RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 REREQ9P2R6 1566 aa13.98□□□□□ -0.17
CSTF1-206ENST00000493039 AGLP35573 1532 aa13.96□□□□□ -0.18
CSTF1-206ENST00000493039 GGT6Q6P531 493 aa13.94□□□□□ -0.18
CSTF1-206ENST00000493039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.93□□□□□ -0.184e-7■■■■□ 22.7
CSTF1-206ENST00000493039 MROH1Q8NDA8 1641 aa13.93□□□□□ -0.18
CSTF1-206ENST00000493039 EIF2AK4Q9P2K8 1649 aaKnown RBP13.92□□□□□ -0.18
CSTF1-206ENST00000493039 BCORL1Q5H9F3 1711 aa13.92□□□□□ -0.18
CSTF1-206ENST00000493039 NUP155O75694 1391 aa13.92□□□□□ -0.18
CSTF1-206ENST00000493039 TRIM52Q96A61 297 aa13.92□□□□□ -0.18
CSTF1-206ENST00000493039 MLECQ14165 292 aa13.91□□□□□ -0.18
CSTF1-206ENST00000493039 ARID4BQ4LE39 1312 aaPredicted RBP13.91□□□□□ -0.18
CSTF1-206ENST00000493039 DEPDC5O75140 1603 aa13.91□□□□□ -0.18
CSTF1-206ENST00000493039 PZPP20742 1482 aa13.9□□□□□ -0.18
CSTF1-206ENST00000493039 UNC13BO14795 1591 aa13.9□□□□□ -0.18
CSTF1-206ENST00000493039 RNF17Q9BXT8 1623 aaKnown RBP13.9□□□□□ -0.18
CSTF1-206ENST00000493039 VWDEQ8N2E2 1590 aa13.89□□□□□ -0.19
CSTF1-206ENST00000493039 MPHOSPH9Q99550 1183 aa13.88□□□□□ -0.19
CSTF1-206ENST00000493039 PRDM15P57071 1507 aaPredicted RBP13.88□□□□□ -0.19
CSTF1-206ENST00000493039 KDM5DQ9BY66 1539 aa13.87□□□□□ -0.19
CSTF1-206ENST00000493039 DHX57Q6P158 1386 aaKnown RBP13.87□□□□□ -0.19
CSTF1-206ENST00000493039 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
CSTF1-206ENST00000493039 FAM135AQ9P2D6 1515 aa13.86□□□□□ -0.19
CSTF1-206ENST00000493039 WASHC2CQ9Y4E1 1318 aa13.86□□□□□ -0.19
CSTF1-206ENST00000493039 PPP6R1Q9UPN7 881 aa13.86□□□□□ -0.19
CSTF1-206ENST00000493039 ACIN1Q9UKV3 1341 aaKnown RBP13.85□□□□□ -0.19
CSTF1-206ENST00000493039 FOXD1Q16676 465 aa13.85□□□□□ -0.19
CSTF1-206ENST00000493039 ABCC3O15438 1527 aa13.84□□□□□ -0.19
CSTF1-206ENST00000493039 IQGAP3Q86VI3 1631 aa13.84□□□□□ -0.19
CSTF1-206ENST00000493039 PKD2Q13563 968 aa13.84□□□□□ -0.19
CSTF1-206ENST00000493039 KANK1Q14678 1352 aa13.84□□□□□ -0.19
CSTF1-206ENST00000493039 LMTK2Q8IWU2 1503 aa13.83□□□□□ -0.2
CSTF1-206ENST00000493039 NPATQ14207 1427 aa13.8□□□□□ -0.2
CSTF1-206ENST00000493039 ZMYM3Q14202 1370 aa13.79□□□□□ -0.2
CSTF1-206ENST00000493039 CEP152O94986 1710 aa13.79□□□□□ -0.2
CSTF1-206ENST00000493039 PLA2R1Q13018 1463 aa13.79□□□□□ -0.2
CSTF1-206ENST00000493039 ADAMTSL3P82987 1691 aa13.78□□□□□ -0.2
CSTF1-206ENST00000493039 FBXO31Q5XUX0 539 aaPredicted RBP13.78□□□□□ -0.2
CSTF1-206ENST00000493039 EFCAB6Q5THR3 1501 aa13.78□□□□□ -0.2
CSTF1-206ENST00000493039 ARHGAP31Q2M1Z3 1444 aa13.78□□□□□ -0.2
CSTF1-206ENST00000493039 KDM4FA0A1W2PPD8 638 aa13.78□□□□□ -0.2
CSTF1-206ENST00000493039 CEBPAP49715 358 aaPredicted RBP13.78□□□□□ -0.2
CSTF1-206ENST00000493039 TET3O43151 1660 aa13.77□□□□□ -0.2
CSTF1-206ENST00000493039 ANKRD30BQ9BXX2 1392 aa13.77□□□□□ -0.2
CSTF1-206ENST00000493039 CLTCQ00610 1675 aaKnown RBP13.77□□□□□ -0.21
CSTF1-206ENST00000493039 E9PCH4 1651 aa13.76□□□□□ -0.21
CSTF1-206ENST00000493039 ESF1Q9H501 851 aaKnown RBP13.76□□□□□ -0.21
CSTF1-206ENST00000493039 MADDQ8WXG6 1647 aa13.76□□□□□ -0.21
CSTF1-206ENST00000493039 CNTLNQ9NXG0 1405 aa13.76□□□□□ -0.21
CSTF1-206ENST00000493039 CAMSAP1Q5T5Y3 1602 aa13.75□□□□□ -0.21
CSTF1-206ENST00000493039 ZC3H13Q5T200 1668 aaKnown RBP13.75□□□□□ -0.21
CSTF1-206ENST00000493039 CCER1Q8TC90 406 aaPredicted RBP13.75□□□□□ -0.21
CSTF1-206ENST00000493039 PTPRTO14522 1441 aa13.75□□□□□ -0.21
CSTF1-206ENST00000493039 RPRD2Q5VT52 1461 aaKnown RBP13.74□□□□□ -0.21
CSTF1-206ENST00000493039 SIN3AQ96ST3 1273 aa13.74□□□□□ -0.21
CSTF1-206ENST00000493039 NOS1P29475 1434 aa13.73□□□□□ -0.21
CSTF1-206ENST00000493039 FER1L4A9Z1Z3 1794 aa13.72□□□□□ -0.21
CSTF1-206ENST00000493039 ERVK-7P63135 1459 aa13.7□□□□□ -0.22
CSTF1-206ENST00000493039 MROH2AA6NES4 1674 aa13.7□□□□□ -0.22
CSTF1-206ENST00000493039 RIMS1Q86UR5 1692 aaKnown RBP13.7□□□□□ -0.22
CSTF1-206ENST00000493039 PTPRMP28827 1452 aa13.7□□□□□ -0.22
CSTF1-206ENST00000493039 PLPPR3Q6T4P5 718 aa13.7□□□□□ -0.22
CSTF1-206ENST00000493039 CLSPNQ9HAW4 1339 aa13.69□□□□□ -0.22
CSTF1-206ENST00000493039 CFAP65Q6ZU64 1925 aaKnown RBP13.69□□□□□ -0.22
CSTF1-206ENST00000493039 UGGT1Q9NYU2 1555 aa13.68□□□□□ -0.22
CSTF1-206ENST00000493039 C3P01024 1663 aa13.68□□□□□ -0.22
CSTF1-206ENST00000493039 SYNMO15061 1565 aa13.68□□□□□ -0.22
CSTF1-206ENST00000493039 SPATA31D1Q6ZQQ2 1576 aa13.68□□□□□ -0.22
CSTF1-206ENST00000493039 IDI1Q13907 227 aa13.68□□□□□ -0.22
CSTF1-206ENST00000493039 TRPM2O94759 1503 aa13.67□□□□□ -0.22
CSTF1-206ENST00000493039 PREX1Q8TCU6 1659 aa13.67□□□□□ -0.22
CSTF1-206ENST00000493039 NEUROD1Q13562 356 aa13.66□□□□□ -0.22
CSTF1-206ENST00000493039 SPHKAPQ2M3C7 1700 aa13.65□□□□□ -0.22
CSTF1-206ENST00000493039 TNRQ92752 1358 aa13.65□□□□□ -0.22
CSTF1-206ENST00000493039 SLC52A1Q9NWF4 448 aa13.65□□□□□ -0.22
CSTF1-206ENST00000493039 CCDC144AA2RUR9 1427 aa13.65□□□□□ -0.22
CSTF1-206ENST00000493039 CLTCL1P53675 1640 aa13.64□□□□□ -0.23
CSTF1-206ENST00000493039 NCBP3Q53F19 620 aaKnown RBP13.63□□□□□ -0.23
CSTF1-206ENST00000493039 PIK3C2BO00750 1634 aa13.63□□□□□ -0.23
CSTF1-206ENST00000493039 SPATA31E1Q6ZUB1 1445 aa13.62□□□□□ -0.23
CSTF1-206ENST00000493039 RGL3Q3MIN7 710 aa13.59□□□□□ -0.23
CSTF1-206ENST00000493039 L3MBTL2Q969R5 705 aa13.59□□□□□ -0.23
CSTF1-206ENST00000493039 NLRP1Q9C000 1473 aa13.58□□□□□ -0.24
CSTF1-206ENST00000493039 CHGAP10645 457 aaKnown RBP13.57□□□□□ -0.24
CSTF1-206ENST00000493039 A2ML1A8K2U0 1454 aa13.57□□□□□ -0.24
CSTF1-206ENST00000493039 TMEM131LA2VDJ0 1609 aa13.56□□□□□ -0.24
CSTF1-206ENST00000493039 ADGRB3O60242 1522 aa13.56□□□□□ -0.24
CSTF1-206ENST00000493039 SETD1BQ9UPS6 1966 aaKnown RBP13.56□□□□□ -0.24
CSTF1-206ENST00000493039 MYO3AQ8NEV4 1616 aa13.54□□□□□ -0.24
CSTF1-206ENST00000493039 NEURL4Q96JN8 1562 aa13.54□□□□□ -0.24
CSTF1-206ENST00000493039 TIMELESSQ9UNS1 1208 aa13.54□□□□□ -0.24
CSTF1-206ENST00000493039 DCAF11Q8TEB1 546 aa13.53□□□□□ -0.24
CSTF1-206ENST00000493039 TONSLQ96HA7 1378 aa13.53□□□□□ -0.24
CSTF1-206ENST00000493039 ZNF326Q5BKZ1 582 aaKnown RBP13.52□□□□□ -0.24
CSTF1-206ENST00000493039 STAG3Q9UJ98 1225 aa13.52□□□□□ -0.24
CSTF1-206ENST00000493039 PPP1R15AO75807 674 aaPredicted RBP13.52□□□□□ -0.25
CSTF1-206ENST00000493039 CEP170BQ9Y4F5 1589 aaPredicted RBP13.52□□□□□ -0.25
CSTF1-206ENST00000493039 UBR1Q8IWV7 1749 aa13.52□□□□□ -0.25
CSTF1-206ENST00000493039 UHRF1BP1Q6BDS2 1440 aa13.52□□□□□ -0.25
CSTF1-206ENST00000493039 NUTM2DQ5VT03 806 aaPredicted RBP13.51□□□□□ -0.25
CSTF1-206ENST00000493039 KDM2AQ9Y2K7 1162 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms