6□□□□□ -1.19
NEK4-205ENST00000493199 RPGRIP1LQ68CZ1 1315 aa7.6□□□□□ -1.19
NEK4-205ENST00000493199 ZNF326Q5BKZ1 582 aaKnown RBP7.6□□□□□ -1.19
NEK4-205ENST00000493199 THEMISQ8N1K5 641 aaPredicted RBP7.6□□□□□ -1.19
NEK4-205ENST00000493199 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.6□□□□□ -1.19
NEK4-205ENST00000493199 VGFO15240 615 aaPredicted RBP7.59□□□□□ -1.19
NEK4-205ENST00000493199 SLC24A1O60721 1099 aa7.59□□□□□ -1.19
NEK4-205ENST00000493199 DMRT2Q9Y5R5 561 aa7.59□□□□□ -1.19
NEK4-205ENST00000493199 EID1Q9Y6B2 187 aa7.59□□□□□ -1.19
NEK4-205ENST00000493199 ABCC3O15438 1527 aa7.58□□□□□ -1.2
NEK4-205ENST00000493199 MROH2AA6NES4 1674 aa7.58□□□□□ -1.2
NEK4-205ENST00000493199 PZPP20742 1482 aa7.58□□□□□ -1.2
NEK4-205ENST00000493199 NPATQ14207 1427 aa7.58□□□□□ -1.2
NEK4-205ENST00000493199 STRCQ7RTU9 1775 aa7.58□□□□□ -1.2
NEK4-205ENST00000493199 VWDEQ8N2E2 1590 aa7.58□□□□□ -1.2
NEK4-205ENST00000493199 ANKRD30BQ9BXX2 1392 aa7.58□□□□□ -1.2
NEK4-205ENST00000493199 EFCAB6Q5THR3 1501 aa7.57□□□□□ -1.2
NEK4-205ENST00000493199 CAMSAP1Q5T5Y3 1602 aa7.57□□□□□ -1.2
NEK4-205ENST00000493199 PPP1R15AO75807 674 aaPredicted RBP7.57□□□□□ -1.2
NEK4-205ENST00000493199 TNRQ92752 1358 aa7.57□□□□□ -1.2
NEK4-205ENST00000493199 PTPRTO14522 1441 aa7.56□□□□□ -1.2
NEK4-205ENST00000493199 UHRF1BP1Q6BDS2 1440 aa7.56□□□□□ -1.2
NEK4-205ENST00000493199 CEBPAP49715 358 aaPredicted RBP7.56□□□□□ -1.2
NEK4-205ENST00000493199 RGL3Q3MIN7 710 aa7.56□□□□□ -1.2
NEK4-205ENST00000493199 BCANQ96GW7 911 aa7.56□□□□□ -1.2
NEK4-205ENST00000493199 CLTCQ00610 1675 aaKnown RBP7.56□□□□□ -1.2
NEK4-205ENST00000493199 NLRP1Q9C000 1473 aa7.55□□□□□ -1.2
NEK4-205ENST00000493199 DCAF11Q8TEB1 546 aa7.55□□□□□ -1.2
NEK4-205ENST00000493199 TRPM2O94759 1503 aa7.55□□□□□ -1.2
NEK4-205ENST00000493199 CEP152O94986 1710 aa7.55□□□□□ -1.2
NEK4-205ENST00000493199 NOS1P29475 1434 aa7.54□□□□□ -1.2
NEK4-205ENST00000493199 IDI1Q13907 227 aa7.54□□□□□ -1.2
NEK4-205ENST00000493199 SIN3AQ96ST3 1273 aa7.54□□□□□ -1.2
NEK4-205ENST00000493199 SPHKAPQ2M3C7 1700 aa7.54□□□□□ -1.2
NEK4-205ENST00000493199 MROH1Q8NDA8 1641 aa7.53□□□□□ -1.2
NEK4-205ENST00000493199 KIF1BO60333 1816 aa7.53□□□□□ -1.2
NEK4-205ENST00000493199 SOCS7O14512 581 aa7.53□□□□□ -1.2
NEK4-205ENST00000493199 FBXO31Q5XUX0 539 aaPredicted RBP7.53□□□□□ -1.2
NEK4-205ENST00000493199 ANKLE2Q86XL3 938 aa7.53□□□□□ -1.2
NEK4-205ENST00000493199 KDM2AQ9Y2K7 1162 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms