RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 SAMD9Q5K651 1589 aa13.47□□□□□ -0.25
BRD9-209ENST00000490814 DAPK1P53355 1430 aa13.47□□□□□ -0.25
BRD9-209ENST00000490814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.253e-7■■■□□ 17.2
BRD9-209ENST00000490814 LRRIQ1Q96JM4 1722 aa13.47□□□□□ -0.25
BRD9-209ENST00000490814 FGD1P98174 961 aa13.46□□□□□ -0.25
BRD9-209ENST00000490814 RGL3Q3MIN7 710 aa13.46□□□□□ -0.25
BRD9-209ENST00000490814 EFCAB2Q5VUJ9 269 aa13.46□□□□□ -0.25
BRD9-209ENST00000490814 DCAF11Q8TEB1 546 aa13.46□□□□□ -0.25
BRD9-209ENST00000490814 MIA2Q96PC5 1412 aa13.46□□□□□ -0.26
BRD9-209ENST00000490814 RPRD2Q5VT52 1461 aaKnown RBP13.45□□□□□ -0.26
BRD9-209ENST00000490814 ABCC5O15440 1437 aa13.45□□□□□ -0.26
BRD9-209ENST00000490814 TSPY4P0CV99 314 aa13.45□□□□□ -0.26
BRD9-209ENST00000490814 TSPY10P0CW01 314 aa13.45□□□□□ -0.26
BRD9-209ENST00000490814 HECW1Q76N89 1606 aa13.45□□□□□ -0.26
BRD9-209ENST00000490814 ST20-MTHFSA0A0A6YYL1 179 aa13.44□□□□□ -0.26
BRD9-209ENST00000490814 RBM10P98175 930 aaKnown RBP13.44□□□□□ -0.26
BRD9-209ENST00000490814 TCOF1Q13428 1488 aaKnown RBP13.43□□□□□ -0.26
BRD9-209ENST00000490814 WASHC2CQ9Y4E1 1318 aa13.43□□□□□ -0.26
BRD9-209ENST00000490814 NUP155O75694 1391 aa13.42□□□□□ -0.26
BRD9-209ENST00000490814 ABCC2Q92887 1545 aa13.42□□□□□ -0.26
BRD9-209ENST00000490814 PDIA4P13667 645 aaKnown RBP13.42□□□□□ -0.26
BRD9-209ENST00000490814 AAMPQ13685 434 aa13.42□□□□□ -0.26
BRD9-209ENST00000490814 CD109Q6YHK3 1445 aa13.4□□□□□ -0.26
BRD9-209ENST00000490814 PNISRQ8TF01 805 aaKnown RBP13.4□□□□□ -0.26
BRD9-209ENST00000490814 RAPGEF6Q8TEU7 1601 aa13.4□□□□□ -0.26
BRD9-209ENST00000490814 EXOC6Q8TAG9 804 aa13.4□□□□□ -0.26
BRD9-209ENST00000490814 CC2D1BQ5T0F9 858 aaKnown RBP13.39□□□□□ -0.27
BRD9-209ENST00000490814 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
BRD9-209ENST00000490814 TEX14Q8IWB6 1497 aa13.39□□□□□ -0.27
BRD9-209ENST00000490814 ROCK1Q13464 1354 aa13.38□□□□□ -0.27
BRD9-209ENST00000490814 GCC2Q8IWJ2 1684 aa13.38□□□□□ -0.27
BRD9-209ENST00000490814 GGT6Q6P531 493 aa13.37□□□□□ -0.27
BRD9-209ENST00000490814 USP35Q9P2H5 1018 aa13.37□□□□□ -0.27
BRD9-209ENST00000490814 TROQ12816 1431 aaPredicted RBP13.37□□□□□ -0.27
BRD9-209ENST00000490814 SPATA31E1Q6ZUB1 1445 aa13.37□□□□□ -0.27
BRD9-209ENST00000490814 DHX29Q7Z478 1369 aaKnown RBP13.37□□□□□ -0.27
BRD9-209ENST00000490814 ANKRD30AQ9BXX3 1397 aa13.37□□□□□ -0.27
BRD9-209ENST00000490814 RCAN3Q9UKA8 241 aa13.36□□□□□ -0.27
BRD9-209ENST00000490814 SHROOM2Q13796 1616 aa13.36□□□□□ -0.27
BRD9-209ENST00000490814 PLIN1O60240 522 aa13.36□□□□□ -0.27
BRD9-209ENST00000490814 PDE4AP27815 886 aa13.36□□□□□ -0.27
BRD9-209ENST00000490814 ADCY10Q96PN6 1610 aa13.35□□□□□ -0.27
BRD9-209ENST00000490814 KIAA1107Q9UPP5 1409 aa13.35□□□□□ -0.27
BRD9-209ENST00000490814 PPM1GO15355 546 aaPredicted RBP13.34□□□□□ -0.27
BRD9-209ENST00000490814 WDR7Q9Y4E6 1490 aa13.34□□□□□ -0.27
BRD9-209ENST00000490814 BCL11BQ9C0K0 894 aaPredicted RBP13.34□□□□□ -0.27
BRD9-209ENST00000490814 ROCK2O75116 1388 aaKnown RBP13.34□□□□□ -0.27
BRD9-209ENST00000490814 RRP1P56182 461 aaKnown RBP13.33□□□□□ -0.27
BRD9-209ENST00000490814 CDCA7LQ96GN5 454 aa13.33□□□□□ -0.27
BRD9-209ENST00000490814 KIF15Q9NS87 1388 aa13.33□□□□□ -0.27
BRD9-209ENST00000490814 ANKRD50Q9ULJ7 1429 aa13.33□□□□□ -0.28
BRD9-209ENST00000490814 HSP90AA2PQ14568 343 aaPredicted RBP13.33□□□□□ -0.28
BRD9-209ENST00000490814 MYBBP1AQ9BQG0 1328 aaKnown RBP13.33□□□□□ -0.28
BRD9-209ENST00000490814 ABCA8O94911 1581 aa13.32□□□□□ -0.28
BRD9-209ENST00000490814 SKAP1Q86WV1 359 aa13.32□□□□□ -0.28
BRD9-209ENST00000490814 FAM43AQ8N2R8 423 aa13.32□□□□□ -0.28
BRD9-209ENST00000490814 TCERG1O14776 1098 aaKnown RBP13.32□□□□□ -0.28
BRD9-209ENST00000490814 PZPP20742 1482 aa13.31□□□□□ -0.28
BRD9-209ENST00000490814 SPAG9O60271 1321 aaKnown RBP13.31□□□□□ -0.28
BRD9-209ENST00000490814 ARHGAP5Q13017 1502 aa13.31□□□□□ -0.28
BRD9-209ENST00000490814 ESF1Q9H501 851 aaKnown RBP13.31□□□□□ -0.28
BRD9-209ENST00000490814 TSPOAP1O95153 1857 aa13.31□□□□□ -0.28
BRD9-209ENST00000490814 CAMSAP2Q08AD1 1489 aa13.31□□□□□ -0.28
BRD9-209ENST00000490814 SLC4A3P48751 1232 aa13.31□□□□□ -0.28
BRD9-209ENST00000490814 RALBP1Q15311 655 aa13.31□□□□□ -0.28
BRD9-209ENST00000490814 SCAPERQ9BY12 1400 aa13.3□□□□□ -0.28
BRD9-209ENST00000490814 NBPF1Q3BBV0 1214 aa13.29□□□□□ -0.28
BRD9-209ENST00000490814 NLRP13Q86W25 1043 aa13.29□□□□□ -0.28
BRD9-209ENST00000490814 KIF3BO15066 747 aa13.29□□□□□ -0.28
BRD9-209ENST00000490814 KTN1Q86UP2 1357 aaKnown RBP13.28□□□□□ -0.28
BRD9-209ENST00000490814 GSE1Q14687 1217 aa13.28□□□□□ -0.28
BRD9-209ENST00000490814 DNMT1P26358 1616 aaKnown RBP13.27□□□□□ -0.28
BRD9-209ENST00000490814 ZCCHC11Q5TAX3 1644 aaKnown RBP13.27□□□□□ -0.28
BRD9-209ENST00000490814 RRP9O43818 475 aaKnown RBP13.27□□□□□ -0.28
BRD9-209ENST00000490814 BACH2Q9BYV9 841 aa13.26□□□□□ -0.29
BRD9-209ENST00000490814 GPATCH8Q9UKJ3 1502 aaKnown RBP13.25□□□□□ -0.29
BRD9-209ENST00000490814 BRD4O60885 1362 aaPredicted RBP13.25□□□□□ -0.29
BRD9-209ENST00000490814 FANCAO15360 1455 aa13.25□□□□□ -0.29
BRD9-209ENST00000490814 KIF14Q15058 1648 aa13.25□□□□□ -0.29
BRD9-209ENST00000490814 PANK3Q9H999 370 aa13.25□□□□□ -0.29
BRD9-209ENST00000490814 UHRF1BP1LA0JNW5 1464 aa13.24□□□□□ -0.29
BRD9-209ENST00000490814 RNF123Q5XPI4 1314 aa13.24□□□□□ -0.29
BRD9-209ENST00000490814 AEBP2Q6ZN18 517 aaPredicted RBP13.24□□□□□ -0.29
BRD9-209ENST00000490814 CRBNQ96SW2 442 aa13.24□□□□□ -0.29
BRD9-209ENST00000490814 BCORL1Q5H9F3 1711 aa13.24□□□□□ -0.29
BRD9-209ENST00000490814 CHGAP10645 457 aaKnown RBP13.23□□□□□ -0.29
BRD9-209ENST00000490814 DDRGK1Q96HY6 314 aa13.23□□□□□ -0.29
BRD9-209ENST00000490814 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
BRD9-209ENST00000490814 NFKBIBQ15653 356 aa13.22□□□□□ -0.29
BRD9-209ENST00000490814 HSP90AA1P07900 732 aaKnown RBP13.22□□□□□ -0.29
BRD9-209ENST00000490814 FRAT1Q92837 279 aaPredicted RBP13.22□□□□□ -0.29
BRD9-209ENST00000490814 ABCC10Q5T3U5 1492 aa13.21□□□□□ -0.29
BRD9-209ENST00000490814 WDR43Q15061 677 aaKnown RBP eCLIP13.21□□□□□ -0.29
BRD9-209ENST00000490814 ADGRL1O94910 1474 aa13.2□□□□□ -0.3
BRD9-209ENST00000490814 CCDC144AA2RUR9 1427 aa13.19□□□□□ -0.3
BRD9-209ENST00000490814 PLCH2O75038 1416 aa13.19□□□□□ -0.3
BRD9-209ENST00000490814 RGS3P49796 1198 aa13.19□□□□□ -0.3
BRD9-209ENST00000490814 TRAPPC8Q9Y2L5 1435 aa13.19□□□□□ -0.3
BRD9-209ENST00000490814 MS4A1P11836 297 aa13.19□□□□□ -0.3
BRD9-209ENST00000490814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms