RNA–Protein interactions for RNA: ENST00000490710.1

PTK7-217, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-217ENST00000490710 PTPRMP28827 1452 aa23.77■■□□□ 1.4
PTK7-217ENST00000490710 CNTLNQ9NXG0 1405 aa23.75■■□□□ 1.39
PTK7-217ENST00000490710 RNF17Q9BXT8 1623 aaKnown RBP23.73■■□□□ 1.39
PTK7-217ENST00000490710 ANKRD50Q9ULJ7 1429 aa23.71■■□□□ 1.39
PTK7-217ENST00000490710 MROH2AA6NES4 1674 aa23.7■■□□□ 1.38
PTK7-217ENST00000490710 CLTCQ00610 1675 aaKnown RBP23.7■■□□□ 1.38
PTK7-217ENST00000490710 FAM135AQ9P2D6 1515 aa23.69■■□□□ 1.38
PTK7-217ENST00000490710 WASHC2CQ9Y4E1 1318 aa23.68■■□□□ 1.38
PTK7-217ENST00000490710 ZMYM3Q14202 1370 aa23.66■■□□□ 1.38
PTK7-217ENST00000490710 C3P01024 1663 aa23.66■■□□□ 1.38
PTK7-217ENST00000490710 DEPDC5O75140 1603 aa23.66■■□□□ 1.38
PTK7-217ENST00000490710 MROH1Q8NDA8 1641 aa23.66■■□□□ 1.38
PTK7-217ENST00000490710 KDM5DQ9BY66 1539 aa23.65■■□□□ 1.38
PTK7-217ENST00000490710 CEBPAP49715 358 aaPredicted RBP23.65■■□□□ 1.38
PTK7-217ENST00000490710 PLPPR3Q6T4P5 718 aa23.65■■□□□ 1.38
PTK7-217ENST00000490710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.63■■□□□ 1.37
PTK7-217ENST00000490710 ZC3H13Q5T200 1668 aaKnown RBP23.63■■□□□ 1.37
PTK7-217ENST00000490710 PRDM15P57071 1507 aaPredicted RBP23.63■■□□□ 1.37
PTK7-217ENST00000490710 KANK1Q14678 1352 aa23.62■■□□□ 1.37
PTK7-217ENST00000490710 GCC2Q8IWJ2 1684 aa23.6■■□□□ 1.37
PTK7-217ENST00000490710 NAIPQ13075 1403 aa23.59■■□□□ 1.37
PTK7-217ENST00000490710 ABCC3O15438 1527 aa23.59■■□□□ 1.37
PTK7-217ENST00000490710 HFM1A2PYH4 1435 aa23.59■■□□□ 1.37
PTK7-217ENST00000490710 SETD1BQ9UPS6 1966 aaKnown RBP23.58■■□□□ 1.37
PTK7-217ENST00000490710 CEP152O94986 1710 aa23.58■■□□□ 1.37
PTK7-217ENST00000490710 UNC13BO14795 1591 aa23.56■■□□□ 1.36
PTK7-217ENST00000490710 VWDEQ8N2E2 1590 aa23.56■■□□□ 1.36
PTK7-217ENST00000490710 NPATQ14207 1427 aa23.54■■□□□ 1.36
PTK7-217ENST00000490710 CAMSAP1Q5T5Y3 1602 aa23.53■■□□□ 1.36
PTK7-217ENST00000490710 PZPP20742 1482 aa23.52■■□□□ 1.36
PTK7-217ENST00000490710 LMTK2Q8IWU2 1503 aa23.52■■□□□ 1.36
PTK7-217ENST00000490710 PREX1Q8TCU6 1659 aa23.49■■□□□ 1.35
PTK7-217ENST00000490710 NUP155O75694 1391 aa23.49■■□□□ 1.35
PTK7-217ENST00000490710 ARHGAP31Q2M1Z3 1444 aa23.49■■□□□ 1.35
PTK7-217ENST00000490710 FBXO31Q5XUX0 539 aaPredicted RBP23.48■■□□□ 1.35
PTK7-217ENST00000490710 CFAP65Q6ZU64 1925 aaKnown RBP23.47■■□□□ 1.35
PTK7-217ENST00000490710 IQGAP3Q86VI3 1631 aa23.47■■□□□ 1.35
PTK7-217ENST00000490710 TET3O43151 1660 aa23.45■■□□□ 1.34
PTK7-217ENST00000490710 UHRF1BP1Q6BDS2 1440 aa23.44■■□□□ 1.34
PTK7-217ENST00000490710 SETD5Q9C0A6 1442 aa23.44■■□□□ 1.34
PTK7-217ENST00000490710 ACIN1Q9UKV3 1341 aaKnown RBP23.43■■□□□ 1.34
PTK7-217ENST00000490710 EFCAB6Q5THR3 1501 aa23.43■■□□□ 1.34
PTK7-217ENST00000490710 LMTK3Q96Q04 1460 aa23.43■■□□□ 1.34
PTK7-217ENST00000490710 TNRQ92752 1358 aa23.42■■□□□ 1.34
PTK7-217ENST00000490710 TRIM52Q96A61 297 aa23.42■■□□□ 1.34
PTK7-217ENST00000490710 SPATA31D1Q6ZQQ2 1576 aa23.42■■□□□ 1.34
PTK7-217ENST00000490710 ERVK-7P63135 1459 aa23.4■■□□□ 1.34
PTK7-217ENST00000490710 RPRD2Q5VT52 1461 aaKnown RBP23.4■■□□□ 1.34
PTK7-217ENST00000490710 MYO3AQ8NEV4 1616 aa23.38■■□□□ 1.33
PTK7-217ENST00000490710 E9PCH4 1651 aa23.36■■□□□ 1.33
PTK7-217ENST00000490710 TRIM26Q12899 539 aaPredicted RBP23.35■■□□□ 1.33
PTK7-217ENST00000490710 HRCP23327 699 aa23.34■■□□□ 1.33
PTK7-217ENST00000490710 RAB3GAP2Q9H2M9 1393 aa23.34■■□□□ 1.33
PTK7-217ENST00000490710 NLRP1Q9C000 1473 aa23.34■■□□□ 1.33
PTK7-217ENST00000490710 ZNF142P52746 1687 aaPredicted RBP23.34■■□□□ 1.33
PTK7-217ENST00000490710 CEP170BQ9Y4F5 1589 aaPredicted RBP23.33■■□□□ 1.33
PTK7-217ENST00000490710 NOS1P29475 1434 aa23.33■■□□□ 1.32
PTK7-217ENST00000490710 A2ML1A8K2U0 1454 aa23.32■■□□□ 1.32
PTK7-217ENST00000490710 HSPA2P54652 639 aa23.32■■□□□ 1.32
PTK7-217ENST00000490710 SLC4A1APQ9BWU0 796 aaKnown RBP23.31■■□□□ 1.32
PTK7-217ENST00000490710 SLC52A1Q9NWF4 448 aa23.28■■□□□ 1.32
PTK7-217ENST00000490710 SYNMO15061 1565 aa23.27■■□□□ 1.32
PTK7-217ENST00000490710 PKD2Q13563 968 aa23.27■■□□□ 1.32
PTK7-217ENST00000490710 THEMISQ8N1K5 641 aaPredicted RBP23.26■■□□□ 1.31
PTK7-217ENST00000490710 MPHOSPH9Q99550 1183 aa23.26■■□□□ 1.31
PTK7-217ENST00000490710 IDI1Q13907 227 aa23.25■■□□□ 1.31
PTK7-217ENST00000490710 UGGT1Q9NYU2 1555 aa23.25■■□□□ 1.31
PTK7-217ENST00000490710 SPHKAPQ2M3C7 1700 aa23.23■■□□□ 1.31
PTK7-217ENST00000490710 PTPRTO14522 1441 aa23.22■■□□□ 1.31
PTK7-217ENST00000490710 PIK3C2BO00750 1634 aa23.22■■□□□ 1.31
PTK7-217ENST00000490710 UBR1Q8IWV7 1749 aa23.22■■□□□ 1.31
PTK7-217ENST00000490710 KDM5AP29375 1690 aaKnown RBP23.2■■□□□ 1.3
PTK7-217ENST00000490710 STAG3Q9UJ98 1225 aa23.2■■□□□ 1.3
PTK7-217ENST00000490710 PLA2R1Q13018 1463 aa23.19■■□□□ 1.3
PTK7-217ENST00000490710 STRCQ7RTU9 1775 aa23.19■■□□□ 1.3
PTK7-217ENST00000490710 TRPM2O94759 1503 aa23.15■■□□□ 1.3
PTK7-217ENST00000490710 DMRT2Q9Y5R5 561 aa23.15■■□□□ 1.3
PTK7-217ENST00000490710 FOXD1Q16676 465 aa23.14■■□□□ 1.29
PTK7-217ENST00000490710 ADGRB3O60242 1522 aa23.13■■□□□ 1.29
PTK7-217ENST00000490710 ANKLE2Q86XL3 938 aa23.13■■□□□ 1.29
PTK7-217ENST00000490710 NCKAP5LQ9HCH0 1330 aa23.12■■□□□ 1.29
PTK7-217ENST00000490710 TMEM131LA2VDJ0 1609 aa23.11■■□□□ 1.29
PTK7-217ENST00000490710 MYO5BQ9ULV0 1848 aa23.11■■□□□ 1.29
PTK7-217ENST00000490710 CHGAP10645 457 aaKnown RBP23.11■■□□□ 1.29
PTK7-217ENST00000490710 SLIT1O75093 1534 aa23.1■■□□□ 1.29
PTK7-217ENST00000490710 POLR1AO95602 1720 aaPredicted RBP23.1■■□□□ 1.29
PTK7-217ENST00000490710 CLTCL1P53675 1640 aa23.09■■□□□ 1.29
PTK7-217ENST00000490710 TMEM2Q9UHN6 1383 aa23.09■■□□□ 1.29
PTK7-217ENST00000490710 ARHGAP23Q9P227 1491 aa23.09■■□□□ 1.29
PTK7-217ENST00000490710 KIF1BO60333 1816 aa23.08■■□□□ 1.29
PTK7-217ENST00000490710 TXNDC2Q86VQ3 553 aa23.07■■□□□ 1.28
PTK7-217ENST00000490710 EID1Q9Y6B2 187 aa23.07■■□□□ 1.28
PTK7-217ENST00000490710 HDGFP51858 240 aaKnown RBP23.06■■□□□ 1.28
PTK7-217ENST00000490710 CCDC144AA2RUR9 1427 aa23.04■■□□□ 1.28
PTK7-217ENST00000490710 LTKP29376 864 aa23.03■■□□□ 1.28
PTK7-217ENST00000490710 MED14O60244 1454 aa23.03■■□□□ 1.28
PTK7-217ENST00000490710 SCAF11Q99590 1463 aaKnown RBP23.03■■□□□ 1.28
PTK7-217ENST00000490710 NEURL4Q96JN8 1562 aa23.02■■□□□ 1.28
PTK7-217ENST00000490710 ABCF1Q8NE71 845 aaKnown RBP eCLIP23■■□□□ 1.27
PTK7-217ENST00000490710 PCGF6Q9BYE7 350 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms