RNA–Protein interactions for RNA: ENST00000491274.5

SDHB-208, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-208ENST00000491274 MIA2Q96PC5 1412 aa10.22□□□□□ -0.77
SDHB-208ENST00000491274 KIF3BO15066 747 aa10.21□□□□□ -0.77
SDHB-208ENST00000491274 ABCB7O75027 752 aa10.21□□□□□ -0.77
SDHB-208ENST00000491274 BCANQ96GW7 911 aa10.21□□□□□ -0.77
SDHB-208ENST00000491274 CAMSAP2Q08AD1 1489 aa10.21□□□□□ -0.78
SDHB-208ENST00000491274 MBD5Q9P267 1494 aa10.21□□□□□ -0.78
SDHB-208ENST00000491274 PTPRMP28827 1452 aa10.2□□□□□ -0.78
SDHB-208ENST00000491274 KDM5CP41229 1560 aa10.2□□□□□ -0.78
SDHB-208ENST00000491274 CDC42BPAQ5VT25 1732 aa10.2□□□□□ -0.78
SDHB-208ENST00000491274 CHIC2Q9UKJ5 165 aa10.2□□□□□ -0.78
SDHB-208ENST00000491274 HECW2Q9P2P5 1572 aa10.19□□□□□ -0.78
SDHB-208ENST00000491274 CCDC141Q6ZP82 1450 aa10.19□□□□□ -0.78
SDHB-208ENST00000491274 RTEL1-TNFRSF6BF6WH68 1400 aa10.19□□□□□ -0.78
SDHB-208ENST00000491274 POLA2Q14181 598 aa10.19□□□□□ -0.78
SDHB-208ENST00000491274 RRP7BPQ9NSQ0 103 aa10.19□□□□□ -0.78
SDHB-208ENST00000491274 A2MP01023 1474 aa10.18□□□□□ -0.78
SDHB-208ENST00000491274 DHX29Q7Z478 1369 aaKnown RBP10.18□□□□□ -0.78
SDHB-208ENST00000491274 VSIG10Q8N0Z9 540 aa10.18□□□□□ -0.78
SDHB-208ENST00000491274 TAOK2Q9UL54 1235 aa10.17□□□□□ -0.78
SDHB-208ENST00000491274 ITSN2Q9NZM3 1697 aa10.17□□□□□ -0.78
SDHB-208ENST00000491274 ATP7AQ04656 1500 aa10.17□□□□□ -0.78
SDHB-208ENST00000491274 WASHC2CQ9Y4E1 1318 aa10.16□□□□□ -0.78
SDHB-208ENST00000491274 ITGAEP38570 1179 aa10.16□□□□□ -0.78
SDHB-208ENST00000491274 KDM2AQ9Y2K7 1162 aa10.16□□□□□ -0.78
SDHB-208ENST00000491274 DIP2CQ9Y2E4 1556 aa10.16□□□□□ -0.78
SDHB-208ENST00000491274 FGD6Q6ZV73 1430 aa10.16□□□□□ -0.78
SDHB-208ENST00000491274 AGLP35573 1532 aa10.14□□□□□ -0.79
SDHB-208ENST00000491274 BCORL1Q5H9F3 1711 aa10.14□□□□□ -0.79
SDHB-208ENST00000491274 ZMYM3Q14202 1370 aa10.14□□□□□ -0.79
SDHB-208ENST00000491274 ADAMTSL3P82987 1691 aa10.13□□□□□ -0.79
SDHB-208ENST00000491274 HSPA2P54652 639 aa10.13□□□□□ -0.79
SDHB-208ENST00000491274 ABCA6Q8N139 1617 aa10.13□□□□□ -0.79
SDHB-208ENST00000491274 MADDQ8WXG6 1647 aa10.13□□□□□ -0.79
SDHB-208ENST00000491274 ABCC5O15440 1437 aa10.13□□□□□ -0.79
SDHB-208ENST00000491274 CNTLNQ9NXG0 1405 aa10.13□□□□□ -0.79
SDHB-208ENST00000491274 ANKRD30AQ9BXX3 1397 aa10.13□□□□□ -0.79
SDHB-208ENST00000491274 KIDINS220Q9ULH0 1771 aa10.12□□□□□ -0.79
SDHB-208ENST00000491274 REREQ9P2R6 1566 aa10.12□□□□□ -0.79
SDHB-208ENST00000491274 KIF15Q9NS87 1388 aa10.12□□□□□ -0.79
SDHB-208ENST00000491274 ARHGEF5Q12774 1597 aa10.1□□□□□ -0.79
SDHB-208ENST00000491274 DAPK1P53355 1430 aa10.1□□□□□ -0.79
SDHB-208ENST00000491274 PTPN23Q9H3S7 1636 aa10.09□□□□□ -0.79
SDHB-208ENST00000491274 TCOF1Q13428 1488 aaKnown RBP10.09□□□□□ -0.79
SDHB-208ENST00000491274 INO80Q9ULG1 1556 aaPredicted RBP10.09□□□□□ -0.79
SDHB-208ENST00000491274 RIMS1Q86UR5 1692 aaKnown RBP10.09□□□□□ -0.79
SDHB-208ENST00000491274 FBXO31Q5XUX0 539 aaPredicted RBP10.08□□□□□ -0.8
SDHB-208ENST00000491274 SIGLEC1Q9BZZ2 1709 aa10.07□□□□□ -0.8
SDHB-208ENST00000491274 KANK1Q14678 1352 aa10.07□□□□□ -0.8
SDHB-208ENST00000491274 PAXIP1Q6ZW49 1069 aaPredicted RBP10.07□□□□□ -0.8
SDHB-208ENST00000491274 BBXQ8WY36 941 aaPredicted RBP10.07□□□□□ -0.8
SDHB-208ENST00000491274 UHRF1BP1Q6BDS2 1440 aa10.07□□□□□ -0.8
SDHB-208ENST00000491274 ECM2O94769 699 aaPredicted RBP10.06□□□□□ -0.8
SDHB-208ENST00000491274 NCOA1Q15788 1441 aa10.06□□□□□ -0.8
SDHB-208ENST00000491274 SHANK2Q9UPX8 1470 aa10.05□□□□□ -0.8
SDHB-208ENST00000491274 SPOCK2Q92563 424 aa10.05□□□□□ -0.8
SDHB-208ENST00000491274 CFAP44Q96MT7 982 aa10.05□□□□□ -0.8
SDHB-208ENST00000491274 PLXNC1O60486 1568 aa10.05□□□□□ -0.8
SDHB-208ENST00000491274 DUOX2Q9NRD8 1548 aa10.04□□□□□ -0.8
SDHB-208ENST00000491274 TPRNQ4KMQ1 711 aa10.04□□□□□ -0.8
SDHB-208ENST00000491274 KLHL34Q8N239 644 aa10.04□□□□□ -0.8
SDHB-208ENST00000491274 LMTK3Q96Q04 1460 aa10.04□□□□□ -0.8
SDHB-208ENST00000491274 FER1L4A9Z1Z3 1794 aa10.03□□□□□ -0.8
SDHB-208ENST00000491274 ADGBQ8N7X0 1667 aa10.03□□□□□ -0.8
SDHB-208ENST00000491274 NPATQ14207 1427 aa10.03□□□□□ -0.8
SDHB-208ENST00000491274 ERBINQ96RT1 1412 aa10.03□□□□□ -0.8
SDHB-208ENST00000491274 MAST1Q9Y2H9 1570 aa10.03□□□□□ -0.8
SDHB-208ENST00000491274 TNRQ92752 1358 aa10.02□□□□□ -0.8
SDHB-208ENST00000491274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.02□□□□□ -0.84e-7■■■■■ 35.6
SDHB-208ENST00000491274 PTPRKQ15262 1439 aa10.02□□□□□ -0.81
SDHB-208ENST00000491274 ANKRD50Q9ULJ7 1429 aa10.02□□□□□ -0.81
SDHB-208ENST00000491274 RGL2O15211 777 aa10.02□□□□□ -0.81
SDHB-208ENST00000491274 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.02□□□□□ -0.81
SDHB-208ENST00000491274 THEMISQ8N1K5 641 aaPredicted RBP10.01□□□□□ -0.81
SDHB-208ENST00000491274 STAG3Q9UJ98 1225 aa10.01□□□□□ -0.81
SDHB-208ENST00000491274 ROCK1Q13464 1354 aa10.01□□□□□ -0.81
SDHB-208ENST00000491274 DNMT1P26358 1616 aaKnown RBP10□□□□□ -0.81
SDHB-208ENST00000491274 NCKAP5LQ9HCH0 1330 aa10□□□□□ -0.81
SDHB-208ENST00000491274 KDM5DQ9BY66 1539 aa9.99□□□□□ -0.81
SDHB-208ENST00000491274 ADGRL2O95490 1459 aa9.98□□□□□ -0.81
SDHB-208ENST00000491274 ANKLE2Q86XL3 938 aa9.98□□□□□ -0.81
SDHB-208ENST00000491274 TRIM52Q96A61 297 aa9.98□□□□□ -0.81
SDHB-208ENST00000491274 TSHZ2Q9NRE2 1034 aa9.98□□□□□ -0.81
SDHB-208ENST00000491274 RRBP1Q9P2E9 1410 aaKnown RBP9.98□□□□□ -0.81
SDHB-208ENST00000491274 PZPP20742 1482 aa9.98□□□□□ -0.81
SDHB-208ENST00000491274 CLTCQ00610 1675 aaKnown RBP9.97□□□□□ -0.81
SDHB-208ENST00000491274 NUP155O75694 1391 aa9.97□□□□□ -0.81
SDHB-208ENST00000491274 ABCC3O15438 1527 aa9.96□□□□□ -0.82
SDHB-208ENST00000491274 FAM135AQ9P2D6 1515 aa9.96□□□□□ -0.82
SDHB-208ENST00000491274 C3P01024 1663 aa9.96□□□□□ -0.82
SDHB-208ENST00000491274 CHGAP10645 457 aaKnown RBP9.95□□□□□ -0.82
SDHB-208ENST00000491274 RBM42Q9BTD8 480 aaKnown RBP9.95□□□□□ -0.82
SDHB-208ENST00000491274 IDI1Q13907 227 aa9.94□□□□□ -0.82
SDHB-208ENST00000491274 SLC52A1Q9NWF4 448 aa9.94□□□□□ -0.82
SDHB-208ENST00000491274 EID1Q9Y6B2 187 aa9.94□□□□□ -0.82
SDHB-208ENST00000491274 SETD1BQ9UPS6 1966 aaKnown RBP9.94□□□□□ -0.82
SDHB-208ENST00000491274 MROH2AA6NES4 1674 aa9.93□□□□□ -0.82
SDHB-208ENST00000491274 EIF2AK4Q9P2K8 1649 aaKnown RBP9.93□□□□□ -0.82
SDHB-208ENST00000491274 A2ML1A8K2U0 1454 aa9.93□□□□□ -0.82
SDHB-208ENST00000491274 ARHGAP31Q2M1Z3 1444 aa9.93□□□□□ -0.82
SDHB-208ENST00000491274 POTEHQ6S545 545 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms