RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 PTPN23Q9H3S7 1636 aa32.15■■■□□ 2.74
CLTA-208ENST00000493185 PTPRTO14522 1441 aa32.14■■■□□ 2.74
CLTA-208ENST00000493185 CAMSAP1Q5T5Y3 1602 aa32.14■■■□□ 2.74
CLTA-208ENST00000493185 WASHC2CQ9Y4E1 1318 aa32.13■■■□□ 2.73
CLTA-208ENST00000493185 CEP170BQ9Y4F5 1589 aaPredicted RBP32.12■■■□□ 2.73
CLTA-208ENST00000493185 CERKQ8TCT0 537 aa32.12■■■□□ 2.73
CLTA-208ENST00000493185 RNF17Q9BXT8 1623 aaKnown RBP32.09■■■□□ 2.73
CLTA-208ENST00000493185 EIF2AK4Q9P2K8 1649 aaKnown RBP32.09■■■□□ 2.73
CLTA-208ENST00000493185 PZPP20742 1482 aa32.08■■■□□ 2.73
CLTA-208ENST00000493185 CROCC2H7BZ55 1655 aa32.08■■■□□ 2.73
CLTA-208ENST00000493185 FGD6Q6ZV73 1430 aa32.08■■■□□ 2.73
CLTA-208ENST00000493185 SHANK2Q9UPX8 1470 aa32.06■■■□□ 2.72
CLTA-208ENST00000493185 DUOX2Q9NRD8 1548 aa32.05■■■□□ 2.72
CLTA-208ENST00000493185 ABCC5O15440 1437 aa32.04■■■□□ 2.72
CLTA-208ENST00000493185 TNRQ92752 1358 aa32.03■■■□□ 2.72
CLTA-208ENST00000493185 A2ML1A8K2U0 1454 aa32.03■■■□□ 2.72
CLTA-208ENST00000493185 PLA2R1Q13018 1463 aa32.03■■■□□ 2.72
CLTA-208ENST00000493185 TCOF1Q13428 1488 aaKnown RBP32.03■■■□□ 2.72
CLTA-208ENST00000493185 ZC3H13Q5T200 1668 aaKnown RBP32.02■■■□□ 2.72
CLTA-208ENST00000493185 DNMT1P26358 1616 aaKnown RBP32.01■■■□□ 2.72
CLTA-208ENST00000493185 FBXO31Q5XUX0 539 aaPredicted RBP32.01■■■□□ 2.71
CLTA-208ENST00000493185 DAPK1P53355 1430 aa32■■■□□ 2.71
CLTA-208ENST00000493185 KIF15Q9NS87 1388 aa32■■■□□ 2.71
CLTA-208ENST00000493185 NCKAP5LQ9HCH0 1330 aa31.99■■■□□ 2.71
CLTA-208ENST00000493185 PKD2Q13563 968 aa31.98■■■□□ 2.71
CLTA-208ENST00000493185 ABCC3O15438 1527 aa31.98■■■□□ 2.71
CLTA-208ENST00000493185 RRP7BPQ9NSQ0 103 aa31.95■■■□□ 2.71
CLTA-208ENST00000493185 MROH1Q8NDA8 1641 aa31.95■■■□□ 2.71
CLTA-208ENST00000493185 ERBINQ96RT1 1412 aa31.93■■■□□ 2.7
CLTA-208ENST00000493185 CEP152O94986 1710 aa31.91■■■□□ 2.7
CLTA-208ENST00000493185 NLRP1Q9C000 1473 aa31.91■■■□□ 2.7
CLTA-208ENST00000493185 ANKRD30AQ9BXX3 1397 aa31.89■■■□□ 2.7
CLTA-208ENST00000493185 LTBP4Q8N2S1 1624 aa31.88■■■□□ 2.69
CLTA-208ENST00000493185 PRDM15P57071 1507 aaPredicted RBP31.86■■■□□ 2.69
CLTA-208ENST00000493185 CHIC2Q9UKJ5 165 aa31.86■■■□□ 2.69
CLTA-208ENST00000493185 SPATA31D1Q6ZQQ2 1576 aa31.85■■■□□ 2.69
CLTA-208ENST00000493185 FAM50AQ14320 339 aaKnown RBP31.85■■■□□ 2.69
CLTA-208ENST00000493185 POLR1AO95602 1720 aaPredicted RBP31.84■■■□□ 2.69
CLTA-208ENST00000493185 THEMISQ8N1K5 641 aaPredicted RBP31.83■■■□□ 2.69
CLTA-208ENST00000493185 ERVK-7P63135 1459 aa31.83■■■□□ 2.69
CLTA-208ENST00000493185 UGGT1Q9NYU2 1555 aa31.82■■■□□ 2.68
CLTA-208ENST00000493185 CFAP65Q6ZU64 1925 aaKnown RBP31.82■■■□□ 2.68
CLTA-208ENST00000493185 DEPDC5O75140 1603 aa31.81■■■□□ 2.68
CLTA-208ENST00000493185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.79■■■□□ 2.681e-8■■■□□ 16.6
CLTA-208ENST00000493185 KANK1Q14678 1352 aa31.79■■■□□ 2.68
CLTA-208ENST00000493185 ADGRL2O95490 1459 aa31.78■■■□□ 2.68
CLTA-208ENST00000493185 IQSEC2Q5JU85 1478 aa31.78■■■□□ 2.68
CLTA-208ENST00000493185 ZNF335Q9H4Z2 1342 aaPredicted RBP31.77■■■□□ 2.68
CLTA-208ENST00000493185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.77■■■□□ 2.68
CLTA-208ENST00000493185 ANKLE2Q86XL3 938 aa31.76■■■□□ 2.67
CLTA-208ENST00000493185 ARHGAP31Q2M1Z3 1444 aa31.75■■■□□ 2.67
CLTA-208ENST00000493185 NEURL4Q96JN8 1562 aa31.75■■■□□ 2.67
CLTA-208ENST00000493185 LMTK2Q8IWU2 1503 aa31.66■■■□□ 2.66
CLTA-208ENST00000493185 VWDEQ8N2E2 1590 aa31.66■■■□□ 2.66
CLTA-208ENST00000493185 UBR1Q8IWV7 1749 aa31.65■■■□□ 2.66
CLTA-208ENST00000493185 MED14O60244 1454 aa31.65■■■□□ 2.66
CLTA-208ENST00000493185 NPHP4O75161 1426 aaPredicted RBP31.64■■■□□ 2.66
CLTA-208ENST00000493185 ANKRD50Q9ULJ7 1429 aa31.64■■■□□ 2.66
CLTA-208ENST00000493185 IQGAP1P46940 1657 aa31.6■■■□□ 2.65
CLTA-208ENST00000493185 EFCAB6Q5THR3 1501 aa31.58■■■□□ 2.65
CLTA-208ENST00000493185 CPS1P31327 1500 aa31.57■■■□□ 2.64
CLTA-208ENST00000493185 PPARGC1BQ86YN6 1023 aaKnown RBP31.56■■■□□ 2.64
CLTA-208ENST00000493185 PIK3C2BO00750 1634 aa31.55■■■□□ 2.64
CLTA-208ENST00000493185 ROCK1Q13464 1354 aa31.54■■■□□ 2.64
CLTA-208ENST00000493185 SCAF11Q99590 1463 aaKnown RBP31.53■■■□□ 2.64
CLTA-208ENST00000493185 UBAP1LF5GYI3 381 aa31.53■■■□□ 2.64
CLTA-208ENST00000493185 STAG3Q9UJ98 1225 aa31.52■■■□□ 2.64
CLTA-208ENST00000493185 SLIT1O75093 1534 aa31.52■■■□□ 2.64
CLTA-208ENST00000493185 ARHGAP23Q9P227 1491 aa31.51■■■□□ 2.63
CLTA-208ENST00000493185 KDM5AP29375 1690 aaKnown RBP31.5■■■□□ 2.63
CLTA-208ENST00000493185 SYNMO15061 1565 aa31.49■■■□□ 2.63
CLTA-208ENST00000493185 NOS1P29475 1434 aa31.49■■■□□ 2.63
CLTA-208ENST00000493185 RPRD2Q5VT52 1461 aaKnown RBP31.48■■■□□ 2.63
CLTA-208ENST00000493185 TXNDC2Q86VQ3 553 aa31.48■■■□□ 2.63
CLTA-208ENST00000493185 EID1Q9Y6B2 187 aa31.48■■■□□ 2.63
CLTA-208ENST00000493185 TET3O43151 1660 aa31.48■■■□□ 2.63
CLTA-208ENST00000493185 UNC13BO14795 1591 aa31.47■■■□□ 2.63
CLTA-208ENST00000493185 IDI1Q13907 227 aa31.47■■■□□ 2.63
CLTA-208ENST00000493185 ITGAEP38570 1179 aa31.46■■■□□ 2.63
CLTA-208ENST00000493185 LTKP29376 864 aa31.45■■■□□ 2.63
CLTA-208ENST00000493185 TMEM2Q9UHN6 1383 aa31.44■■■□□ 2.62
CLTA-208ENST00000493185 GCC2Q8IWJ2 1684 aa31.43■■■□□ 2.62
CLTA-208ENST00000493185 SLC52A1Q9NWF4 448 aa31.42■■■□□ 2.62
CLTA-208ENST00000493185 ADGRB3O60242 1522 aa31.39■■■□□ 2.62
CLTA-208ENST00000493185 STRCP1A6NGW2 1772 aa31.38■■■□□ 2.61
CLTA-208ENST00000493185 TOM1O60784 492 aa31.36■■■□□ 2.61
CLTA-208ENST00000493185 IQGAP3Q86VI3 1631 aa31.35■■■□□ 2.61
CLTA-208ENST00000493185 RRBP1Q9P2E9 1410 aaKnown RBP31.32■■■□□ 2.6
CLTA-208ENST00000493185 E9PCH4 1651 aa31.32■■■□□ 2.6
CLTA-208ENST00000493185 SCAF1Q9H7N4 1312 aaKnown RBP31.31■■■□□ 2.6
CLTA-208ENST00000493185 NUP155O75694 1391 aa31.3■■■□□ 2.6
CLTA-208ENST00000493185 LRRC7Q96NW7 1537 aa31.3■■■□□ 2.6
CLTA-208ENST00000493185 PIP4K2BP78356 416 aa31.28■■■□□ 2.6
CLTA-208ENST00000493185 MYO5BQ9ULV0 1848 aa31.26■■■□□ 2.6
CLTA-208ENST00000493185 DISP3Q9P2K9 1392 aa31.24■■■□□ 2.59
CLTA-208ENST00000493185 TMEM131LA2VDJ0 1609 aa31.24■■■□□ 2.59
CLTA-208ENST00000493185 HDGFP51858 240 aaKnown RBP31.21■■■□□ 2.59
CLTA-208ENST00000493185 BCANQ96GW7 911 aa31.2■■■□□ 2.59
CLTA-208ENST00000493185 ZFYVE9O95405 1425 aa31.19■■■□□ 2.58
CLTA-208ENST00000493185 CHGAP10645 457 aaKnown RBP31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 618.2 ms