RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 C3P01024 1663 aa11.07□□□□□ -0.64
PDLIM1-204ENST00000492511 ANKRD30AQ9BXX3 1397 aa11.06□□□□□ -0.64
PDLIM1-204ENST00000492511 CROCC2H7BZ55 1655 aa11.06□□□□□ -0.64
PDLIM1-204ENST00000492511 WASHC2CQ9Y4E1 1318 aa11.06□□□□□ -0.64
PDLIM1-204ENST00000492511 ADGRL2O95490 1459 aa11.06□□□□□ -0.64
PDLIM1-204ENST00000492511 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.05□□□□□ -0.64
PDLIM1-204ENST00000492511 FBXO31Q5XUX0 539 aaPredicted RBP11.05□□□□□ -0.64
PDLIM1-204ENST00000492511 CLTCQ00610 1675 aaKnown RBP11.04□□□□□ -0.64
PDLIM1-204ENST00000492511 NPATQ14207 1427 aa11.04□□□□□ -0.64
PDLIM1-204ENST00000492511 ERBINQ96RT1 1412 aa11.04□□□□□ -0.64
PDLIM1-204ENST00000492511 MROH2AA6NES4 1674 aa11.04□□□□□ -0.64
PDLIM1-204ENST00000492511 RRBP1Q9P2E9 1410 aaKnown RBP11.03□□□□□ -0.64
PDLIM1-204ENST00000492511 MROH1Q8NDA8 1641 aa11.03□□□□□ -0.64
PDLIM1-204ENST00000492511 RNF17Q9BXT8 1623 aaKnown RBP11.03□□□□□ -0.64
PDLIM1-204ENST00000492511 PREX1Q8TCU6 1659 aa11.03□□□□□ -0.64
PDLIM1-204ENST00000492511 EIF2AK4Q9P2K8 1649 aaKnown RBP11.02□□□□□ -0.64
PDLIM1-204ENST00000492511 ITGAEP38570 1179 aa11.02□□□□□ -0.65
PDLIM1-204ENST00000492511 KDM5DQ9BY66 1539 aa11.02□□□□□ -0.65
PDLIM1-204ENST00000492511 UHRF1BP1Q6BDS2 1440 aa11.01□□□□□ -0.65
PDLIM1-204ENST00000492511 ABCC3O15438 1527 aa11.01□□□□□ -0.65
PDLIM1-204ENST00000492511 FAM135AQ9P2D6 1515 aa11.01□□□□□ -0.65
PDLIM1-204ENST00000492511 CERKQ8TCT0 537 aa11.01□□□□□ -0.65
PDLIM1-204ENST00000492511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDLIM1-204ENST00000492511 ROCK1Q13464 1354 aa11.01□□□□□ -0.65
PDLIM1-204ENST00000492511 PZPP20742 1482 aa11□□□□□ -0.65
PDLIM1-204ENST00000492511 DMRT2Q9Y5R5 561 aa11□□□□□ -0.65
PDLIM1-204ENST00000492511 ANKRD50Q9ULJ7 1429 aa11□□□□□ -0.65
PDLIM1-204ENST00000492511 SETD1BQ9UPS6 1966 aaKnown RBP10.98□□□□□ -0.65
PDLIM1-204ENST00000492511 PRDM15P57071 1507 aaPredicted RBP10.98□□□□□ -0.65
PDLIM1-204ENST00000492511 TNRQ92752 1358 aa10.97□□□□□ -0.65
PDLIM1-204ENST00000492511 DEPDC5O75140 1603 aa10.97□□□□□ -0.65
PDLIM1-204ENST00000492511 VWDEQ8N2E2 1590 aa10.96□□□□□ -0.65
PDLIM1-204ENST00000492511 ARHGAP31Q2M1Z3 1444 aa10.96□□□□□ -0.65
PDLIM1-204ENST00000492511 LMTK2Q8IWU2 1503 aa10.94□□□□□ -0.66
PDLIM1-204ENST00000492511 ERVK-7P63135 1459 aa10.94□□□□□ -0.66
PDLIM1-204ENST00000492511 KANK1Q14678 1352 aa10.94□□□□□ -0.66
PDLIM1-204ENST00000492511 ZC3H13Q5T200 1668 aaKnown RBP10.94□□□□□ -0.66
PDLIM1-204ENST00000492511 MYO3AQ8NEV4 1616 aa10.94□□□□□ -0.66
PDLIM1-204ENST00000492511 SPATA31D1Q6ZQQ2 1576 aa10.94□□□□□ -0.66
PDLIM1-204ENST00000492511 A2ML1A8K2U0 1454 aa10.93□□□□□ -0.66
PDLIM1-204ENST00000492511 CEP152O94986 1710 aa10.93□□□□□ -0.66
PDLIM1-204ENST00000492511 NCKAP5LQ9HCH0 1330 aa10.93□□□□□ -0.66
PDLIM1-204ENST00000492511 CEP170BQ9Y4F5 1589 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1-204ENST00000492511 STRCQ7RTU9 1775 aa10.93□□□□□ -0.66
PDLIM1-204ENST00000492511 DISP3Q9P2K9 1392 aa10.92□□□□□ -0.66
PDLIM1-204ENST00000492511 CAMSAP1Q5T5Y3 1602 aa10.92□□□□□ -0.66
PDLIM1-204ENST00000492511 NAIPQ13075 1403 aa10.92□□□□□ -0.66
PDLIM1-204ENST00000492511 NLRP1Q9C000 1473 aa10.91□□□□□ -0.66
PDLIM1-204ENST00000492511 ZNF142P52746 1687 aaPredicted RBP10.91□□□□□ -0.66
PDLIM1-204ENST00000492511 NOS1P29475 1434 aa10.9□□□□□ -0.66
PDLIM1-204ENST00000492511 NUP155O75694 1391 aa10.9□□□□□ -0.67
PDLIM1-204ENST00000492511 PLA2R1Q13018 1463 aa10.89□□□□□ -0.67
PDLIM1-204ENST00000492511 IDI1Q13907 227 aa10.89□□□□□ -0.67
PDLIM1-204ENST00000492511 THEMISQ8N1K5 641 aaPredicted RBP10.89□□□□□ -0.67
PDLIM1-204ENST00000492511 PTPRTO14522 1441 aa10.89□□□□□ -0.67
PDLIM1-204ENST00000492511 UNC13BO14795 1591 aa10.89□□□□□ -0.67
PDLIM1-204ENST00000492511 EFCAB6Q5THR3 1501 aa10.89□□□□□ -0.67
PDLIM1-204ENST00000492511 HFM1A2PYH4 1435 aa10.88□□□□□ -0.67
PDLIM1-204ENST00000492511 PKD2Q13563 968 aa10.88□□□□□ -0.67
PDLIM1-204ENST00000492511 UGGT1Q9NYU2 1555 aa10.87□□□□□ -0.67
PDLIM1-204ENST00000492511 SOCS7O14512 581 aa10.86□□□□□ -0.67
PDLIM1-204ENST00000492511 IQSEC2Q5JU85 1478 aa10.86□□□□□ -0.67
PDLIM1-204ENST00000492511 RPRD2Q5VT52 1461 aaKnown RBP10.86□□□□□ -0.67
PDLIM1-204ENST00000492511 SYNMO15061 1565 aa10.86□□□□□ -0.67
PDLIM1-204ENST00000492511 ANKLE2Q86XL3 938 aa10.85□□□□□ -0.67
PDLIM1-204ENST00000492511 IQGAP3Q86VI3 1631 aa10.84□□□□□ -0.67
PDLIM1-204ENST00000492511 LTKP29376 864 aa10.84□□□□□ -0.67
PDLIM1-204ENST00000492511 SLC52A1Q9NWF4 448 aa10.84□□□□□ -0.67
PDLIM1-204ENST00000492511 TET3O43151 1660 aa10.84□□□□□ -0.67
PDLIM1-204ENST00000492511 CFAP65Q6ZU64 1925 aaKnown RBP10.83□□□□□ -0.68
PDLIM1-204ENST00000492511 NEURL4Q96JN8 1562 aa10.82□□□□□ -0.68
PDLIM1-204ENST00000492511 MED14O60244 1454 aa10.82□□□□□ -0.68
PDLIM1-204ENST00000492511 ARHGAP23Q9P227 1491 aa10.82□□□□□ -0.68
PDLIM1-204ENST00000492511 PIK3C2BO00750 1634 aa10.82□□□□□ -0.68
PDLIM1-204ENST00000492511 E9PCH4 1651 aa10.82□□□□□ -0.68
PDLIM1-204ENST00000492511 GCC2Q8IWJ2 1684 aa10.82□□□□□ -0.68
PDLIM1-204ENST00000492511 ZNF335Q9H4Z2 1342 aaPredicted RBP10.82□□□□□ -0.68
PDLIM1-204ENST00000492511 UBR1Q8IWV7 1749 aa10.81□□□□□ -0.68
PDLIM1-204ENST00000492511 TMEM2Q9UHN6 1383 aa10.81□□□□□ -0.68
PDLIM1-204ENST00000492511 SLIT1O75093 1534 aa10.81□□□□□ -0.68
PDLIM1-204ENST00000492511 TXNDC2Q86VQ3 553 aa10.81□□□□□ -0.68
PDLIM1-204ENST00000492511 TRIM52Q96A61 297 aa10.81□□□□□ -0.68
PDLIM1-204ENST00000492511 LTBP4Q8N2S1 1624 aa10.8□□□□□ -0.68
PDLIM1-204ENST00000492511 STAG3Q9UJ98 1225 aa10.8□□□□□ -0.68
PDLIM1-204ENST00000492511 NPHP4O75161 1426 aaPredicted RBP10.8□□□□□ -0.68
PDLIM1-204ENST00000492511 ILDR2Q71H61 639 aa10.79□□□□□ -0.68
PDLIM1-204ENST00000492511 SETD5Q9C0A6 1442 aa10.78□□□□□ -0.68
PDLIM1-204ENST00000492511 SLC4A1APQ9BWU0 796 aaKnown RBP10.78□□□□□ -0.68
PDLIM1-204ENST00000492511 SCAF11Q99590 1463 aaKnown RBP10.78□□□□□ -0.68
PDLIM1-204ENST00000492511 ADGRB3O60242 1522 aa10.78□□□□□ -0.68
PDLIM1-204ENST00000492511 EID1Q9Y6B2 187 aa10.77□□□□□ -0.69
PDLIM1-204ENST00000492511 ZFYVE9O95405 1425 aa10.76□□□□□ -0.69
PDLIM1-204ENST00000492511 CHGAP10645 457 aaKnown RBP10.76□□□□□ -0.69
PDLIM1-204ENST00000492511 FOXD1Q16676 465 aa10.76□□□□□ -0.69
PDLIM1-204ENST00000492511 MPHOSPH9Q99550 1183 aa10.76□□□□□ -0.69
PDLIM1-204ENST00000492511 TMEM131LA2VDJ0 1609 aa10.76□□□□□ -0.69
PDLIM1-204ENST00000492511 KDM5AP29375 1690 aaKnown RBP10.76□□□□□ -0.69
PDLIM1-204ENST00000492511 POLR1AO95602 1720 aaPredicted RBP10.75□□□□□ -0.69
PDLIM1-204ENST00000492511 RAB3GAP2Q9H2M9 1393 aa10.75□□□□□ -0.69
PDLIM1-204ENST00000492511 RIMS2Q9UQ26 1411 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms