RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 KIF3BO15066 747 aa32.24■■■□□ 2.75
VCPKMT-204ENST00000491402 AGLP35573 1532 aa32.24■■■□□ 2.75
VCPKMT-204ENST00000491402 DEPDC5O75140 1603 aa32.23■■■□□ 2.75
VCPKMT-204ENST00000491402 TRIM52Q96A61 297 aa32.21■■■□□ 2.75
VCPKMT-204ENST00000491402 GGT6Q6P531 493 aa32.19■■■□□ 2.74
VCPKMT-204ENST00000491402 RNF17Q9BXT8 1623 aaKnown RBP32.19■■■□□ 2.74
VCPKMT-204ENST00000491402 KDM5DQ9BY66 1539 aa32.17■■■□□ 2.74
VCPKMT-204ENST00000491402 MROH1Q8NDA8 1641 aa32.16■■■□□ 2.74
VCPKMT-204ENST00000491402 DHX57Q6P158 1386 aaKnown RBP32.15■■■□□ 2.74
VCPKMT-204ENST00000491402 PRDM15P57071 1507 aaPredicted RBP32.15■■■□□ 2.74
VCPKMT-204ENST00000491402 NUP155O75694 1391 aa32.14■■■□□ 2.74
VCPKMT-204ENST00000491402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.12■■■□□ 2.73
VCPKMT-204ENST00000491402 IQGAP3Q86VI3 1631 aa32.11■■■□□ 2.73
VCPKMT-204ENST00000491402 PZPP20742 1482 aa32.11■■■□□ 2.73
VCPKMT-204ENST00000491402 KDM4FA0A1W2PPD8 638 aa32.11■■■□□ 2.73
VCPKMT-204ENST00000491402 FAM135AQ9P2D6 1515 aa32.09■■■□□ 2.73
VCPKMT-204ENST00000491402 VWDEQ8N2E2 1590 aa32.07■■■□□ 2.73
VCPKMT-204ENST00000491402 MPHOSPH9Q99550 1183 aa32.06■■■□□ 2.72
VCPKMT-204ENST00000491402 ADAMTSL3P82987 1691 aa32.06■■■□□ 2.72
VCPKMT-204ENST00000491402 CCER1Q8TC90 406 aaPredicted RBP32.05■■■□□ 2.72
VCPKMT-204ENST00000491402 KANK1Q14678 1352 aa32.04■■■□□ 2.72
VCPKMT-204ENST00000491402 SLC4A1APQ9BWU0 796 aaKnown RBP32.04■■■□□ 2.72
VCPKMT-204ENST00000491402 ESF1Q9H501 851 aaKnown RBP32.03■■■□□ 2.72
VCPKMT-204ENST00000491402 MADDQ8WXG6 1647 aa32.02■■■□□ 2.72
VCPKMT-204ENST00000491402 PPP6R1Q9UPN7 881 aa32■■■□□ 2.71
VCPKMT-204ENST00000491402 CEP152O94986 1710 aa32■■■□□ 2.71
VCPKMT-204ENST00000491402 WASHC2CQ9Y4E1 1318 aa31.99■■■□□ 2.71
VCPKMT-204ENST00000491402 FER1L4A9Z1Z3 1794 aa31.98■■■□□ 2.71
VCPKMT-204ENST00000491402 TET3O43151 1660 aa31.96■■■□□ 2.71
VCPKMT-204ENST00000491402 ZC3H13Q5T200 1668 aaKnown RBP31.96■■■□□ 2.71
VCPKMT-204ENST00000491402 LMTK2Q8IWU2 1503 aa31.96■■■□□ 2.71
VCPKMT-204ENST00000491402 ABCC3O15438 1527 aa31.95■■■□□ 2.71
VCPKMT-204ENST00000491402 RIMS1Q86UR5 1692 aaKnown RBP31.94■■■□□ 2.7
VCPKMT-204ENST00000491402 PKD2Q13563 968 aa31.92■■■□□ 2.7
VCPKMT-204ENST00000491402 CLTCQ00610 1675 aaKnown RBP31.92■■■□□ 2.7
VCPKMT-204ENST00000491402 PLPPR3Q6T4P5 718 aa31.91■■■□□ 2.7
VCPKMT-204ENST00000491402 CNTLNQ9NXG0 1405 aa31.9■■■□□ 2.7
VCPKMT-204ENST00000491402 EFCAB6Q5THR3 1501 aa31.9■■■□□ 2.7
VCPKMT-204ENST00000491402 E9PCH4 1651 aa31.89■■■□□ 2.7
VCPKMT-204ENST00000491402 FOXD1Q16676 465 aa31.89■■■□□ 2.7
VCPKMT-204ENST00000491402 CLSPNQ9HAW4 1339 aa31.89■■■□□ 2.69
VCPKMT-204ENST00000491402 CAMSAP1Q5T5Y3 1602 aa31.88■■■□□ 2.69
VCPKMT-204ENST00000491402 CEBPAP49715 358 aaPredicted RBP31.88■■■□□ 2.69
VCPKMT-204ENST00000491402 PTPRMP28827 1452 aa31.87■■■□□ 2.69
VCPKMT-204ENST00000491402 ZMYM3Q14202 1370 aa31.86■■■□□ 2.69
VCPKMT-204ENST00000491402 ANKRD30BQ9BXX2 1392 aa31.8■■■□□ 2.68
VCPKMT-204ENST00000491402 MROH2AA6NES4 1674 aa31.79■■■□□ 2.68
VCPKMT-204ENST00000491402 NPATQ14207 1427 aa31.79■■■□□ 2.68
VCPKMT-204ENST00000491402 RPRD2Q5VT52 1461 aaKnown RBP31.78■■■□□ 2.68
VCPKMT-204ENST00000491402 C3P01024 1663 aa31.77■■■□□ 2.68
VCPKMT-204ENST00000491402 ARHGAP31Q2M1Z3 1444 aa31.77■■■□□ 2.68
VCPKMT-204ENST00000491402 SPHKAPQ2M3C7 1700 aa31.75■■■□□ 2.67
VCPKMT-204ENST00000491402 FBXO31Q5XUX0 539 aaPredicted RBP31.75■■■□□ 2.67
VCPKMT-204ENST00000491402 CFAP65Q6ZU64 1925 aaKnown RBP31.74■■■□□ 2.67
VCPKMT-204ENST00000491402 PLA2R1Q13018 1463 aa31.72■■■□□ 2.67
VCPKMT-204ENST00000491402 SIN3AQ96ST3 1273 aa31.7■■■□□ 2.67
VCPKMT-204ENST00000491402 PTPRTO14522 1441 aa31.7■■■□□ 2.66
VCPKMT-204ENST00000491402 TRPM2O94759 1503 aa31.69■■■□□ 2.66
VCPKMT-204ENST00000491402 PREX1Q8TCU6 1659 aa31.67■■■□□ 2.66
VCPKMT-204ENST00000491402 AEBP2Q6ZN18 517 aaPredicted RBP31.66■■■□□ 2.66
VCPKMT-204ENST00000491402 CCDC144AA2RUR9 1427 aa31.63■■■□□ 2.65
VCPKMT-204ENST00000491402 NOS1P29475 1434 aa31.63■■■□□ 2.65
VCPKMT-204ENST00000491402 NEUROD1Q13562 356 aa31.63■■■□□ 2.65
VCPKMT-204ENST00000491402 ERVK-7P63135 1459 aa31.6■■■□□ 2.65
VCPKMT-204ENST00000491402 SYNMO15061 1565 aa31.59■■■□□ 2.65
VCPKMT-204ENST00000491402 CLTCL1P53675 1640 aa31.59■■■□□ 2.65
VCPKMT-204ENST00000491402 SPATA31D1Q6ZQQ2 1576 aa31.58■■■□□ 2.65
VCPKMT-204ENST00000491402 SETD1BQ9UPS6 1966 aaKnown RBP31.58■■■□□ 2.65
VCPKMT-204ENST00000491402 UGGT1Q9NYU2 1555 aa31.57■■■□□ 2.64
VCPKMT-204ENST00000491402 TNRQ92752 1358 aa31.57■■■□□ 2.64
VCPKMT-204ENST00000491402 PIK3C2BO00750 1634 aa31.53■■■□□ 2.64
VCPKMT-204ENST00000491402 ZEB1P37275 1124 aaPredicted RBP31.52■■■□□ 2.64
VCPKMT-204ENST00000491402 KIF1BO60333 1816 aa31.48■■■□□ 2.63
VCPKMT-204ENST00000491402 TONSLQ96HA7 1378 aa31.47■■■□□ 2.63
VCPKMT-204ENST00000491402 UHRF1BP1Q6BDS2 1440 aa31.45■■■□□ 2.63
VCPKMT-204ENST00000491402 IDI1Q13907 227 aa31.45■■■□□ 2.62
VCPKMT-204ENST00000491402 SLC52A1Q9NWF4 448 aa31.45■■■□□ 2.62
VCPKMT-204ENST00000491402 TIMELESSQ9UNS1 1208 aa31.43■■■□□ 2.62
VCPKMT-204ENST00000491402 MYO3AQ8NEV4 1616 aa31.43■■■□□ 2.62
VCPKMT-204ENST00000491402 SPATA31E1Q6ZUB1 1445 aa31.42■■■□□ 2.62
VCPKMT-204ENST00000491402 NEURL4Q96JN8 1562 aa31.41■■■□□ 2.62
VCPKMT-204ENST00000491402 NLRP1Q9C000 1473 aa31.41■■■□□ 2.62
VCPKMT-204ENST00000491402 ADGRB3O60242 1522 aa31.39■■■□□ 2.62
VCPKMT-204ENST00000491402 LMTK3Q96Q04 1460 aa31.37■■■□□ 2.61
VCPKMT-204ENST00000491402 A2ML1A8K2U0 1454 aa31.37■■■□□ 2.61
VCPKMT-204ENST00000491402 L3MBTL2Q969R5 705 aa31.36■■■□□ 2.61
VCPKMT-204ENST00000491402 CEP170BQ9Y4F5 1589 aaPredicted RBP31.36■■■□□ 2.61
VCPKMT-204ENST00000491402 HSPA2P54652 639 aa31.35■■■□□ 2.61
VCPKMT-204ENST00000491402 TMEM131LA2VDJ0 1609 aa31.35■■■□□ 2.61
VCPKMT-204ENST00000491402 RGL3Q3MIN7 710 aa31.35■■■□□ 2.61
VCPKMT-204ENST00000491402 STAG3Q9UJ98 1225 aa31.35■■■□□ 2.61
VCPKMT-204ENST00000491402 MYO5BQ9ULV0 1848 aa31.34■■■□□ 2.61
VCPKMT-204ENST00000491402 CHGAP10645 457 aaKnown RBP31.33■■■□□ 2.61
VCPKMT-204ENST00000491402 ZNF142P52746 1687 aaPredicted RBP31.31■■■□□ 2.6
VCPKMT-204ENST00000491402 THEMISQ8N1K5 641 aaPredicted RBP31.29■■■□□ 2.6
VCPKMT-204ENST00000491402 KDM5AP29375 1690 aaKnown RBP31.28■■■□□ 2.6
VCPKMT-204ENST00000491402 UBR1Q8IWV7 1749 aa31.26■■■□□ 2.59
VCPKMT-204ENST00000491402 IFT172Q9UG01 1749 aa31.26■■■□□ 2.59
VCPKMT-204ENST00000491402 PPP1R15AO75807 674 aaPredicted RBP31.25■■■□□ 2.59
VCPKMT-204ENST00000491402 DCAF11Q8TEB1 546 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms