RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 RNF17Q9BXT8 1623 aaKnown RBP19.85■□□□□ 0.77
SEC61A1-206ENST00000491668 CROCC2H7BZ55 1655 aa19.84■□□□□ 0.77
SEC61A1-206ENST00000491668 FBXO31Q5XUX0 539 aaPredicted RBP19.84■□□□□ 0.77
SEC61A1-206ENST00000491668 FAM135AQ9P2D6 1515 aa19.84■□□□□ 0.77
SEC61A1-206ENST00000491668 ZNF142P52746 1687 aaPredicted RBP19.84■□□□□ 0.77
SEC61A1-206ENST00000491668 MROH1Q8NDA8 1641 aa19.84■□□□□ 0.77
SEC61A1-206ENST00000491668 SHANK2Q9UPX8 1470 aa19.83■□□□□ 0.76
SEC61A1-206ENST00000491668 CAMSAP1Q5T5Y3 1602 aa19.83■□□□□ 0.76
SEC61A1-206ENST00000491668 WASHC2CQ9Y4E1 1318 aa19.82■□□□□ 0.76
SEC61A1-206ENST00000491668 PZPP20742 1482 aa19.82■□□□□ 0.76
SEC61A1-206ENST00000491668 FBXO41Q8TF61 875 aa19.82■□□□□ 0.76
SEC61A1-206ENST00000491668 DNMT1P26358 1616 aaKnown RBP19.82■□□□□ 0.76
SEC61A1-206ENST00000491668 DAPK1P53355 1430 aa19.82■□□□□ 0.76
SEC61A1-206ENST00000491668 CEP170BQ9Y4F5 1589 aaPredicted RBP19.82■□□□□ 0.76
SEC61A1-206ENST00000491668 EIF2AK4Q9P2K8 1649 aaKnown RBP19.81■□□□□ 0.76
SEC61A1-206ENST00000491668 PTPRTO14522 1441 aa19.8■□□□□ 0.76
SEC61A1-206ENST00000491668 DMRT2Q9Y5R5 561 aa19.8■□□□□ 0.76
SEC61A1-206ENST00000491668 ABCC3O15438 1527 aa19.8■□□□□ 0.76
SEC61A1-206ENST00000491668 DUOX2Q9NRD8 1548 aa19.8■□□□□ 0.76
SEC61A1-206ENST00000491668 KIF15Q9NS87 1388 aa19.79■□□□□ 0.76
SEC61A1-206ENST00000491668 CERKQ8TCT0 537 aa19.77■□□□□ 0.76
SEC61A1-206ENST00000491668 RRP7BPQ9NSQ0 103 aa19.77■□□□□ 0.76
SEC61A1-206ENST00000491668 TNRQ92752 1358 aa19.77■□□□□ 0.76
SEC61A1-206ENST00000491668 A2ML1A8K2U0 1454 aa19.77■□□□□ 0.76
SEC61A1-206ENST00000491668 NCKAP5LQ9HCH0 1330 aa19.76■□□□□ 0.75
SEC61A1-206ENST00000491668 PLA2R1Q13018 1463 aa19.75■□□□□ 0.75
SEC61A1-206ENST00000491668 ZC3H13Q5T200 1668 aaKnown RBP19.74■□□□□ 0.75
SEC61A1-206ENST00000491668 CHIC2Q9UKJ5 165 aa19.73■□□□□ 0.75
SEC61A1-206ENST00000491668 ERBINQ96RT1 1412 aa19.73■□□□□ 0.75
SEC61A1-206ENST00000491668 CEP152O94986 1710 aa19.72■□□□□ 0.75
SEC61A1-206ENST00000491668 LTBP4Q8N2S1 1624 aa19.72■□□□□ 0.75
SEC61A1-206ENST00000491668 PRDM15P57071 1507 aaPredicted RBP19.71■□□□□ 0.75
SEC61A1-206ENST00000491668 DEPDC5O75140 1603 aa19.7■□□□□ 0.74
SEC61A1-206ENST00000491668 SPATA31D1Q6ZQQ2 1576 aa19.7■□□□□ 0.74
SEC61A1-206ENST00000491668 ANKRD30AQ9BXX3 1397 aa19.69■□□□□ 0.74
SEC61A1-206ENST00000491668 ADGRL2O95490 1459 aa19.68■□□□□ 0.74
SEC61A1-206ENST00000491668 ERVK-7P63135 1459 aa19.68■□□□□ 0.74
SEC61A1-206ENST00000491668 PKD2Q13563 968 aa19.68■□□□□ 0.74
SEC61A1-206ENST00000491668 FAM50AQ14320 339 aaKnown RBP19.68■□□□□ 0.74
SEC61A1-206ENST00000491668 NLRP1Q9C000 1473 aa19.67■□□□□ 0.74
SEC61A1-206ENST00000491668 NEURL4Q96JN8 1562 aa19.66■□□□□ 0.74
SEC61A1-206ENST00000491668 PPARGC1BQ86YN6 1023 aaKnown RBP19.64■□□□□ 0.73
SEC61A1-206ENST00000491668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.64■□□□□ 0.736e-7■□□□□ 10.6
SEC61A1-206ENST00000491668 ARHGAP31Q2M1Z3 1444 aa19.64■□□□□ 0.73
SEC61A1-206ENST00000491668 VWDEQ8N2E2 1590 aa19.64■□□□□ 0.73
SEC61A1-206ENST00000491668 CFAP65Q6ZU64 1925 aaKnown RBP19.63■□□□□ 0.73
SEC61A1-206ENST00000491668 UGGT1Q9NYU2 1555 aa19.63■□□□□ 0.73
SEC61A1-206ENST00000491668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.63■□□□□ 0.73
SEC61A1-206ENST00000491668 ZNF335Q9H4Z2 1342 aaPredicted RBP19.63■□□□□ 0.73
SEC61A1-206ENST00000491668 POLR1AO95602 1720 aaPredicted RBP19.61■□□□□ 0.73
SEC61A1-206ENST00000491668 LMTK2Q8IWU2 1503 aa19.6■□□□□ 0.73
SEC61A1-206ENST00000491668 THEMISQ8N1K5 641 aaPredicted RBP19.59■□□□□ 0.73
SEC61A1-206ENST00000491668 ANKRD50Q9ULJ7 1429 aa19.58■□□□□ 0.72
SEC61A1-206ENST00000491668 UBR1Q8IWV7 1749 aa19.56■□□□□ 0.72
SEC61A1-206ENST00000491668 KANK1Q14678 1352 aa19.56■□□□□ 0.72
SEC61A1-206ENST00000491668 MED14O60244 1454 aa19.55■□□□□ 0.72
SEC61A1-206ENST00000491668 ANKLE2Q86XL3 938 aa19.55■□□□□ 0.72
SEC61A1-206ENST00000491668 IQSEC2Q5JU85 1478 aa19.54■□□□□ 0.72
SEC61A1-206ENST00000491668 EFCAB6Q5THR3 1501 aa19.54■□□□□ 0.72
SEC61A1-206ENST00000491668 ROCK1Q13464 1354 aa19.53■□□□□ 0.72
SEC61A1-206ENST00000491668 NPHP4O75161 1426 aaPredicted RBP19.52■□□□□ 0.72
SEC61A1-206ENST00000491668 SYNMO15061 1565 aa19.52■□□□□ 0.71
SEC61A1-206ENST00000491668 PIK3C2BO00750 1634 aa19.51■□□□□ 0.71
SEC61A1-206ENST00000491668 NOS1P29475 1434 aa19.51■□□□□ 0.71
SEC61A1-206ENST00000491668 ARHGAP23Q9P227 1491 aa19.5■□□□□ 0.71
SEC61A1-206ENST00000491668 UNC13BO14795 1591 aa19.49■□□□□ 0.71
SEC61A1-206ENST00000491668 SLIT1O75093 1534 aa19.49■□□□□ 0.71
SEC61A1-206ENST00000491668 IQGAP1P46940 1657 aa19.49■□□□□ 0.71
SEC61A1-206ENST00000491668 LTKP29376 864 aa19.48■□□□□ 0.71
SEC61A1-206ENST00000491668 IDI1Q13907 227 aa19.48■□□□□ 0.71
SEC61A1-206ENST00000491668 ITGAEP38570 1179 aa19.47■□□□□ 0.71
SEC61A1-206ENST00000491668 SCAF11Q99590 1463 aaKnown RBP19.46■□□□□ 0.71
SEC61A1-206ENST00000491668 TET3O43151 1660 aa19.46■□□□□ 0.71
SEC61A1-206ENST00000491668 RRBP1Q9P2E9 1410 aaKnown RBP19.45■□□□□ 0.7
SEC61A1-206ENST00000491668 RPRD2Q5VT52 1461 aaKnown RBP19.44■□□□□ 0.7
SEC61A1-206ENST00000491668 STRCP1A6NGW2 1772 aa19.44■□□□□ 0.7
SEC61A1-206ENST00000491668 TMEM2Q9UHN6 1383 aa19.44■□□□□ 0.7
SEC61A1-206ENST00000491668 KDM5AP29375 1690 aaKnown RBP19.43■□□□□ 0.7
SEC61A1-206ENST00000491668 CPS1P31327 1500 aa19.43■□□□□ 0.7
SEC61A1-206ENST00000491668 TXNDC2Q86VQ3 553 aa19.42■□□□□ 0.7
SEC61A1-206ENST00000491668 GCC2Q8IWJ2 1684 aa19.41■□□□□ 0.7
SEC61A1-206ENST00000491668 IQGAP3Q86VI3 1631 aa19.4■□□□□ 0.7
SEC61A1-206ENST00000491668 ADGRB3O60242 1522 aa19.4■□□□□ 0.7
SEC61A1-206ENST00000491668 E9PCH4 1651 aa19.4■□□□□ 0.7
SEC61A1-206ENST00000491668 UBAP1LF5GYI3 381 aa19.39■□□□□ 0.69
SEC61A1-206ENST00000491668 SLC52A1Q9NWF4 448 aa19.38■□□□□ 0.69
SEC61A1-206ENST00000491668 NUP155O75694 1391 aa19.36■□□□□ 0.69
SEC61A1-206ENST00000491668 STAG3Q9UJ98 1225 aa19.36■□□□□ 0.69
SEC61A1-206ENST00000491668 ALKQ9UM73 1620 aa19.36■□□□□ 0.69
SEC61A1-206ENST00000491668 EID1Q9Y6B2 187 aa19.35■□□□□ 0.69
SEC61A1-206ENST00000491668 LRRC7Q96NW7 1537 aa19.35■□□□□ 0.69
SEC61A1-206ENST00000491668 TMEM131LA2VDJ0 1609 aa19.34■□□□□ 0.69
SEC61A1-206ENST00000491668 MYO5BQ9ULV0 1848 aa19.34■□□□□ 0.69
SEC61A1-206ENST00000491668 ZFYVE9O95405 1425 aa19.33■□□□□ 0.68
SEC61A1-206ENST00000491668 NAIPQ13075 1403 aa19.33■□□□□ 0.68
SEC61A1-206ENST00000491668 SLC26A8Q96RN1 970 aa19.28■□□□□ 0.68
SEC61A1-206ENST00000491668 XIRP1Q702N8 1843 aaKnown RBP19.27■□□□□ 0.68
SEC61A1-206ENST00000491668 RIMS2Q9UQ26 1411 aa19.26■□□□□ 0.67
SEC61A1-206ENST00000491668 TOM1O60784 492 aa19.25■□□□□ 0.67
SEC61A1-206ENST00000491668 PIP4K2BP78356 416 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms