RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 RAB3GAP2Q9H2M9 1393 aa27.35■■□□□ 1.97
PRDM2-209ENST00000491134 VWDEQ8N2E2 1590 aa27.35■■□□□ 1.97
PRDM2-209ENST00000491134 ADAMTSL3P82987 1691 aa27.34■■□□□ 1.97
PRDM2-209ENST00000491134 PCGF6Q9BYE7 350 aa27.34■■□□□ 1.97
PRDM2-209ENST00000491134 ARID4BQ4LE39 1312 aaPredicted RBP27.34■■□□□ 1.97
PRDM2-209ENST00000491134 KDM5DQ9BY66 1539 aa27.31■■□□□ 1.96
PRDM2-209ENST00000491134 HRCP23327 699 aa27.31■■□□□ 1.96
PRDM2-209ENST00000491134 GGT6Q6P531 493 aa27.3■■□□□ 1.96
PRDM2-209ENST00000491134 FAM135AQ9P2D6 1515 aa27.3■■□□□ 1.96
PRDM2-209ENST00000491134 PPP6R1Q9UPN7 881 aa27.29■■□□□ 1.96
PRDM2-209ENST00000491134 IQGAP3Q86VI3 1631 aa27.27■■□□□ 1.96
PRDM2-209ENST00000491134 MLECQ14165 292 aa27.27■■□□□ 1.96
PRDM2-209ENST00000491134 FER1L4A9Z1Z3 1794 aa27.26■■□□□ 1.95
PRDM2-209ENST00000491134 ABCC3O15438 1527 aa27.26■■□□□ 1.95
PRDM2-209ENST00000491134 CEP152O94986 1710 aa27.25■■□□□ 1.95
PRDM2-209ENST00000491134 ZC3H13Q5T200 1668 aaKnown RBP27.25■■□□□ 1.95
PRDM2-209ENST00000491134 LMTK2Q8IWU2 1503 aa27.25■■□□□ 1.95
PRDM2-209ENST00000491134 MADDQ8WXG6 1647 aa27.24■■□□□ 1.95
PRDM2-209ENST00000491134 CLTCQ00610 1675 aaKnown RBP27.23■■□□□ 1.95
PRDM2-209ENST00000491134 NUP155O75694 1391 aa27.22■■□□□ 1.95
PRDM2-209ENST00000491134 PZPP20742 1482 aa27.21■■□□□ 1.95
PRDM2-209ENST00000491134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.21■■□□□ 1.95
PRDM2-209ENST00000491134 MROH2AA6NES4 1674 aa27.21■■□□□ 1.95
PRDM2-209ENST00000491134 ACIN1Q9UKV3 1341 aaKnown RBP27.2■■□□□ 1.95
PRDM2-209ENST00000491134 KANK1Q14678 1352 aa27.19■■□□□ 1.94
PRDM2-209ENST00000491134 TET3O43151 1660 aa27.18■■□□□ 1.94
PRDM2-209ENST00000491134 CNTLNQ9NXG0 1405 aa27.17■■□□□ 1.94
PRDM2-209ENST00000491134 CAMSAP1Q5T5Y3 1602 aa27.17■■□□□ 1.94
PRDM2-209ENST00000491134 RIMS1Q86UR5 1692 aaKnown RBP27.17■■□□□ 1.94
PRDM2-209ENST00000491134 WASHC2CQ9Y4E1 1318 aa27.16■■□□□ 1.94
PRDM2-209ENST00000491134 KDM4FA0A1W2PPD8 638 aa27.16■■□□□ 1.94
PRDM2-209ENST00000491134 EFCAB6Q5THR3 1501 aa27.15■■□□□ 1.94
PRDM2-209ENST00000491134 TRIM52Q96A61 297 aa27.13■■□□□ 1.93
PRDM2-209ENST00000491134 ARHGAP31Q2M1Z3 1444 aa27.13■■□□□ 1.93
PRDM2-209ENST00000491134 E9PCH4 1651 aa27.11■■□□□ 1.93
PRDM2-209ENST00000491134 C3P01024 1663 aa27.11■■□□□ 1.93
PRDM2-209ENST00000491134 ZMYM3Q14202 1370 aa27.1■■□□□ 1.93
PRDM2-209ENST00000491134 NPATQ14207 1427 aa27.08■■□□□ 1.93
PRDM2-209ENST00000491134 MPHOSPH9Q99550 1183 aa27.07■■□□□ 1.92
PRDM2-209ENST00000491134 PTPRMP28827 1452 aa27.06■■□□□ 1.92
PRDM2-209ENST00000491134 ESF1Q9H501 851 aaKnown RBP27.06■■□□□ 1.92
PRDM2-209ENST00000491134 CFAP65Q6ZU64 1925 aaKnown RBP27.06■■□□□ 1.92
PRDM2-209ENST00000491134 RPRD2Q5VT52 1461 aaKnown RBP27.05■■□□□ 1.92
PRDM2-209ENST00000491134 SLC4A1APQ9BWU0 796 aaKnown RBP27.04■■□□□ 1.92
PRDM2-209ENST00000491134 PREX1Q8TCU6 1659 aa27.01■■□□□ 1.92
PRDM2-209ENST00000491134 PKD2Q13563 968 aa27.01■■□□□ 1.91
PRDM2-209ENST00000491134 SPATA31D1Q6ZQQ2 1576 aa27■■□□□ 1.91
PRDM2-209ENST00000491134 DHX57Q6P158 1386 aaKnown RBP26.99■■□□□ 1.91
PRDM2-209ENST00000491134 CEBPAP49715 358 aaPredicted RBP26.99■■□□□ 1.91
PRDM2-209ENST00000491134 NOS1P29475 1434 aa26.99■■□□□ 1.91
PRDM2-209ENST00000491134 ERVK-7P63135 1459 aa26.98■■□□□ 1.91
PRDM2-209ENST00000491134 PTPRTO14522 1441 aa26.98■■□□□ 1.91
PRDM2-209ENST00000491134 FBXO31Q5XUX0 539 aaPredicted RBP26.97■■□□□ 1.91
PRDM2-209ENST00000491134 SPHKAPQ2M3C7 1700 aa26.96■■□□□ 1.91
PRDM2-209ENST00000491134 PLA2R1Q13018 1463 aa26.96■■□□□ 1.91
PRDM2-209ENST00000491134 SYNMO15061 1565 aa26.95■■□□□ 1.9
PRDM2-209ENST00000491134 SETD1BQ9UPS6 1966 aaKnown RBP26.94■■□□□ 1.9
PRDM2-209ENST00000491134 FOXD1Q16676 465 aa26.93■■□□□ 1.9
PRDM2-209ENST00000491134 TRPM2O94759 1503 aa26.9■■□□□ 1.9
PRDM2-209ENST00000491134 PIK3C2BO00750 1634 aa26.89■■□□□ 1.9
PRDM2-209ENST00000491134 ANKRD30BQ9BXX2 1392 aa26.88■■□□□ 1.89
PRDM2-209ENST00000491134 TNRQ92752 1358 aa26.86■■□□□ 1.89
PRDM2-209ENST00000491134 UGGT1Q9NYU2 1555 aa26.84■■□□□ 1.89
PRDM2-209ENST00000491134 CLTCL1P53675 1640 aa26.83■■□□□ 1.88
PRDM2-209ENST00000491134 MYO3AQ8NEV4 1616 aa26.83■■□□□ 1.88
PRDM2-209ENST00000491134 PLPPR3Q6T4P5 718 aa26.82■■□□□ 1.88
PRDM2-209ENST00000491134 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
PRDM2-209ENST00000491134 NLRP1Q9C000 1473 aa26.8■■□□□ 1.88
PRDM2-209ENST00000491134 ZNF142P52746 1687 aaPredicted RBP26.79■■□□□ 1.88
PRDM2-209ENST00000491134 SLC52A1Q9NWF4 448 aa26.78■■□□□ 1.88
PRDM2-209ENST00000491134 IDI1Q13907 227 aa26.77■■□□□ 1.88
PRDM2-209ENST00000491134 KDM5AP29375 1690 aaKnown RBP26.76■■□□□ 1.87
PRDM2-209ENST00000491134 CEP170BQ9Y4F5 1589 aaPredicted RBP26.74■■□□□ 1.87
PRDM2-209ENST00000491134 A2ML1A8K2U0 1454 aa26.74■■□□□ 1.87
PRDM2-209ENST00000491134 UBR1Q8IWV7 1749 aa26.73■■□□□ 1.87
PRDM2-209ENST00000491134 TMEM131LA2VDJ0 1609 aa26.73■■□□□ 1.87
PRDM2-209ENST00000491134 CCDC144AA2RUR9 1427 aa26.73■■□□□ 1.87
PRDM2-209ENST00000491134 MYO5BQ9ULV0 1848 aa26.72■■□□□ 1.87
PRDM2-209ENST00000491134 KIF1BO60333 1816 aa26.72■■□□□ 1.87
PRDM2-209ENST00000491134 ADGRB3O60242 1522 aa26.7■■□□□ 1.87
PRDM2-209ENST00000491134 UHRF1BP1Q6BDS2 1440 aa26.7■■□□□ 1.86
PRDM2-209ENST00000491134 CLSPNQ9HAW4 1339 aa26.69■■□□□ 1.86
PRDM2-209ENST00000491134 NEURL4Q96JN8 1562 aa26.69■■□□□ 1.86
PRDM2-209ENST00000491134 SPATA31E1Q6ZUB1 1445 aa26.68■■□□□ 1.86
PRDM2-209ENST00000491134 LMTK3Q96Q04 1460 aa26.67■■□□□ 1.86
PRDM2-209ENST00000491134 SIN3AQ96ST3 1273 aa26.64■■□□□ 1.86
PRDM2-209ENST00000491134 CCER1Q8TC90 406 aaPredicted RBP26.63■■□□□ 1.85
PRDM2-209ENST00000491134 ARHGAP23Q9P227 1491 aa26.59■■□□□ 1.85
PRDM2-209ENST00000491134 SLIT1O75093 1534 aa26.59■■□□□ 1.85
PRDM2-209ENST00000491134 IFT172Q9UG01 1749 aa26.57■■□□□ 1.84
PRDM2-209ENST00000491134 ZFYVE9O95405 1425 aa26.56■■□□□ 1.84
PRDM2-209ENST00000491134 THEMISQ8N1K5 641 aaPredicted RBP26.55■■□□□ 1.84
PRDM2-209ENST00000491134 TMEM2Q9UHN6 1383 aa26.55■■□□□ 1.84
PRDM2-209ENST00000491134 NEXMIFQ5QGS0 1516 aa26.55■■□□□ 1.84
PRDM2-209ENST00000491134 PPLO60437 1756 aa26.54■■□□□ 1.84
PRDM2-209ENST00000491134 CHGAP10645 457 aaKnown RBP26.54■■□□□ 1.84
PRDM2-209ENST00000491134 STAG3Q9UJ98 1225 aa26.53■■□□□ 1.84
PRDM2-209ENST00000491134 NEUROD1Q13562 356 aa26.51■■□□□ 1.83
PRDM2-209ENST00000491134 RIMS2Q9UQ26 1411 aa26.49■■□□□ 1.83
PRDM2-209ENST00000491134 RPGRIP1LQ68CZ1 1315 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms