RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 GGT6Q6P531 493 aa15.82■□□□□ 0.12
TNFRSF9-203ENST00000492571 CASKIN1Q8WXD9 1431 aa15.82■□□□□ 0.12
TNFRSF9-203ENST00000492571 ABCA6Q8N139 1617 aa15.82■□□□□ 0.12
TNFRSF9-203ENST00000492571 C3P01024 1663 aa15.81■□□□□ 0.12
TNFRSF9-203ENST00000492571 ABCC1P33527 1531 aa15.81■□□□□ 0.12
TNFRSF9-203ENST00000492571 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF9-203ENST00000492571 SPATA31D1Q6ZQQ2 1576 aa15.8■□□□□ 0.12
TNFRSF9-203ENST00000492571 LTBP4Q8N2S1 1624 aa15.79■□□□□ 0.12
TNFRSF9-203ENST00000492571 ZNF335Q9H4Z2 1342 aaPredicted RBP15.78■□□□□ 0.12
TNFRSF9-203ENST00000492571 CDC42BPBQ9Y5S2 1711 aa15.78■□□□□ 0.12
TNFRSF9-203ENST00000492571 CAMSAP1Q5T5Y3 1602 aa15.78■□□□□ 0.12
TNFRSF9-203ENST00000492571 PREX2Q70Z35 1606 aa15.78■□□□□ 0.12
TNFRSF9-203ENST00000492571 PIP4P2Q8N4L2 257 aa15.77■□□□□ 0.12
TNFRSF9-203ENST00000492571 PLEKHH2Q8IVE3 1493 aa15.75■□□□□ 0.11
TNFRSF9-203ENST00000492571 CCNB3Q8WWL7 1395 aa15.75■□□□□ 0.11
TNFRSF9-203ENST00000492571 KIAA1107Q9UPP5 1409 aa15.74■□□□□ 0.11
TNFRSF9-203ENST00000492571 KIDINS220Q9ULH0 1771 aa15.74■□□□□ 0.11
TNFRSF9-203ENST00000492571 SAMD9LQ8IVG5 1584 aa15.74■□□□□ 0.11
TNFRSF9-203ENST00000492571 ITSN2Q9NZM3 1697 aa15.73■□□□□ 0.11
TNFRSF9-203ENST00000492571 A2MP01023 1474 aa15.73■□□□□ 0.11
TNFRSF9-203ENST00000492571 TOM1O60784 492 aa15.73■□□□□ 0.11
TNFRSF9-203ENST00000492571 GPATCH8Q9UKJ3 1502 aaKnown RBP15.73■□□□□ 0.11
TNFRSF9-203ENST00000492571 PLA2R1Q13018 1463 aa15.72■□□□□ 0.11
TNFRSF9-203ENST00000492571 FYCO1Q9BQS8 1478 aa15.72■□□□□ 0.11
TNFRSF9-203ENST00000492571 ZNF692Q9BU19 519 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF9-203ENST00000492571 SSUH2Q9Y2M2 353 aa15.72■□□□□ 0.11
TNFRSF9-203ENST00000492571 SYCP2Q9BX26 1530 aa15.71■□□□□ 0.11
TNFRSF9-203ENST00000492571 MTUS2Q5JR59 1369 aa15.71■□□□□ 0.11
TNFRSF9-203ENST00000492571 MROH2AA6NES4 1674 aa15.7■□□□□ 0.1
TNFRSF9-203ENST00000492571 PTPRKQ15262 1439 aa15.69■□□□□ 0.1
TNFRSF9-203ENST00000492571 FXR2P51116 673 aaKnown RBP eCLIP15.69■□□□□ 0.1
TNFRSF9-203ENST00000492571 PIP4K2BP78356 416 aa15.69■□□□□ 0.1
TNFRSF9-203ENST00000492571 ATP7AQ04656 1500 aa15.68■□□□□ 0.1
TNFRSF9-203ENST00000492571 ANKLE2Q86XL3 938 aa15.67■□□□□ 0.1
TNFRSF9-203ENST00000492571 LRRIQ1Q96JM4 1722 aa15.67■□□□□ 0.1
TNFRSF9-203ENST00000492571 TCOF1Q13428 1488 aaKnown RBP15.66■□□□□ 0.1
TNFRSF9-203ENST00000492571 CDC42BPAQ5VT25 1732 aa15.66■□□□□ 0.1
TNFRSF9-203ENST00000492571 SUPT6HQ7KZ85 1726 aaKnown RBP15.66■□□□□ 0.1
TNFRSF9-203ENST00000492571 THEMISQ8N1K5 641 aaPredicted RBP15.66■□□□□ 0.1
TNFRSF9-203ENST00000492571 CEP170BQ9Y4F5 1589 aaPredicted RBP15.66■□□□□ 0.1
TNFRSF9-203ENST00000492571 KIF3BO15066 747 aa15.65■□□□□ 0.1
TNFRSF9-203ENST00000492571 WASHC2CQ9Y4E1 1318 aa15.65■□□□□ 0.1
TNFRSF9-203ENST00000492571 RSPH4AQ5TD94 716 aa15.64■□□□□ 0.09
TNFRSF9-203ENST00000492571 CLTCQ00610 1675 aaKnown RBP15.63■□□□□ 0.09
TNFRSF9-203ENST00000492571 HSPA1LP34931 641 aa15.63■□□□□ 0.09
TNFRSF9-203ENST00000492571 A2ML1A8K2U0 1454 aa15.63■□□□□ 0.09
TNFRSF9-203ENST00000492571 ZNF644Q9H582 1327 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF9-203ENST00000492571 DHX29Q7Z478 1369 aaKnown RBP15.62■□□□□ 0.09
TNFRSF9-203ENST00000492571 TNRQ92752 1358 aa15.62■□□□□ 0.09
TNFRSF9-203ENST00000492571 MYO3AQ8NEV4 1616 aa15.61■□□□□ 0.09
TNFRSF9-203ENST00000492571 RTEL1-TNFRSF6BF6WH68 1400 aa15.61■□□□□ 0.09
TNFRSF9-203ENST00000492571 FBXO31Q5XUX0 539 aaPredicted RBP15.61■□□□□ 0.09
TNFRSF9-203ENST00000492571 PLXNC1O60486 1568 aa15.61■□□□□ 0.09
TNFRSF9-203ENST00000492571 TSPY4P0CV99 314 aa15.6■□□□□ 0.09
TNFRSF9-203ENST00000492571 TSPY10P0CW01 314 aa15.6■□□□□ 0.09
TNFRSF9-203ENST00000492571 INO80Q9ULG1 1556 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF9-203ENST00000492571 ZNF142P52746 1687 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF9-203ENST00000492571 CPS1P31327 1500 aa15.58■□□□□ 0.09
TNFRSF9-203ENST00000492571 SHANK2Q9UPX8 1470 aa15.58■□□□□ 0.08
TNFRSF9-203ENST00000492571 CLEC11AQ9Y240 323 aa15.57■□□□□ 0.08
TNFRSF9-203ENST00000492571 SPDYE1Q8NFV5 336 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF9-203ENST00000492571 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.56■□□□□ 0.08
TNFRSF9-203ENST00000492571 ADGBQ8N7X0 1667 aa15.55■□□□□ 0.08
TNFRSF9-203ENST00000492571 DNMT1P26358 1616 aaKnown RBP15.55■□□□□ 0.08
TNFRSF9-203ENST00000492571 MBD5Q9P267 1494 aa15.55■□□□□ 0.08
TNFRSF9-203ENST00000492571 FAM135AQ9P2D6 1515 aa15.54■□□□□ 0.08
TNFRSF9-203ENST00000492571 MIA2Q96PC5 1412 aa15.54■□□□□ 0.08
TNFRSF9-203ENST00000492571 PZPP20742 1482 aa15.53■□□□□ 0.08
TNFRSF9-203ENST00000492571 NLRP1Q9C000 1473 aa15.52■□□□□ 0.08
TNFRSF9-203ENST00000492571 NPHP4O75161 1426 aaPredicted RBP15.51■□□□□ 0.07
TNFRSF9-203ENST00000492571 CEP162Q5TB80 1403 aa15.51■□□□□ 0.07
TNFRSF9-203ENST00000492571 KDM5DQ9BY66 1539 aa15.51■□□□□ 0.07
TNFRSF9-203ENST00000492571 CCDC141Q6ZP82 1450 aa15.51■□□□□ 0.07
TNFRSF9-203ENST00000492571 EHBP1L1Q8N3D4 1523 aa15.5■□□□□ 0.07
TNFRSF9-203ENST00000492571 UGGT1Q9NYU2 1555 aa15.49■□□□□ 0.07
TNFRSF9-203ENST00000492571 MED1Q15648 1581 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF9-203ENST00000492571 TIAM1Q13009 1591 aa15.48■□□□□ 0.07
TNFRSF9-203ENST00000492571 MED14O60244 1454 aa15.46■□□□□ 0.07
TNFRSF9-203ENST00000492571 NEURL4Q96JN8 1562 aa15.45■□□□□ 0.06
TNFRSF9-203ENST00000492571 EID1Q9Y6B2 187 aa15.44■□□□□ 0.06
TNFRSF9-203ENST00000492571 CAMSAP2Q08AD1 1489 aa15.44■□□□□ 0.06
TNFRSF9-203ENST00000492571 POLR1AO95602 1720 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF9-203ENST00000492571 NCOA2Q15596 1464 aa15.43■□□□□ 0.06
TNFRSF9-203ENST00000492571 HAX1O00165 279 aa15.42■□□□□ 0.06
TNFRSF9-203ENST00000492571 PRKAR2AP13861 404 aaKnown RBP15.42■□□□□ 0.06
TNFRSF9-203ENST00000492571 TXNDC2Q86VQ3 553 aa15.42■□□□□ 0.06
TNFRSF9-203ENST00000492571 SP7Q8TDD2 431 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF9-203ENST00000492571 VWDEQ8N2E2 1590 aa15.41■□□□□ 0.06
TNFRSF9-203ENST00000492571 STAG3Q9UJ98 1225 aa15.41■□□□□ 0.06
TNFRSF9-203ENST00000492571 DEPDC5O75140 1603 aa15.4■□□□□ 0.06
TNFRSF9-203ENST00000492571 LRRC7Q96NW7 1537 aa15.38■□□□□ 0.05
TNFRSF9-203ENST00000492571 IQGAP1P46940 1657 aa15.36■□□□□ 0.05
TNFRSF9-203ENST00000492571 ARHGEF5Q12774 1597 aa15.36■□□□□ 0.05
TNFRSF9-203ENST00000492571 SCAF11Q99590 1463 aaKnown RBP15.35■□□□□ 0.05
TNFRSF9-203ENST00000492571 ERVK-7P63135 1459 aa15.34■□□□□ 0.05
TNFRSF9-203ENST00000492571 ABCC3O15438 1527 aa15.34■□□□□ 0.05
TNFRSF9-203ENST00000492571 LTKP29376 864 aa15.34■□□□□ 0.05
TNFRSF9-203ENST00000492571 EVX2Q03828 476 aa15.34■□□□□ 0.05
TNFRSF9-203ENST00000492571 CHADLQ6NUI6 762 aa15.32■□□□□ 0.04
TNFRSF9-203ENST00000492571 RNF17Q9BXT8 1623 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms