RNA–Protein interactions for RNA: ENST00000491215.1

NOTCH4-205, Transcript of notch 4, humanhuman

TSL 3

Gene NOTCH4, Length 1,632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-205ENST00000491215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.49■■■□□ 2.79
NOTCH4-205ENST00000491215 PCGF6Q9BYE7 350 aa32.48■■■□□ 2.79
NOTCH4-205ENST00000491215 MROH1Q8NDA8 1641 aa32.47■■■□□ 2.79
NOTCH4-205ENST00000491215 PRDM15P57071 1507 aaPredicted RBP32.46■■■□□ 2.79
NOTCH4-205ENST00000491215 FER1L4A9Z1Z3 1794 aa32.45■■■□□ 2.78
NOTCH4-205ENST00000491215 UNC13BO14795 1591 aa32.44■■■□□ 2.78
NOTCH4-205ENST00000491215 ESF1Q9H501 851 aaKnown RBP32.44■■■□□ 2.78
NOTCH4-205ENST00000491215 ADAMTSL3P82987 1691 aa32.44■■■□□ 2.78
NOTCH4-205ENST00000491215 RAB3GAP2Q9H2M9 1393 aa32.44■■■□□ 2.78
NOTCH4-205ENST00000491215 KANK1Q14678 1352 aa32.43■■■□□ 2.78
NOTCH4-205ENST00000491215 MADDQ8WXG6 1647 aa32.42■■■□□ 2.78
NOTCH4-205ENST00000491215 WASHC2CQ9Y4E1 1318 aa32.4■■■□□ 2.78
NOTCH4-205ENST00000491215 PPP6R1Q9UPN7 881 aa32.4■■■□□ 2.78
NOTCH4-205ENST00000491215 KDM5DQ9BY66 1539 aa32.4■■■□□ 2.78
NOTCH4-205ENST00000491215 CLTCQ00610 1675 aaKnown RBP32.38■■■□□ 2.77
NOTCH4-205ENST00000491215 TRIM52Q96A61 297 aa32.38■■■□□ 2.77
NOTCH4-205ENST00000491215 NUP155O75694 1391 aa32.38■■■□□ 2.77
NOTCH4-205ENST00000491215 FAM135AQ9P2D6 1515 aa32.37■■■□□ 2.77
NOTCH4-205ENST00000491215 CEP152O94986 1710 aa32.37■■■□□ 2.77
NOTCH4-205ENST00000491215 ZC3H13Q5T200 1668 aaKnown RBP32.36■■■□□ 2.77
NOTCH4-205ENST00000491215 RIMS1Q86UR5 1692 aaKnown RBP32.36■■■□□ 2.77
NOTCH4-205ENST00000491215 ABCC3O15438 1527 aa32.35■■■□□ 2.77
NOTCH4-205ENST00000491215 CNTLNQ9NXG0 1405 aa32.34■■■□□ 2.77
NOTCH4-205ENST00000491215 VWDEQ8N2E2 1590 aa32.34■■■□□ 2.77
NOTCH4-205ENST00000491215 KDM4FA0A1W2PPD8 638 aa32.33■■■□□ 2.77
NOTCH4-205ENST00000491215 IQGAP3Q86VI3 1631 aa32.31■■■□□ 2.76
NOTCH4-205ENST00000491215 ACIN1Q9UKV3 1341 aaKnown RBP32.29■■■□□ 2.76
NOTCH4-205ENST00000491215 MROH2AA6NES4 1674 aa32.28■■■□□ 2.76
NOTCH4-205ENST00000491215 CAMSAP1Q5T5Y3 1602 aa32.28■■■□□ 2.76
NOTCH4-205ENST00000491215 HRCP23327 699 aa32.26■■■□□ 2.76
NOTCH4-205ENST00000491215 LMTK2Q8IWU2 1503 aa32.26■■■□□ 2.76
NOTCH4-205ENST00000491215 PLPPR3Q6T4P5 718 aa32.24■■■□□ 2.75
NOTCH4-205ENST00000491215 TET3O43151 1660 aa32.24■■■□□ 2.75
NOTCH4-205ENST00000491215 ZMYM3Q14202 1370 aa32.24■■■□□ 2.75
NOTCH4-205ENST00000491215 PTPRMP28827 1452 aa32.22■■■□□ 2.75
NOTCH4-205ENST00000491215 EFCAB6Q5THR3 1501 aa32.22■■■□□ 2.75
NOTCH4-205ENST00000491215 C3P01024 1663 aa32.21■■■□□ 2.75
NOTCH4-205ENST00000491215 PZPP20742 1482 aa32.2■■■□□ 2.75
NOTCH4-205ENST00000491215 SLC4A1APQ9BWU0 796 aaKnown RBP32.2■■■□□ 2.75
NOTCH4-205ENST00000491215 CEBPAP49715 358 aaPredicted RBP32.18■■■□□ 2.74
NOTCH4-205ENST00000491215 NPATQ14207 1427 aa32.15■■■□□ 2.74
NOTCH4-205ENST00000491215 ARHGAP31Q2M1Z3 1444 aa32.15■■■□□ 2.74
NOTCH4-205ENST00000491215 MPHOSPH9Q99550 1183 aa32.14■■■□□ 2.74
NOTCH4-205ENST00000491215 E9PCH4 1651 aa32.14■■■□□ 2.74
NOTCH4-205ENST00000491215 CFAP65Q6ZU64 1925 aaKnown RBP32.12■■■□□ 2.73
NOTCH4-205ENST00000491215 PKD2Q13563 968 aa32.11■■■□□ 2.73
NOTCH4-205ENST00000491215 RPRD2Q5VT52 1461 aaKnown RBP32.1■■■□□ 2.73
NOTCH4-205ENST00000491215 FBXO31Q5XUX0 539 aaPredicted RBP32.08■■■□□ 2.73
NOTCH4-205ENST00000491215 PREX1Q8TCU6 1659 aa32.07■■■□□ 2.72
NOTCH4-205ENST00000491215 ERVK-7P63135 1459 aa32.05■■■□□ 2.72
NOTCH4-205ENST00000491215 FOXD1Q16676 465 aa32.03■■■□□ 2.72
NOTCH4-205ENST00000491215 SPATA31D1Q6ZQQ2 1576 aa32.02■■■□□ 2.72
NOTCH4-205ENST00000491215 SPHKAPQ2M3C7 1700 aa31.98■■■□□ 2.71
NOTCH4-205ENST00000491215 TNRQ92752 1358 aa31.98■■■□□ 2.71
NOTCH4-205ENST00000491215 NOS1P29475 1434 aa31.97■■■□□ 2.71
NOTCH4-205ENST00000491215 SYNMO15061 1565 aa31.94■■■□□ 2.7
NOTCH4-205ENST00000491215 DHX57Q6P158 1386 aaKnown RBP31.93■■■□□ 2.7
NOTCH4-205ENST00000491215 SETD1BQ9UPS6 1966 aaKnown RBP31.92■■■□□ 2.7
NOTCH4-205ENST00000491215 PTPRTO14522 1441 aa31.91■■■□□ 2.7
NOTCH4-205ENST00000491215 MYO3AQ8NEV4 1616 aa31.91■■■□□ 2.7
NOTCH4-205ENST00000491215 TRPM2O94759 1503 aa31.9■■■□□ 2.7
NOTCH4-205ENST00000491215 PLA2R1Q13018 1463 aa31.88■■■□□ 2.69
NOTCH4-205ENST00000491215 UGGT1Q9NYU2 1555 aa31.87■■■□□ 2.69
NOTCH4-205ENST00000491215 AEBP2Q6ZN18 517 aaPredicted RBP31.87■■■□□ 2.69
NOTCH4-205ENST00000491215 UHRF1BP1Q6BDS2 1440 aa31.86■■■□□ 2.69
NOTCH4-205ENST00000491215 NLRP1Q9C000 1473 aa31.85■■■□□ 2.69
NOTCH4-205ENST00000491215 SLC52A1Q9NWF4 448 aa31.85■■■□□ 2.69
NOTCH4-205ENST00000491215 PIK3C2BO00750 1634 aa31.83■■■□□ 2.69
NOTCH4-205ENST00000491215 IDI1Q13907 227 aa31.82■■■□□ 2.68
NOTCH4-205ENST00000491215 ANKRD30BQ9BXX2 1392 aa31.82■■■□□ 2.68
NOTCH4-205ENST00000491215 CCDC144AA2RUR9 1427 aa31.82■■■□□ 2.68
NOTCH4-205ENST00000491215 CLTCL1P53675 1640 aa31.81■■■□□ 2.68
NOTCH4-205ENST00000491215 CEP170BQ9Y4F5 1589 aaPredicted RBP31.81■■■□□ 2.68
NOTCH4-205ENST00000491215 ZNF142P52746 1687 aaPredicted RBP31.79■■■□□ 2.68
NOTCH4-205ENST00000491215 A2ML1A8K2U0 1454 aa31.78■■■□□ 2.68
NOTCH4-205ENST00000491215 STAG3Q9UJ98 1225 aa31.77■■■□□ 2.68
NOTCH4-205ENST00000491215 CHGAP10645 457 aaKnown RBP31.75■■■□□ 2.67
NOTCH4-205ENST00000491215 LMTK3Q96Q04 1460 aa31.73■■■□□ 2.67
NOTCH4-205ENST00000491215 ADGRB3O60242 1522 aa31.72■■■□□ 2.67
NOTCH4-205ENST00000491215 UBR1Q8IWV7 1749 aa31.72■■■□□ 2.67
NOTCH4-205ENST00000491215 KIF1BO60333 1816 aa31.72■■■□□ 2.67
NOTCH4-205ENST00000491215 CCER1Q8TC90 406 aaPredicted RBP31.71■■■□□ 2.67
NOTCH4-205ENST00000491215 TMEM131LA2VDJ0 1609 aa31.69■■■□□ 2.66
NOTCH4-205ENST00000491215 KDM5AP29375 1690 aaKnown RBP31.69■■■□□ 2.66
NOTCH4-205ENST00000491215 MYO5BQ9ULV0 1848 aa31.68■■■□□ 2.66
NOTCH4-205ENST00000491215 THEMISQ8N1K5 641 aaPredicted RBP31.65■■■□□ 2.66
NOTCH4-205ENST00000491215 HSPA2P54652 639 aa31.62■■■□□ 2.65
NOTCH4-205ENST00000491215 SIN3AQ96ST3 1273 aa31.62■■■□□ 2.65
NOTCH4-205ENST00000491215 ZNF326Q5BKZ1 582 aaKnown RBP31.61■■■□□ 2.65
NOTCH4-205ENST00000491215 NEUROD1Q13562 356 aa31.6■■■□□ 2.65
NOTCH4-205ENST00000491215 RGL3Q3MIN7 710 aa31.58■■■□□ 2.65
NOTCH4-205ENST00000491215 SPATA31E1Q6ZUB1 1445 aa31.58■■■□□ 2.65
NOTCH4-205ENST00000491215 CLSPNQ9HAW4 1339 aa31.57■■■□□ 2.65
NOTCH4-205ENST00000491215 TMEM2Q9UHN6 1383 aa31.55■■■□□ 2.64
NOTCH4-205ENST00000491215 NEURL4Q96JN8 1562 aa31.54■■■□□ 2.64
NOTCH4-205ENST00000491215 SLIT1O75093 1534 aa31.53■■■□□ 2.64
NOTCH4-205ENST00000491215 ARHGAP23Q9P227 1491 aa31.51■■■□□ 2.63
NOTCH4-205ENST00000491215 RIMS2Q9UQ26 1411 aa31.51■■■□□ 2.63
NOTCH4-205ENST00000491215 EID1Q9Y6B2 187 aa31.49■■■□□ 2.63
NOTCH4-205ENST00000491215 ZFYVE9O95405 1425 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms