RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 POLR1AO95602 1720 aaPredicted RBP24.9■■□□□ 1.58
SCAMP3-208ENST00000490999 HSPA1LP34931 641 aa24.9■■□□□ 1.58
SCAMP3-208ENST00000490999 TNRQ92752 1358 aa24.9■■□□□ 1.58
SCAMP3-208ENST00000490999 FBXO31Q5XUX0 539 aaPredicted RBP24.89■■□□□ 1.58
SCAMP3-208ENST00000490999 KDM5DQ9BY66 1539 aa24.88■■□□□ 1.57
SCAMP3-208ENST00000490999 PZPP20742 1482 aa24.86■■□□□ 1.57
SCAMP3-208ENST00000490999 DHX29Q7Z478 1369 aaKnown RBP24.86■■□□□ 1.57
SCAMP3-208ENST00000490999 CPS1P31327 1500 aa24.86■■□□□ 1.57
SCAMP3-208ENST00000490999 SHANK2Q9UPX8 1470 aa24.85■■□□□ 1.57
SCAMP3-208ENST00000490999 RTEL1-TNFRSF6BF6WH68 1400 aa24.85■■□□□ 1.57
SCAMP3-208ENST00000490999 KIF3BO15066 747 aa24.83■■□□□ 1.57
SCAMP3-208ENST00000490999 CCDC141Q6ZP82 1450 aa24.83■■□□□ 1.56
SCAMP3-208ENST00000490999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.82■■□□□ 1.56
SCAMP3-208ENST00000490999 CEP162Q5TB80 1403 aa24.82■■□□□ 1.56
SCAMP3-208ENST00000490999 VWDEQ8N2E2 1590 aa24.82■■□□□ 1.56
SCAMP3-208ENST00000490999 CAMSAP2Q08AD1 1489 aa24.81■■□□□ 1.56
SCAMP3-208ENST00000490999 ALKQ9UM73 1620 aa24.78■■□□□ 1.56
SCAMP3-208ENST00000490999 FAM135AQ9P2D6 1515 aa24.77■■□□□ 1.56
SCAMP3-208ENST00000490999 TOM1O60784 492 aa24.77■■□□□ 1.56
SCAMP3-208ENST00000490999 WASHC2CQ9Y4E1 1318 aa24.76■■□□□ 1.55
SCAMP3-208ENST00000490999 UGGT1Q9NYU2 1555 aa24.76■■□□□ 1.55
SCAMP3-208ENST00000490999 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
SCAMP3-208ENST00000490999 NPHP4O75161 1426 aaPredicted RBP24.75■■□□□ 1.55
SCAMP3-208ENST00000490999 NCOA2Q15596 1464 aa24.75■■□□□ 1.55
SCAMP3-208ENST00000490999 NLRP1Q9C000 1473 aa24.73■■□□□ 1.55
SCAMP3-208ENST00000490999 MIA2Q96PC5 1412 aa24.73■■□□□ 1.55
SCAMP3-208ENST00000490999 ANKLE2Q86XL3 938 aa24.73■■□□□ 1.55
SCAMP3-208ENST00000490999 IQGAP1P46940 1657 aa24.7■■□□□ 1.54
SCAMP3-208ENST00000490999 DEPDC5O75140 1603 aa24.7■■□□□ 1.54
SCAMP3-208ENST00000490999 MED14O60244 1454 aa24.7■■□□□ 1.54
SCAMP3-208ENST00000490999 THEMISQ8N1K5 641 aaPredicted RBP24.68■■□□□ 1.54
SCAMP3-208ENST00000490999 PHF23Q9BUL5 403 aaPredicted RBP24.68■■□□□ 1.54
SCAMP3-208ENST00000490999 ABCC3O15438 1527 aa24.66■■□□□ 1.54
SCAMP3-208ENST00000490999 STRCP1A6NGW2 1772 aa24.66■■□□□ 1.54
SCAMP3-208ENST00000490999 ARHGEF5Q12774 1597 aa24.66■■□□□ 1.54
SCAMP3-208ENST00000490999 RNF17Q9BXT8 1623 aaKnown RBP24.64■■□□□ 1.54
SCAMP3-208ENST00000490999 LRRC7Q96NW7 1537 aa24.64■■□□□ 1.53
SCAMP3-208ENST00000490999 ERVK-7P63135 1459 aa24.63■■□□□ 1.53
SCAMP3-208ENST00000490999 SYNMO15061 1565 aa24.62■■□□□ 1.53
SCAMP3-208ENST00000490999 ZC3H13Q5T200 1668 aaKnown RBP24.6■■□□□ 1.53
SCAMP3-208ENST00000490999 MROH1Q8NDA8 1641 aa24.59■■□□□ 1.53
SCAMP3-208ENST00000490999 RSPH4AQ5TD94 716 aa24.57■■□□□ 1.52
SCAMP3-208ENST00000490999 TSPY4P0CV99 314 aa24.56■■□□□ 1.52
SCAMP3-208ENST00000490999 TSPY10P0CW01 314 aa24.56■■□□□ 1.52
SCAMP3-208ENST00000490999 MAST1Q9Y2H9 1570 aa24.55■■□□□ 1.52
SCAMP3-208ENST00000490999 CEP152O94986 1710 aa24.55■■□□□ 1.52
SCAMP3-208ENST00000490999 EIF2AK4Q9P2K8 1649 aaKnown RBP24.53■■□□□ 1.52
SCAMP3-208ENST00000490999 UBR1Q8IWV7 1749 aa24.53■■□□□ 1.52
SCAMP3-208ENST00000490999 SCAF11Q99590 1463 aaKnown RBP24.52■■□□□ 1.52
SCAMP3-208ENST00000490999 LRRC9Q6ZRR7 1453 aa24.5■■□□□ 1.51
SCAMP3-208ENST00000490999 ARHGAP23Q9P227 1491 aa24.45■■□□□ 1.51
SCAMP3-208ENST00000490999 LTKP29376 864 aa24.45■■□□□ 1.5
SCAMP3-208ENST00000490999 SLIT1O75093 1534 aa24.44■■□□□ 1.5
SCAMP3-208ENST00000490999 PRDM15P57071 1507 aaPredicted RBP24.43■■□□□ 1.5
SCAMP3-208ENST00000490999 DUOX2Q9NRD8 1548 aa24.42■■□□□ 1.5
SCAMP3-208ENST00000490999 RGS17Q9UGC6 210 aaPredicted RBP24.42■■□□□ 1.5
SCAMP3-208ENST00000490999 XIRP1Q702N8 1843 aaKnown RBP24.41■■□□□ 1.5
SCAMP3-208ENST00000490999 TXNDC2Q86VQ3 553 aa24.41■■□□□ 1.5
SCAMP3-208ENST00000490999 VPS8Q8N3P4 1428 aa24.41■■□□□ 1.5
SCAMP3-208ENST00000490999 MYOM3Q5VTT5 1437 aa24.4■■□□□ 1.5
SCAMP3-208ENST00000490999 CFAP65Q6ZU64 1925 aaKnown RBP24.39■■□□□ 1.5
SCAMP3-208ENST00000490999 PIK3C2BO00750 1634 aa24.39■■□□□ 1.5
SCAMP3-208ENST00000490999 KANK4Q5T7N3 995 aaPredicted RBP24.39■■□□□ 1.49
SCAMP3-208ENST00000490999 KIF15Q9NS87 1388 aa24.38■■□□□ 1.49
SCAMP3-208ENST00000490999 ARHGAP31Q2M1Z3 1444 aa24.35■■□□□ 1.49
SCAMP3-208ENST00000490999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.34■■□□□ 1.49
SCAMP3-208ENST00000490999 ERBINQ96RT1 1412 aa24.34■■□□□ 1.49
SCAMP3-208ENST00000490999 CROCC2H7BZ55 1655 aa24.34■■□□□ 1.49
SCAMP3-208ENST00000490999 TMEM94Q12767 1356 aa24.33■■□□□ 1.49
SCAMP3-208ENST00000490999 TMEM2Q9UHN6 1383 aa24.33■■□□□ 1.49
SCAMP3-208ENST00000490999 EID1Q9Y6B2 187 aa24.32■■□□□ 1.48
SCAMP3-208ENST00000490999 MAP3K1Q13233 1512 aa24.31■■□□□ 1.48
SCAMP3-208ENST00000490999 RBM33Q96EV2 1170 aaKnown RBP24.31■■□□□ 1.48
SCAMP3-208ENST00000490999 RRP7BPQ9NSQ0 103 aa24.31■■□□□ 1.48
SCAMP3-208ENST00000490999 ABCC5O15440 1437 aa24.3■■□□□ 1.48
SCAMP3-208ENST00000490999 EFCAB6Q5THR3 1501 aa24.3■■□□□ 1.48
SCAMP3-208ENST00000490999 FAM135BQ49AJ0 1406 aa24.29■■□□□ 1.48
SCAMP3-208ENST00000490999 ROBO1Q9Y6N7 1651 aa24.29■■□□□ 1.48
SCAMP3-208ENST00000490999 STAG3Q9UJ98 1225 aa24.28■■□□□ 1.48
SCAMP3-208ENST00000490999 POTEAQ6S8J7 498 aa24.27■■□□□ 1.48
SCAMP3-208ENST00000490999 SLC26A8Q96RN1 970 aa24.26■■□□□ 1.47
SCAMP3-208ENST00000490999 PTPN23Q9H3S7 1636 aa24.24■■□□□ 1.47
SCAMP3-208ENST00000490999 DAPK1P53355 1430 aa24.24■■□□□ 1.47
SCAMP3-208ENST00000490999 KANK1Q14678 1352 aa24.23■■□□□ 1.47
SCAMP3-208ENST00000490999 ADGRB3O60242 1522 aa24.22■■□□□ 1.47
SCAMP3-208ENST00000490999 SETD1AO15047 1707 aaKnown RBP24.21■■□□□ 1.47
SCAMP3-208ENST00000490999 TET3O43151 1660 aa24.21■■□□□ 1.47
SCAMP3-208ENST00000490999 IDI1Q13907 227 aa24.21■■□□□ 1.47
SCAMP3-208ENST00000490999 NWD1Q149M9 1564 aa24.2■■□□□ 1.47
SCAMP3-208ENST00000490999 LMTK2Q8IWU2 1503 aa24.2■■□□□ 1.47
SCAMP3-208ENST00000490999 LOC105371045A0A1W2PR82 267 aa24.2■■□□□ 1.46
SCAMP3-208ENST00000490999 KCNA6P17658 529 aa24.2■■□□□ 1.46
SCAMP3-208ENST00000490999 PROSER2Q86WR7 435 aaPredicted RBP24.2■■□□□ 1.46
SCAMP3-208ENST00000490999 KDM5AP29375 1690 aaKnown RBP24.2■■□□□ 1.46
SCAMP3-208ENST00000490999 NKTRP30414 1462 aaKnown RBP24.19■■□□□ 1.46
SCAMP3-208ENST00000490999 CHIC2Q9UKJ5 165 aa24.17■■□□□ 1.46
SCAMP3-208ENST00000490999 NOS1P29475 1434 aa24.16■■□□□ 1.46
SCAMP3-208ENST00000490999 FGD6Q6ZV73 1430 aa24.15■■□□□ 1.46
SCAMP3-208ENST00000490999 BCANQ96GW7 911 aa24.13■■□□□ 1.45
SCAMP3-208ENST00000490999 MSH6P52701 1360 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms