RNA–Protein interactions for RNA: ENST00000492709.5

HM13-220, Transcript of histocompatibility minor 13, humanhuman

TSL 5

Gene HM13, Length 1,248 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-220ENST00000492709 RTEL1-TNFRSF6BF6WH68 1400 aa23.93■■□□□ 1.42
HM13-220ENST00000492709 TNRQ92752 1358 aa23.92■■□□□ 1.42
HM13-220ENST00000492709 A2ML1A8K2U0 1454 aa23.92■■□□□ 1.42
HM13-220ENST00000492709 TCOF1Q13428 1488 aaKnown RBP23.92■■□□□ 1.42
HM13-220ENST00000492709 TSPY4P0CV99 314 aa23.91■■□□□ 1.42
HM13-220ENST00000492709 TSPY10P0CW01 314 aa23.91■■□□□ 1.42
HM13-220ENST00000492709 NCOA2Q15596 1464 aa23.9■■□□□ 1.42
HM13-220ENST00000492709 CAMSAP2Q08AD1 1489 aa23.89■■□□□ 1.42
HM13-220ENST00000492709 CCDC141Q6ZP82 1450 aa23.89■■□□□ 1.42
HM13-220ENST00000492709 DNMT1P26358 1616 aaKnown RBP23.88■■□□□ 1.41
HM13-220ENST00000492709 RSPH4AQ5TD94 716 aa23.88■■□□□ 1.41
HM13-220ENST00000492709 ANKLE2Q86XL3 938 aa23.87■■□□□ 1.41
HM13-220ENST00000492709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.86■■□□□ 1.41
HM13-220ENST00000492709 THEMISQ8N1K5 641 aaPredicted RBP23.85■■□□□ 1.41
HM13-220ENST00000492709 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
HM13-220ENST00000492709 LOC105371045A0A1W2PR82 267 aa23.83■■□□□ 1.41
HM13-220ENST00000492709 TOM1O60784 492 aa23.82■■□□□ 1.4
HM13-220ENST00000492709 HSPA1LP34931 641 aa23.82■■□□□ 1.4
HM13-220ENST00000492709 KDM5DQ9BY66 1539 aa23.82■■□□□ 1.4
HM13-220ENST00000492709 PZPP20742 1482 aa23.81■■□□□ 1.4
HM13-220ENST00000492709 MIA2Q96PC5 1412 aa23.8■■□□□ 1.4
HM13-220ENST00000492709 SHANK2Q9UPX8 1470 aa23.77■■□□□ 1.4
HM13-220ENST00000492709 POLR1AO95602 1720 aaPredicted RBP23.76■■□□□ 1.39
HM13-220ENST00000492709 KANK4Q5T7N3 995 aaPredicted RBP23.75■■□□□ 1.39
HM13-220ENST00000492709 NEURL4Q96JN8 1562 aa23.74■■□□□ 1.39
HM13-220ENST00000492709 UGGT1Q9NYU2 1555 aa23.74■■□□□ 1.39
HM13-220ENST00000492709 FAM135AQ9P2D6 1515 aa23.74■■□□□ 1.39
HM13-220ENST00000492709 NPHP4O75161 1426 aaPredicted RBP23.73■■□□□ 1.39
HM13-220ENST00000492709 ARHGEF5Q12774 1597 aa23.71■■□□□ 1.39
HM13-220ENST00000492709 CPS1P31327 1500 aa23.71■■□□□ 1.39
HM13-220ENST00000492709 NLRP1Q9C000 1473 aa23.71■■□□□ 1.39
HM13-220ENST00000492709 LRRC9Q6ZRR7 1453 aa23.7■■□□□ 1.38
HM13-220ENST00000492709 CFAP65Q6ZU64 1925 aaKnown RBP23.68■■□□□ 1.38
HM13-220ENST00000492709 VPS8Q8N3P4 1428 aa23.67■■□□□ 1.38
HM13-220ENST00000492709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.67■■□□□ 1.389e-9■□□□□ 10
HM13-220ENST00000492709 VWDEQ8N2E2 1590 aa23.65■■□□□ 1.38
HM13-220ENST00000492709 ABCC3O15438 1527 aa23.64■■□□□ 1.38
HM13-220ENST00000492709 PHF23Q9BUL5 403 aaPredicted RBP23.64■■□□□ 1.37
HM13-220ENST00000492709 RRP7BPQ9NSQ0 103 aa23.64■■□□□ 1.37
HM13-220ENST00000492709 MED14O60244 1454 aa23.61■■□□□ 1.37
HM13-220ENST00000492709 APLP2Q06481 763 aa23.6■■□□□ 1.37
HM13-220ENST00000492709 TXNDC2Q86VQ3 553 aa23.6■■□□□ 1.37
HM13-220ENST00000492709 ERVK-7P63135 1459 aa23.6■■□□□ 1.37
HM13-220ENST00000492709 IQGAP1P46940 1657 aa23.6■■□□□ 1.37
HM13-220ENST00000492709 MYOM3Q5VTT5 1437 aa23.59■■□□□ 1.37
HM13-220ENST00000492709 RNF17Q9BXT8 1623 aaKnown RBP23.59■■□□□ 1.37
HM13-220ENST00000492709 MED1Q15648 1581 aaPredicted RBP23.59■■□□□ 1.37
HM13-220ENST00000492709 DEPDC5O75140 1603 aa23.59■■□□□ 1.37
HM13-220ENST00000492709 MAST1Q9Y2H9 1570 aa23.58■■□□□ 1.37
HM13-220ENST00000492709 STAG3Q9UJ98 1225 aa23.58■■□□□ 1.37
HM13-220ENST00000492709 CEP152O94986 1710 aa23.58■■□□□ 1.37
HM13-220ENST00000492709 LTKP29376 864 aa23.57■■□□□ 1.36
HM13-220ENST00000492709 CHIC2Q9UKJ5 165 aa23.56■■□□□ 1.36
HM13-220ENST00000492709 ZC3H13Q5T200 1668 aaKnown RBP23.55■■□□□ 1.36
HM13-220ENST00000492709 LRRC7Q96NW7 1537 aa23.54■■□□□ 1.36
HM13-220ENST00000492709 KIF15Q9NS87 1388 aa23.54■■□□□ 1.36
HM13-220ENST00000492709 EID1Q9Y6B2 187 aa23.54■■□□□ 1.36
HM13-220ENST00000492709 DUOX2Q9NRD8 1548 aa23.54■■□□□ 1.36
HM13-220ENST00000492709 STRCP1A6NGW2 1772 aa23.53■■□□□ 1.36
HM13-220ENST00000492709 EIF2AK4Q9P2K8 1649 aaKnown RBP23.53■■□□□ 1.36
HM13-220ENST00000492709 MROH1Q8NDA8 1641 aa23.52■■□□□ 1.36
HM13-220ENST00000492709 ALKQ9UM73 1620 aa23.5■■□□□ 1.35
HM13-220ENST00000492709 SCAF11Q99590 1463 aaKnown RBP23.49■■□□□ 1.35
HM13-220ENST00000492709 UBR1Q8IWV7 1749 aa23.49■■□□□ 1.35
HM13-220ENST00000492709 ABCC5O15440 1437 aa23.49■■□□□ 1.35
HM13-220ENST00000492709 KANK1Q14678 1352 aa23.48■■□□□ 1.35
HM13-220ENST00000492709 BCANQ96GW7 911 aa23.47■■□□□ 1.35
HM13-220ENST00000492709 MAP3K1Q13233 1512 aa23.47■■□□□ 1.35
HM13-220ENST00000492709 RBM33Q96EV2 1170 aaKnown RBP23.45■■□□□ 1.34
HM13-220ENST00000492709 PTPN23Q9H3S7 1636 aa23.44■■□□□ 1.34
HM13-220ENST00000492709 IDI1Q13907 227 aa23.43■■□□□ 1.34
HM13-220ENST00000492709 SLC26A8Q96RN1 970 aa23.43■■□□□ 1.34
HM13-220ENST00000492709 ERBINQ96RT1 1412 aa23.42■■□□□ 1.34
HM13-220ENST00000492709 DAPK1P53355 1430 aa23.42■■□□□ 1.34
HM13-220ENST00000492709 ARHGAP31Q2M1Z3 1444 aa23.41■■□□□ 1.34
HM13-220ENST00000492709 SYNMO15061 1565 aa23.4■■□□□ 1.34
HM13-220ENST00000492709 ARHGAP23Q9P227 1491 aa23.4■■□□□ 1.34
HM13-220ENST00000492709 PIK3C2BO00750 1634 aa23.4■■□□□ 1.34
HM13-220ENST00000492709 TMEM2Q9UHN6 1383 aa23.4■■□□□ 1.34
HM13-220ENST00000492709 PROSER2Q86WR7 435 aaPredicted RBP23.39■■□□□ 1.33
HM13-220ENST00000492709 ANKRD30AQ9BXX3 1397 aa23.39■■□□□ 1.33
HM13-220ENST00000492709 SLIT1O75093 1534 aa23.38■■□□□ 1.33
HM13-220ENST00000492709 PRDM15P57071 1507 aaPredicted RBP23.38■■□□□ 1.33
HM13-220ENST00000492709 FAM50AQ14320 339 aaKnown RBP23.38■■□□□ 1.33
HM13-220ENST00000492709 CROCC2H7BZ55 1655 aa23.37■■□□□ 1.33
HM13-220ENST00000492709 FGD6Q6ZV73 1430 aa23.35■■□□□ 1.33
HM13-220ENST00000492709 TMEM94Q12767 1356 aa23.34■■□□□ 1.33
HM13-220ENST00000492709 KCNA6P17658 529 aa23.33■■□□□ 1.33
HM13-220ENST00000492709 EFCAB6Q5THR3 1501 aa23.32■■□□□ 1.32
HM13-220ENST00000492709 RGS17Q9UGC6 210 aaPredicted RBP23.31■■□□□ 1.32
HM13-220ENST00000492709 XIRP1Q702N8 1843 aaKnown RBP23.31■■□□□ 1.32
HM13-220ENST00000492709 CHGAP10645 457 aaKnown RBP23.29■■□□□ 1.32
HM13-220ENST00000492709 PPP1R15AO75807 674 aaPredicted RBP23.28■■□□□ 1.32
HM13-220ENST00000492709 SLC52A1Q9NWF4 448 aa23.26■■□□□ 1.31
HM13-220ENST00000492709 FAM135BQ49AJ0 1406 aa23.25■■□□□ 1.31
HM13-220ENST00000492709 LMTK2Q8IWU2 1503 aa23.24■■□□□ 1.31
HM13-220ENST00000492709 NUTM2DQ5VT03 806 aaPredicted RBP23.24■■□□□ 1.31
HM13-220ENST00000492709 NOS1P29475 1434 aa23.22■■□□□ 1.31
HM13-220ENST00000492709 POTEAQ6S8J7 498 aa23.21■■□□□ 1.31
HM13-220ENST00000492709 C14orf37Q86TY3 774 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms