RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 NLRP1Q9C000 1473 aa19.55■□□□□ 0.72
CACNA1C-228ENST00000492150 UGGT1Q9NYU2 1555 aa19.55■□□□□ 0.72
CACNA1C-228ENST00000492150 INO80Q9ULG1 1556 aaPredicted RBP19.55■□□□□ 0.72
CACNA1C-228ENST00000492150 ZC3H13Q5T200 1668 aaKnown RBP19.55■□□□□ 0.72
CACNA1C-228ENST00000492150 FAM135AQ9P2D6 1515 aa19.55■□□□□ 0.72
CACNA1C-228ENST00000492150 PZPP20742 1482 aa19.54■□□□□ 0.72
CACNA1C-228ENST00000492150 GGT6Q6P531 493 aa19.53■□□□□ 0.72
CACNA1C-228ENST00000492150 ROBO1Q9Y6N7 1651 aa19.52■□□□□ 0.72
CACNA1C-228ENST00000492150 SPAG9O60271 1321 aaKnown RBP19.52■□□□□ 0.72
CACNA1C-228ENST00000492150 CDC42BPAQ5VT25 1732 aa19.52■□□□□ 0.72
CACNA1C-228ENST00000492150 CDK12Q9NYV4 1490 aaPredicted RBP19.51■□□□□ 0.71
CACNA1C-228ENST00000492150 ADGBQ8N7X0 1667 aa19.51■□□□□ 0.71
CACNA1C-228ENST00000492150 FMN1Q68DA7 1419 aa19.51■□□□□ 0.71
CACNA1C-228ENST00000492150 KDM5DQ9BY66 1539 aa19.5■□□□□ 0.71
CACNA1C-228ENST00000492150 SYCP2Q9BX26 1530 aa19.48■□□□□ 0.71
CACNA1C-228ENST00000492150 ZNF772Q68DY9 489 aaPredicted RBP19.47■□□□□ 0.71
CACNA1C-228ENST00000492150 JCADQ9P266 1359 aa19.46■□□□□ 0.71
CACNA1C-228ENST00000492150 MIA2Q96PC5 1412 aa19.46■□□□□ 0.71
CACNA1C-228ENST00000492150 LRRC9Q6ZRR7 1453 aa19.46■□□□□ 0.71
CACNA1C-228ENST00000492150 LRRIQ1Q96JM4 1722 aa19.45■□□□□ 0.7
CACNA1C-228ENST00000492150 TRIM52Q96A61 297 aa19.45■□□□□ 0.7
CACNA1C-228ENST00000492150 FBXO31Q5XUX0 539 aaPredicted RBP19.44■□□□□ 0.7
CACNA1C-228ENST00000492150 ATP1B4Q9UN42 357 aaPredicted RBP19.44■□□□□ 0.7
CACNA1C-228ENST00000492150 PHLPP1O60346 1717 aa19.42■□□□□ 0.7
CACNA1C-228ENST00000492150 KIAA1107Q9UPP5 1409 aa19.42■□□□□ 0.7
CACNA1C-228ENST00000492150 ARHGAP35Q9NRY4 1499 aa19.41■□□□□ 0.7
CACNA1C-228ENST00000492150 UBTFP17480 764 aaKnown RBP19.41■□□□□ 0.7
CACNA1C-228ENST00000492150 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
CACNA1C-228ENST00000492150 LRP6O75581 1613 aa19.39■□□□□ 0.69
CACNA1C-228ENST00000492150 PLEKHH2Q8IVE3 1493 aa19.38■□□□□ 0.69
CACNA1C-228ENST00000492150 SPATA31A6Q5VVP1 1343 aa19.37■□□□□ 0.69
CACNA1C-228ENST00000492150 RXRBP28702 533 aa19.37■□□□□ 0.69
CACNA1C-228ENST00000492150 COL16A1Q07092 1604 aaPredicted RBP19.36■□□□□ 0.69
CACNA1C-228ENST00000492150 MAP3K1Q13233 1512 aa19.35■□□□□ 0.69
CACNA1C-228ENST00000492150 SCAF11Q99590 1463 aaKnown RBP19.35■□□□□ 0.69
CACNA1C-228ENST00000492150 FGD6Q6ZV73 1430 aa19.35■□□□□ 0.69
CACNA1C-228ENST00000492150 FOXD1Q16676 465 aa19.35■□□□□ 0.69
CACNA1C-228ENST00000492150 HNRNPMP52272 730 aaKnown RBP eCLIP19.33■□□□□ 0.68
CACNA1C-228ENST00000492150 TMEM94Q12767 1356 aa19.32■□□□□ 0.68
CACNA1C-228ENST00000492150 UBR1Q8IWV7 1749 aa19.31■□□□□ 0.68
CACNA1C-228ENST00000492150 SHPRHQ149N8 1683 aa19.3■□□□□ 0.68
CACNA1C-228ENST00000492150 SETBP1Q9Y6X0 1596 aa19.3■□□□□ 0.68
CACNA1C-228ENST00000492150 DHX29Q7Z478 1369 aaKnown RBP19.3■□□□□ 0.68
CACNA1C-228ENST00000492150 GPATCH8Q9UKJ3 1502 aaKnown RBP19.3■□□□□ 0.68
CACNA1C-228ENST00000492150 CCDC18Q5T9S5 1454 aa19.29■□□□□ 0.68
CACNA1C-228ENST00000492150 ZRANB1Q9UGI0 708 aa19.29■□□□□ 0.68
CACNA1C-228ENST00000492150 ZNF777Q9ULD5 760 aaPredicted RBP19.29■□□□□ 0.68
CACNA1C-228ENST00000492150 SLIT1O75093 1534 aa19.29■□□□□ 0.68
CACNA1C-228ENST00000492150 ARHGAP23Q9P227 1491 aa19.28■□□□□ 0.68
CACNA1C-228ENST00000492150 MEX3CQ5U5Q3 659 aaKnown RBP19.28■□□□□ 0.68
CACNA1C-228ENST00000492150 RTEL1-TNFRSF6BF6WH68 1400 aa19.27■□□□□ 0.68
CACNA1C-228ENST00000492150 TIAM1Q13009 1591 aa19.26■□□□□ 0.67
CACNA1C-228ENST00000492150 WASHC2CQ9Y4E1 1318 aa19.25■□□□□ 0.67
CACNA1C-228ENST00000492150 RGS12O14924 1447 aa19.25■□□□□ 0.67
CACNA1C-228ENST00000492150 ABCC3O15438 1527 aa19.24■□□□□ 0.67
CACNA1C-228ENST00000492150 PRDM15P57071 1507 aaPredicted RBP19.24■□□□□ 0.67
CACNA1C-228ENST00000492150 CHIC1Q5VXU3 224 aa19.23■□□□□ 0.67
CACNA1C-228ENST00000492150 NCOA2Q15596 1464 aa19.22■□□□□ 0.67
CACNA1C-228ENST00000492150 KIF3BO15066 747 aa19.21■□□□□ 0.67
CACNA1C-228ENST00000492150 LTKP29376 864 aa19.21■□□□□ 0.67
CACNA1C-228ENST00000492150 CASKIN1Q8WXD9 1431 aa19.21■□□□□ 0.67
CACNA1C-228ENST00000492150 NKTRP30414 1462 aaKnown RBP19.21■□□□□ 0.67
CACNA1C-228ENST00000492150 SLAIN2Q9P270 581 aa19.2■□□□□ 0.66
CACNA1C-228ENST00000492150 ERVK-7P63135 1459 aa19.2■□□□□ 0.66
CACNA1C-228ENST00000492150 MSH6P52701 1360 aa19.19■□□□□ 0.66
CACNA1C-228ENST00000492150 NWD1Q149M9 1564 aa19.19■□□□□ 0.66
CACNA1C-228ENST00000492150 AHDC1Q5TGY3 1603 aaPredicted RBP19.19■□□□□ 0.66
CACNA1C-228ENST00000492150 KCNA6P17658 529 aa19.19■□□□□ 0.66
CACNA1C-228ENST00000492150 LRP5O75197 1615 aa19.18■□□□□ 0.66
CACNA1C-228ENST00000492150 TXNDC2Q86VQ3 553 aa19.18■□□□□ 0.66
CACNA1C-228ENST00000492150 ATAD2Q6PL18 1390 aa19.18■□□□□ 0.66
CACNA1C-228ENST00000492150 MBD5Q9P267 1494 aa19.16■□□□□ 0.66
CACNA1C-228ENST00000492150 CAMSAP2Q08AD1 1489 aa19.16■□□□□ 0.66
CACNA1C-228ENST00000492150 RBM6P78332 1123 aaKnown RBP19.15■□□□□ 0.66
CACNA1C-228ENST00000492150 PROSER2Q86WR7 435 aaPredicted RBP19.15■□□□□ 0.66
CACNA1C-228ENST00000492150 CFDP1Q9UEE9 299 aaPredicted RBP19.15■□□□□ 0.66
CACNA1C-228ENST00000492150 KDM5AP29375 1690 aaKnown RBP19.14■□□□□ 0.66
CACNA1C-228ENST00000492150 RBM33Q96EV2 1170 aaKnown RBP19.13■□□□□ 0.65
CACNA1C-228ENST00000492150 EID1Q9Y6B2 187 aa19.13■□□□□ 0.65
CACNA1C-228ENST00000492150 AFF2P51816 1311 aa19.13■□□□□ 0.65
CACNA1C-228ENST00000492150 DIP2AQ14689 1571 aa19.12■□□□□ 0.65
CACNA1C-228ENST00000492150 NUTM2BA6NNL0 878 aaPredicted RBP19.12■□□□□ 0.65
CACNA1C-228ENST00000492150 NUTM2EB1AL46 878 aaPredicted RBP19.12■□□□□ 0.65
CACNA1C-228ENST00000492150 NUTM2DQ5VT03 806 aaPredicted RBP19.12■□□□□ 0.65
CACNA1C-228ENST00000492150 NUTM2AQ8IVF1 878 aaPredicted RBP19.12■□□□□ 0.65
CACNA1C-228ENST00000492150 TET3O43151 1660 aa19.11■□□□□ 0.65
CACNA1C-228ENST00000492150 FYCO1Q9BQS8 1478 aa19.09■□□□□ 0.65
CACNA1C-228ENST00000492150 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
CACNA1C-228ENST00000492150 TMEM2Q9UHN6 1383 aa19.06■□□□□ 0.64
CACNA1C-228ENST00000492150 CCDC125Q86Z20 511 aa19.06■□□□□ 0.64
CACNA1C-228ENST00000492150 CFAP65Q6ZU64 1925 aaKnown RBP19.06■□□□□ 0.64
CACNA1C-228ENST00000492150 EP400Q96L91 3159 aa19.05■□□□□ 0.64
CACNA1C-228ENST00000492150 QTRT2Q9H974 415 aaKnown RBP19.05■□□□□ 0.64
CACNA1C-228ENST00000492150 NCOA3Q9Y6Q9 1424 aa19.05■□□□□ 0.64
CACNA1C-228ENST00000492150 NGLY1Q96IV0 654 aa19.03■□□□□ 0.64
CACNA1C-228ENST00000492150 CCDC141Q6ZP82 1450 aa19.02■□□□□ 0.63
CACNA1C-228ENST00000492150 PIK3C2BO00750 1634 aa19.01■□□□□ 0.63
CACNA1C-228ENST00000492150 CHD2O14647 1828 aaKnown RBP19■□□□□ 0.63
CACNA1C-228ENST00000492150 EIF2AK4Q9P2K8 1649 aaKnown RBP19■□□□□ 0.63
CACNA1C-228ENST00000492150 CEP152O94986 1710 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms