RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 NCOA1Q15788 1441 aa27.25■■□□□ 1.95
LMNB1-206ENST00000492190 MROH1Q8NDA8 1641 aa27.24■■□□□ 1.95
LMNB1-206ENST00000492190 ESF1Q9H501 851 aaKnown RBP27.24■■□□□ 1.95
LMNB1-206ENST00000492190 RRBP1Q9P2E9 1410 aaKnown RBP27.23■■□□□ 1.95
LMNB1-206ENST00000492190 ANKRD30AQ9BXX3 1397 aa27.22■■□□□ 1.95
LMNB1-206ENST00000492190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.22■■□□□ 1.959e-7■■■■□ 23.3
LMNB1-206ENST00000492190 PPP6R1Q9UPN7 881 aa27.21■■□□□ 1.95
LMNB1-206ENST00000492190 LMTK3Q96Q04 1460 aa27.2■■□□□ 1.95
LMNB1-206ENST00000492190 PREX1Q8TCU6 1659 aa27.2■■□□□ 1.94
LMNB1-206ENST00000492190 ZMYM3Q14202 1370 aa27.2■■□□□ 1.94
LMNB1-206ENST00000492190 ERBINQ96RT1 1412 aa27.19■■□□□ 1.94
LMNB1-206ENST00000492190 KDM5DQ9BY66 1539 aa27.17■■□□□ 1.94
LMNB1-206ENST00000492190 FAM135AQ9P2D6 1515 aa27.16■■□□□ 1.94
LMNB1-206ENST00000492190 CEP152O94986 1710 aa27.16■■□□□ 1.94
LMNB1-206ENST00000492190 DEPDC5O75140 1603 aa27.16■■□□□ 1.94
LMNB1-206ENST00000492190 ABCC3O15438 1527 aa27.12■■□□□ 1.93
LMNB1-206ENST00000492190 ZC3H13Q5T200 1668 aaKnown RBP27.12■■□□□ 1.93
LMNB1-206ENST00000492190 ITGAEP38570 1179 aa27.12■■□□□ 1.93
LMNB1-206ENST00000492190 PRDM15P57071 1507 aaPredicted RBP27.11■■□□□ 1.93
LMNB1-206ENST00000492190 CFAP65Q6ZU64 1925 aaKnown RBP27.11■■□□□ 1.93
LMNB1-206ENST00000492190 WASHC2CQ9Y4E1 1318 aa27.11■■□□□ 1.93
LMNB1-206ENST00000492190 ROCK1Q13464 1354 aa27.09■■□□□ 1.93
LMNB1-206ENST00000492190 NPATQ14207 1427 aa27.09■■□□□ 1.93
LMNB1-206ENST00000492190 ANKRD50Q9ULJ7 1429 aa27.07■■□□□ 1.92
LMNB1-206ENST00000492190 CAMSAP1Q5T5Y3 1602 aa27.06■■□□□ 1.92
LMNB1-206ENST00000492190 HSPA2P54652 639 aa27.05■■□□□ 1.92
LMNB1-206ENST00000492190 PZPP20742 1482 aa27.05■■□□□ 1.92
LMNB1-206ENST00000492190 UHRF1BP1Q6BDS2 1440 aa27.04■■□□□ 1.92
LMNB1-206ENST00000492190 VWDEQ8N2E2 1590 aa27.04■■□□□ 1.92
LMNB1-206ENST00000492190 MYO3AQ8NEV4 1616 aa27.03■■□□□ 1.92
LMNB1-206ENST00000492190 FBXO31Q5XUX0 539 aaPredicted RBP27.02■■□□□ 1.92
LMNB1-206ENST00000492190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.01■■□□□ 1.912e-6■■□□□ 11.6
LMNB1-206ENST00000492190 ZNF142P52746 1687 aaPredicted RBP26.98■■□□□ 1.91
LMNB1-206ENST00000492190 UNC13BO14795 1591 aa26.97■■□□□ 1.91
LMNB1-206ENST00000492190 LMTK2Q8IWU2 1503 aa26.95■■□□□ 1.91
LMNB1-206ENST00000492190 STRCQ7RTU9 1775 aa26.95■■□□□ 1.9
LMNB1-206ENST00000492190 GCC2Q8IWJ2 1684 aa26.94■■□□□ 1.9
LMNB1-206ENST00000492190 KANK1Q14678 1352 aa26.94■■□□□ 1.9
LMNB1-206ENST00000492190 SPATA31D1Q6ZQQ2 1576 aa26.93■■□□□ 1.9
LMNB1-206ENST00000492190 CEP170BQ9Y4F5 1589 aaPredicted RBP26.93■■□□□ 1.9
LMNB1-206ENST00000492190 TNRQ92752 1358 aa26.93■■□□□ 1.9
LMNB1-206ENST00000492190 ERVK-7P63135 1459 aa26.92■■□□□ 1.9
LMNB1-206ENST00000492190 ARHGAP31Q2M1Z3 1444 aa26.91■■□□□ 1.9
LMNB1-206ENST00000492190 NAIPQ13075 1403 aa26.9■■□□□ 1.9
LMNB1-206ENST00000492190 EFCAB6Q5THR3 1501 aa26.89■■□□□ 1.89
LMNB1-206ENST00000492190 TET3O43151 1660 aa26.88■■□□□ 1.89
LMNB1-206ENST00000492190 A2ML1A8K2U0 1454 aa26.87■■□□□ 1.89
LMNB1-206ENST00000492190 IQGAP3Q86VI3 1631 aa26.87■■□□□ 1.89
LMNB1-206ENST00000492190 HFM1A2PYH4 1435 aa26.83■■□□□ 1.89
LMNB1-206ENST00000492190 NLRP1Q9C000 1473 aa26.81■■□□□ 1.88
LMNB1-206ENST00000492190 E9PCH4 1651 aa26.81■■□□□ 1.88
LMNB1-206ENST00000492190 SYNMO15061 1565 aa26.8■■□□□ 1.88
LMNB1-206ENST00000492190 NUP155O75694 1391 aa26.78■■□□□ 1.88
LMNB1-206ENST00000492190 UBR1Q8IWV7 1749 aa26.76■■□□□ 1.88
LMNB1-206ENST00000492190 NOS1P29475 1434 aa26.76■■□□□ 1.87
LMNB1-206ENST00000492190 UGGT1Q9NYU2 1555 aa26.75■■□□□ 1.87
LMNB1-206ENST00000492190 PLA2R1Q13018 1463 aa26.74■■□□□ 1.87
LMNB1-206ENST00000492190 RPRD2Q5VT52 1461 aaKnown RBP26.74■■□□□ 1.87
LMNB1-206ENST00000492190 PIK3C2BO00750 1634 aa26.74■■□□□ 1.87
LMNB1-206ENST00000492190 POLR1AO95602 1720 aaPredicted RBP26.72■■□□□ 1.87
LMNB1-206ENST00000492190 NCKAP5LQ9HCH0 1330 aa26.7■■□□□ 1.87
LMNB1-206ENST00000492190 MYO5BQ9ULV0 1848 aa26.67■■□□□ 1.86
LMNB1-206ENST00000492190 NEURL4Q96JN8 1562 aa26.67■■□□□ 1.86
LMNB1-206ENST00000492190 PTPRTO14522 1441 aa26.66■■□□□ 1.86
LMNB1-206ENST00000492190 IDI1Q13907 227 aa26.66■■□□□ 1.86
LMNB1-206ENST00000492190 KDM5AP29375 1690 aaKnown RBP26.66■■□□□ 1.86
LMNB1-206ENST00000492190 THEMISQ8N1K5 641 aaPredicted RBP26.65■■□□□ 1.86
LMNB1-206ENST00000492190 SPHKAPQ2M3C7 1700 aa26.63■■□□□ 1.85
LMNB1-206ENST00000492190 PKD2Q13563 968 aa26.63■■□□□ 1.85
LMNB1-206ENST00000492190 DMRT2Q9Y5R5 561 aa26.63■■□□□ 1.85
LMNB1-206ENST00000492190 TRIM52Q96A61 297 aa26.6■■□□□ 1.85
LMNB1-206ENST00000492190 ADGRB3O60242 1522 aa26.6■■□□□ 1.85
LMNB1-206ENST00000492190 ARHGAP23Q9P227 1491 aa26.59■■□□□ 1.85
LMNB1-206ENST00000492190 SLIT1O75093 1534 aa26.59■■□□□ 1.85
LMNB1-206ENST00000492190 SETD5Q9C0A6 1442 aa26.58■■□□□ 1.85
LMNB1-206ENST00000492190 SLC52A1Q9NWF4 448 aa26.58■■□□□ 1.85
LMNB1-206ENST00000492190 TMEM131LA2VDJ0 1609 aa26.56■■□□□ 1.84
LMNB1-206ENST00000492190 ANKLE2Q86XL3 938 aa26.55■■□□□ 1.84
LMNB1-206ENST00000492190 MED14O60244 1454 aa26.54■■□□□ 1.84
LMNB1-206ENST00000492190 IQGAP1P46940 1657 aa26.53■■□□□ 1.84
LMNB1-206ENST00000492190 TMEM2Q9UHN6 1383 aa26.51■■□□□ 1.83
LMNB1-206ENST00000492190 LTKP29376 864 aa26.51■■□□□ 1.83
LMNB1-206ENST00000492190 STAG3Q9UJ98 1225 aa26.51■■□□□ 1.83
LMNB1-206ENST00000492190 RAB3GAP2Q9H2M9 1393 aa26.5■■□□□ 1.83
LMNB1-206ENST00000492190 SLC4A1APQ9BWU0 796 aaKnown RBP26.5■■□□□ 1.83
LMNB1-206ENST00000492190 CLTCL1P53675 1640 aa26.5■■□□□ 1.83
LMNB1-206ENST00000492190 SCAF11Q99590 1463 aaKnown RBP26.49■■□□□ 1.83
LMNB1-206ENST00000492190 NPHP4O75161 1426 aaPredicted RBP26.49■■□□□ 1.83
LMNB1-206ENST00000492190 LTBP4Q8N2S1 1624 aa26.49■■□□□ 1.83
LMNB1-206ENST00000492190 TRPM2O94759 1503 aa26.49■■□□□ 1.83
LMNB1-206ENST00000492190 TXNDC2Q86VQ3 553 aa26.46■■□□□ 1.83
LMNB1-206ENST00000492190 ZFYVE9O95405 1425 aa26.44■■□□□ 1.82
LMNB1-206ENST00000492190 KIF1BO60333 1816 aa26.44■■□□□ 1.82
LMNB1-206ENST00000492190 ZNF335Q9H4Z2 1342 aaPredicted RBP26.43■■□□□ 1.82
LMNB1-206ENST00000492190 FOXD1Q16676 465 aa26.43■■□□□ 1.82
LMNB1-206ENST00000492190 MPHOSPH9Q99550 1183 aa26.43■■□□□ 1.82
LMNB1-206ENST00000492190 CHGAP10645 457 aaKnown RBP26.41■■□□□ 1.82
LMNB1-206ENST00000492190 EID1Q9Y6B2 187 aa26.4■■□□□ 1.82
LMNB1-206ENST00000492190 STRCP1A6NGW2 1772 aa26.4■■□□□ 1.82
LMNB1-206ENST00000492190 RIMS2Q9UQ26 1411 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms