RNA–Protein interactions for RNA: ENST00000490787.1

PDCD11-205, Transcript of programmed cell death 11, humanhuman

Gene PDCD11, Length 101 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-205ENST00000490787 PLXNC1O60486 1568 aa6.07□□□□□ -1.44
PDCD11-205ENST00000490787 KIF3BO15066 747 aa6.07□□□□□ -1.44
PDCD11-205ENST00000490787 CHIC1Q5VXU3 224 aa6.07□□□□□ -1.44
PDCD11-205ENST00000490787 STRCP1A6NGW2 1772 aa6.07□□□□□ -1.44
PDCD11-205ENST00000490787 CPS1P31327 1500 aa6.06□□□□□ -1.44
PDCD11-205ENST00000490787 RBM33Q96EV2 1170 aaKnown RBP6.06□□□□□ -1.44
PDCD11-205ENST00000490787 NPHP4O75161 1426 aaPredicted RBP6.06□□□□□ -1.44
PDCD11-205ENST00000490787 INO80Q9ULG1 1556 aaPredicted RBP6.06□□□□□ -1.44
PDCD11-205ENST00000490787 LRRC7Q96NW7 1537 aa6.05□□□□□ -1.44
PDCD11-205ENST00000490787 SRCAPQ6ZRS2 3230 aa6.05□□□□□ -1.44
PDCD11-205ENST00000490787 KIAA1107Q9UPP5 1409 aa6.05□□□□□ -1.44
PDCD11-205ENST00000490787 DHX29Q7Z478 1369 aaKnown RBP6.05□□□□□ -1.44
PDCD11-205ENST00000490787 CCNB3Q8WWL7 1395 aa6.05□□□□□ -1.44
PDCD11-205ENST00000490787 WASHC2CQ9Y4E1 1318 aa6.04□□□□□ -1.44
PDCD11-205ENST00000490787 CCDC18Q5T9S5 1454 aa6.04□□□□□ -1.44
PDCD11-205ENST00000490787 MBD5Q9P267 1494 aa6.04□□□□□ -1.44
PDCD11-205ENST00000490787 LTKP29376 864 aa6.04□□□□□ -1.44
PDCD11-205ENST00000490787 THEMISQ8N1K5 641 aaPredicted RBP6.04□□□□□ -1.44
PDCD11-205ENST00000490787 MIA2Q96PC5 1412 aa6.04□□□□□ -1.44
PDCD11-205ENST00000490787 POLR1AO95602 1720 aaPredicted RBP6.04□□□□□ -1.44
PDCD11-205ENST00000490787 MED14O60244 1454 aa6.02□□□□□ -1.44
PDCD11-205ENST00000490787 PZPP20742 1482 aa6.02□□□□□ -1.44
PDCD11-205ENST00000490787 UGGT1Q9NYU2 1555 aa6.02□□□□□ -1.45
PDCD11-205ENST00000490787 CFAP65Q6ZU64 1925 aaKnown RBP6.02□□□□□ -1.45
PDCD11-205ENST00000490787 FAM135AQ9P2D6 1515 aa6.01□□□□□ -1.45
PDCD11-205ENST00000490787 SETD1AO15047 1707 aaKnown RBP6.01□□□□□ -1.45
PDCD11-205ENST00000490787 PLEKHH2Q8IVE3 1493 aa6.01□□□□□ -1.45
PDCD11-205ENST00000490787 FYCO1Q9BQS8 1478 aa6.01□□□□□ -1.45
PDCD11-205ENST00000490787 IQGAP1P46940 1657 aa6.01□□□□□ -1.45
PDCD11-205ENST00000490787 ADGBQ8N7X0 1667 aa6.01□□□□□ -1.45
PDCD11-205ENST00000490787 TXNDC2Q86VQ3 553 aa6□□□□□ -1.45
PDCD11-205ENST00000490787 MTUS2Q5JR59 1369 aa6□□□□□ -1.45
PDCD11-205ENST00000490787 TIAM1Q13009 1591 aa6□□□□□ -1.45
PDCD11-205ENST00000490787 RTEL1-TNFRSF6BF6WH68 1400 aa5.99□□□□□ -1.45
PDCD11-205ENST00000490787 KDM5DQ9BY66 1539 aa5.99□□□□□ -1.45
PDCD11-205ENST00000490787 DEPDC5O75140 1603 aa5.99□□□□□ -1.45
PDCD11-205ENST00000490787 XIRP1Q702N8 1843 aaKnown RBP5.99□□□□□ -1.45
PDCD11-205ENST00000490787 NCOA2Q15596 1464 aa5.99□□□□□ -1.45
PDCD11-205ENST00000490787 NLRP1Q9C000 1473 aa5.99□□□□□ -1.45
PDCD11-205ENST00000490787 TMEM94Q12767 1356 aa5.98□□□□□ -1.45
PDCD11-205ENST00000490787 UPF1Q92900 1129 aaKnown RBP eCLIP5.98□□□□□ -1.45
PDCD11-205ENST00000490787 TRIM52Q96A61 297 aa5.98□□□□□ -1.45
PDCD11-205ENST00000490787 SLC26A8Q96RN1 970 aa5.98□□□□□ -1.45
PDCD11-205ENST00000490787 RNF17Q9BXT8 1623 aaKnown RBP5.98□□□□□ -1.45
PDCD11-205ENST00000490787 FAM135BQ49AJ0 1406 aa5.98□□□□□ -1.45
PDCD11-205ENST00000490787 ZC3H13Q5T200 1668 aaKnown RBP5.98□□□□□ -1.45
PDCD11-205ENST00000490787 ERVK-7P63135 1459 aa5.97□□□□□ -1.45
PDCD11-205ENST00000490787 PROSER2Q86WR7 435 aaPredicted RBP5.97□□□□□ -1.45
PDCD11-205ENST00000490787 ABCC3O15438 1527 aa5.97□□□□□ -1.45
PDCD11-205ENST00000490787 SCAF11Q99590 1463 aaKnown RBP5.96□□□□□ -1.45
PDCD11-205ENST00000490787 CAMSAP2Q08AD1 1489 aa5.96□□□□□ -1.46
PDCD11-205ENST00000490787 CCDC141Q6ZP82 1450 aa5.96□□□□□ -1.46
PDCD11-205ENST00000490787 ROBO1Q9Y6N7 1651 aa5.95□□□□□ -1.46
PDCD11-205ENST00000490787 SYNMO15061 1565 aa5.95□□□□□ -1.46
PDCD11-205ENST00000490787 KCNA6P17658 529 aa5.95□□□□□ -1.46
PDCD11-205ENST00000490787 UBR1Q8IWV7 1749 aa5.95□□□□□ -1.46
PDCD11-205ENST00000490787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.95□□□□□ -1.46
PDCD11-205ENST00000490787 ARHGAP23Q9P227 1491 aa5.95□□□□□ -1.46
PDCD11-205ENST00000490787 CEP162Q5TB80 1403 aa5.94□□□□□ -1.46
PDCD11-205ENST00000490787 TSPY4P0CV99 314 aa5.94□□□□□ -1.46
PDCD11-205ENST00000490787 TSPY10P0CW01 314 aa5.94□□□□□ -1.46
PDCD11-205ENST00000490787 IDI1Q13907 227 aa5.94□□□□□ -1.46
PDCD11-205ENST00000490787 SLAIN2Q9P270 581 aa5.94□□□□□ -1.46
PDCD11-205ENST00000490787 EID1Q9Y6B2 187 aa5.94□□□□□ -1.46
PDCD11-205ENST00000490787 LRP6O75581 1613 aa5.94□□□□□ -1.46
PDCD11-205ENST00000490787 MAP3K1Q13233 1512 aa5.94□□□□□ -1.46
PDCD11-205ENST00000490787 TMEM2Q9UHN6 1383 aa5.93□□□□□ -1.46
PDCD11-205ENST00000490787 MROH1Q8NDA8 1641 aa5.93□□□□□ -1.46
PDCD11-205ENST00000490787 NUTM2BA6NNL0 878 aaPredicted RBP5.93□□□□□ -1.46
PDCD11-205ENST00000490787 NUTM2EB1AL46 878 aaPredicted RBP5.93□□□□□ -1.46
PDCD11-205ENST00000490787 NUTM2AQ8IVF1 878 aaPredicted RBP5.93□□□□□ -1.46
PDCD11-205ENST00000490787 RRP7BPQ9NSQ0 103 aa5.93□□□□□ -1.46
PDCD11-205ENST00000490787 CEP152O94986 1710 aa5.93□□□□□ -1.46
PDCD11-205ENST00000490787 SLIT1O75093 1534 aa5.93□□□□□ -1.46
PDCD11-205ENST00000490787 KANK4Q5T7N3 995 aaPredicted RBP5.92□□□□□ -1.46
PDCD11-205ENST00000490787 RSPH4AQ5TD94 716 aa5.92□□□□□ -1.46
PDCD11-205ENST00000490787 MEX3CQ5U5Q3 659 aaKnown RBP5.92□□□□□ -1.46
PDCD11-205ENST00000490787 BCANQ96GW7 911 aa5.92□□□□□ -1.46
PDCD11-205ENST00000490787 STAG3Q9UJ98 1225 aa5.92□□□□□ -1.46
PDCD11-205ENST00000490787 JCADQ9P266 1359 aa5.92□□□□□ -1.46
PDCD11-205ENST00000490787 EHBP1L1Q8N3D4 1523 aa5.91□□□□□ -1.46
PDCD11-205ENST00000490787 RXRBP28702 533 aa5.91□□□□□ -1.46
PDCD11-205ENST00000490787 NUTM2DQ5VT03 806 aaPredicted RBP5.91□□□□□ -1.46
PDCD11-205ENST00000490787 PIK3C2BO00750 1634 aa5.91□□□□□ -1.46
PDCD11-205ENST00000490787 TET3O43151 1660 aa5.91□□□□□ -1.46
PDCD11-205ENST00000490787 PHLPP1O60346 1717 aa5.91□□□□□ -1.46
PDCD11-205ENST00000490787 DDX17Q92841 729 aaKnown RBP5.9□□□□□ -1.46
PDCD11-205ENST00000490787 MSH6P52701 1360 aa5.9□□□□□ -1.47
PDCD11-205ENST00000490787 PRDM15P57071 1507 aaPredicted RBP5.89□□□□□ -1.47
PDCD11-205ENST00000490787 ARHGEF5Q12774 1597 aa5.89□□□□□ -1.47
PDCD11-205ENST00000490787 ZNF772Q68DY9 489 aaPredicted RBP5.89□□□□□ -1.47
PDCD11-205ENST00000490787 CHIC2Q9UKJ5 165 aa5.89□□□□□ -1.47
PDCD11-205ENST00000490787 AFF2P51816 1311 aa5.89□□□□□ -1.47
PDCD11-205ENST00000490787 COL16A1Q07092 1604 aaPredicted RBP5.88□□□□□ -1.47
PDCD11-205ENST00000490787 C14orf37Q86TY3 774 aa5.88□□□□□ -1.47
PDCD11-205ENST00000490787 KIF15Q9NS87 1388 aa5.88□□□□□ -1.47
PDCD11-205ENST00000490787 ARHGAP31Q2M1Z3 1444 aa5.88□□□□□ -1.47
PDCD11-205ENST00000490787 EFCAB6Q5THR3 1501 aa5.88□□□□□ -1.47
PDCD11-205ENST00000490787 BRINP3Q76B58 766 aa5.87□□□□□ -1.47
PDCD11-205ENST00000490787 QTRT2Q9H974 415 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms