RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 TNRQ92752 1358 aa25.56■■□□□ 1.68
CDK11A-220ENST00000492390 CCNB3Q8WWL7 1395 aa25.54■■□□□ 1.68
CDK11A-220ENST00000492390 FBXO31Q5XUX0 539 aaPredicted RBP25.52■■□□□ 1.68
CDK11A-220ENST00000492390 VWDEQ8N2E2 1590 aa25.52■■□□□ 1.68
CDK11A-220ENST00000492390 THEMISQ8N1K5 641 aaPredicted RBP25.51■■□□□ 1.67
CDK11A-220ENST00000492390 ALKQ9UM73 1620 aa25.51■■□□□ 1.67
CDK11A-220ENST00000492390 DHX29Q7Z478 1369 aaKnown RBP25.5■■□□□ 1.67
CDK11A-220ENST00000492390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.5■■□□□ 1.67
CDK11A-220ENST00000492390 PZPP20742 1482 aa25.49■■□□□ 1.67
CDK11A-220ENST00000492390 RTEL1-TNFRSF6BF6WH68 1400 aa25.49■■□□□ 1.67
CDK11A-220ENST00000492390 MED14O60244 1454 aa25.48■■□□□ 1.67
CDK11A-220ENST00000492390 NPHP4O75161 1426 aaPredicted RBP25.47■■□□□ 1.67
CDK11A-220ENST00000492390 FAM135AQ9P2D6 1515 aa25.47■■□□□ 1.67
CDK11A-220ENST00000492390 KIF3BO15066 747 aa25.44■■□□□ 1.66
CDK11A-220ENST00000492390 NLRP1Q9C000 1473 aa25.44■■□□□ 1.66
CDK11A-220ENST00000492390 MBD5Q9P267 1494 aa25.44■■□□□ 1.66
CDK11A-220ENST00000492390 MIA2Q96PC5 1412 aa25.44■■□□□ 1.66
CDK11A-220ENST00000492390 DEPDC5O75140 1603 aa25.44■■□□□ 1.66
CDK11A-220ENST00000492390 KDM5DQ9BY66 1539 aa25.43■■□□□ 1.66
CDK11A-220ENST00000492390 ZNF644Q9H582 1327 aaPredicted RBP25.42■■□□□ 1.66
CDK11A-220ENST00000492390 WASHC2CQ9Y4E1 1318 aa25.41■■□□□ 1.66
CDK11A-220ENST00000492390 UGGT1Q9NYU2 1555 aa25.41■■□□□ 1.66
CDK11A-220ENST00000492390 MTUS2Q5JR59 1369 aa25.41■■□□□ 1.66
CDK11A-220ENST00000492390 LRRC7Q96NW7 1537 aa25.39■■□□□ 1.66
CDK11A-220ENST00000492390 SENP3Q9H4L4 574 aaPredicted RBP25.37■■□□□ 1.65
CDK11A-220ENST00000492390 RGS17Q9UGC6 210 aaPredicted RBP25.36■■□□□ 1.65
CDK11A-220ENST00000492390 IQGAP1P46940 1657 aa25.36■■□□□ 1.65
CDK11A-220ENST00000492390 RNF17Q9BXT8 1623 aaKnown RBP25.35■■□□□ 1.65
CDK11A-220ENST00000492390 SYNMO15061 1565 aa25.33■■□□□ 1.65
CDK11A-220ENST00000492390 TIAM1Q13009 1591 aa25.33■■□□□ 1.65
CDK11A-220ENST00000492390 STRCP1A6NGW2 1772 aa25.31■■□□□ 1.64
CDK11A-220ENST00000492390 RSPH4AQ5TD94 716 aa25.31■■□□□ 1.64
CDK11A-220ENST00000492390 CCDC141Q6ZP82 1450 aa25.28■■□□□ 1.64
CDK11A-220ENST00000492390 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
CDK11A-220ENST00000492390 CEP162Q5TB80 1403 aa25.25■■□□□ 1.63
CDK11A-220ENST00000492390 EHBP1L1Q8N3D4 1523 aa25.24■■□□□ 1.63
CDK11A-220ENST00000492390 ZC3H13Q5T200 1668 aaKnown RBP25.2■■□□□ 1.62
CDK11A-220ENST00000492390 CAMSAP2Q08AD1 1489 aa25.18■■□□□ 1.62
CDK11A-220ENST00000492390 POTEAQ6S8J7 498 aa25.18■■□□□ 1.62
CDK11A-220ENST00000492390 FAM135BQ49AJ0 1406 aa25.18■■□□□ 1.62
CDK11A-220ENST00000492390 ERVK-7P63135 1459 aa25.17■■□□□ 1.62
CDK11A-220ENST00000492390 SCAF11Q99590 1463 aaKnown RBP25.17■■□□□ 1.62
CDK11A-220ENST00000492390 TSPY4P0CV99 314 aa25.17■■□□□ 1.62
CDK11A-220ENST00000492390 TSPY10P0CW01 314 aa25.17■■□□□ 1.62
CDK11A-220ENST00000492390 ABCC3O15438 1527 aa25.17■■□□□ 1.62
CDK11A-220ENST00000492390 LTKP29376 864 aa25.12■■□□□ 1.61
CDK11A-220ENST00000492390 TXNDC2Q86VQ3 553 aa25.12■■□□□ 1.61
CDK11A-220ENST00000492390 ARHGEF5Q12774 1597 aa25.12■■□□□ 1.61
CDK11A-220ENST00000492390 UBR1Q8IWV7 1749 aa25.12■■□□□ 1.61
CDK11A-220ENST00000492390 NCOA2Q15596 1464 aa25.1■■□□□ 1.61
CDK11A-220ENST00000492390 ARHGAP23Q9P227 1491 aa25.1■■□□□ 1.61
CDK11A-220ENST00000492390 SLIT1O75093 1534 aa25.1■■□□□ 1.61
CDK11A-220ENST00000492390 XIRP1Q702N8 1843 aaKnown RBP25.09■■□□□ 1.61
CDK11A-220ENST00000492390 EID1Q9Y6B2 187 aa25.07■■□□□ 1.6
CDK11A-220ENST00000492390 EIF2AK4Q9P2K8 1649 aaKnown RBP25.04■■□□□ 1.6
CDK11A-220ENST00000492390 TMEM94Q12767 1356 aa25.03■■□□□ 1.6
CDK11A-220ENST00000492390 MAST1Q9Y2H9 1570 aa25.01■■□□□ 1.59
CDK11A-220ENST00000492390 MROH1Q8NDA8 1641 aa25.01■■□□□ 1.59
CDK11A-220ENST00000492390 KCNA6P17658 529 aa24.99■■□□□ 1.59
CDK11A-220ENST00000492390 ARHGAP31Q2M1Z3 1444 aa24.99■■□□□ 1.59
CDK11A-220ENST00000492390 CFAP65Q6ZU64 1925 aaKnown RBP24.99■■□□□ 1.59
CDK11A-220ENST00000492390 ROBO1Q9Y6N7 1651 aa24.98■■□□□ 1.59
CDK11A-220ENST00000492390 TMEM2Q9UHN6 1383 aa24.98■■□□□ 1.59
CDK11A-220ENST00000492390 CEP152O94986 1710 aa24.98■■□□□ 1.59
CDK11A-220ENST00000492390 LRRC9Q6ZRR7 1453 aa24.97■■□□□ 1.59
CDK11A-220ENST00000492390 PROSER2Q86WR7 435 aaPredicted RBP24.95■■□□□ 1.58
CDK11A-220ENST00000492390 MAP3K1Q13233 1512 aa24.93■■□□□ 1.58
CDK11A-220ENST00000492390 SETD1AO15047 1707 aaKnown RBP24.92■■□□□ 1.58
CDK11A-220ENST00000492390 STAG3Q9UJ98 1225 aa24.92■■□□□ 1.58
CDK11A-220ENST00000492390 JCADQ9P266 1359 aa24.92■■□□□ 1.58
CDK11A-220ENST00000492390 DUOX2Q9NRD8 1548 aa24.91■■□□□ 1.58
CDK11A-220ENST00000492390 PIK3C2BO00750 1634 aa24.9■■□□□ 1.58
CDK11A-220ENST00000492390 PRDM15P57071 1507 aaPredicted RBP24.89■■□□□ 1.57
CDK11A-220ENST00000492390 RBM33Q96EV2 1170 aaKnown RBP24.88■■□□□ 1.57
CDK11A-220ENST00000492390 SLC26A8Q96RN1 970 aa24.87■■□□□ 1.57
CDK11A-220ENST00000492390 SLAIN2Q9P270 581 aa24.87■■□□□ 1.57
CDK11A-220ENST00000492390 MSH6P52701 1360 aa24.87■■□□□ 1.57
CDK11A-220ENST00000492390 NKTRP30414 1462 aaKnown RBP24.87■■□□□ 1.57
CDK11A-220ENST00000492390 TET3O43151 1660 aa24.87■■□□□ 1.57
CDK11A-220ENST00000492390 UPF1Q92900 1129 aaKnown RBP eCLIP24.86■■□□□ 1.57
CDK11A-220ENST00000492390 EFCAB6Q5THR3 1501 aa24.86■■□□□ 1.57
CDK11A-220ENST00000492390 KDM5AP29375 1690 aaKnown RBP24.85■■□□□ 1.57
CDK11A-220ENST00000492390 PHLPP1O60346 1717 aa24.84■■□□□ 1.57
CDK11A-220ENST00000492390 IDI1Q13907 227 aa24.83■■□□□ 1.57
CDK11A-220ENST00000492390 NWD1Q149M9 1564 aa24.82■■□□□ 1.56
CDK11A-220ENST00000492390 MYOM3Q5VTT5 1437 aa24.82■■□□□ 1.56
CDK11A-220ENST00000492390 ERBINQ96RT1 1412 aa24.81■■□□□ 1.56
CDK11A-220ENST00000492390 ZNF772Q68DY9 489 aaPredicted RBP24.81■■□□□ 1.56
CDK11A-220ENST00000492390 KIF15Q9NS87 1388 aa24.8■■□□□ 1.56
CDK11A-220ENST00000492390 SPATA31A6Q5VVP1 1343 aa24.8■■□□□ 1.56
CDK11A-220ENST00000492390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.79■■□□□ 1.561e-6■□□□□ 11
CDK11A-220ENST00000492390 KANK1Q14678 1352 aa24.79■■□□□ 1.56
CDK11A-220ENST00000492390 FGD6Q6ZV73 1430 aa24.78■■□□□ 1.56
CDK11A-220ENST00000492390 COL16A1Q07092 1604 aaPredicted RBP24.75■■□□□ 1.55
CDK11A-220ENST00000492390 MEX3CQ5U5Q3 659 aaKnown RBP24.75■■□□□ 1.55
CDK11A-220ENST00000492390 TRIM52Q96A61 297 aa24.75■■□□□ 1.55
CDK11A-220ENST00000492390 BCANQ96GW7 911 aa24.74■■□□□ 1.55
CDK11A-220ENST00000492390 RRP7BPQ9NSQ0 103 aa24.74■■□□□ 1.55
CDK11A-220ENST00000492390 LRP6O75581 1613 aa24.74■■□□□ 1.55
CDK11A-220ENST00000492390 LMTK2Q8IWU2 1503 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms