RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 ATP10AO60312 1499 aa16.31■□□□□ 0.2
VARS2-210ENST00000490699 A2MP01023 1474 aa16.31■□□□□ 0.2
VARS2-210ENST00000490699 ERBINQ96RT1 1412 aa16.31■□□□□ 0.2
VARS2-210ENST00000490699 SETD5Q9C0A6 1442 aa16.31■□□□□ 0.2
VARS2-210ENST00000490699 HOXD11P31277 338 aaPredicted RBP16.31■□□□□ 0.2
VARS2-210ENST00000490699 ANKRD50Q9ULJ7 1429 aa16.3■□□□□ 0.2
VARS2-210ENST00000490699 NAIPQ13075 1403 aa16.29■□□□□ 0.2
VARS2-210ENST00000490699 YEATS2Q9ULM3 1422 aa16.29■□□□□ 0.2
VARS2-210ENST00000490699 DHX29Q7Z478 1369 aaKnown RBP16.28■□□□□ 0.2
VARS2-210ENST00000490699 EIF2AK4Q9P2K8 1649 aaKnown RBP16.28■□□□□ 0.2
VARS2-210ENST00000490699 REREQ9P2R6 1566 aa16.27■□□□□ 0.2
VARS2-210ENST00000490699 ARID4BQ4LE39 1312 aaPredicted RBP16.25■□□□□ 0.19
VARS2-210ENST00000490699 RAB3GAP2Q9H2M9 1393 aa16.24■□□□□ 0.19
VARS2-210ENST00000490699 KANK1Q14678 1352 aa16.23■□□□□ 0.19
VARS2-210ENST00000490699 KIF3BO15066 747 aa16.22■□□□□ 0.19
VARS2-210ENST00000490699 AGLP35573 1532 aa16.21■□□□□ 0.19
VARS2-210ENST00000490699 HRCP23327 699 aa16.21■□□□□ 0.19
VARS2-210ENST00000490699 TRIM52Q96A61 297 aa16.21■□□□□ 0.19
VARS2-210ENST00000490699 BCORL1Q5H9F3 1711 aa16.2■□□□□ 0.18
VARS2-210ENST00000490699 ESF1Q9H501 851 aaKnown RBP16.19■□□□□ 0.18
VARS2-210ENST00000490699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.183e-8■■■□□ 18.7
VARS2-210ENST00000490699 UNC13BO14795 1591 aa16.17■□□□□ 0.18
VARS2-210ENST00000490699 RNF17Q9BXT8 1623 aaKnown RBP16.17■□□□□ 0.18
VARS2-210ENST00000490699 GGT6Q6P531 493 aa16.17■□□□□ 0.18
VARS2-210ENST00000490699 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
VARS2-210ENST00000490699 NUP155O75694 1391 aa16.15■□□□□ 0.18
VARS2-210ENST00000490699 PRDM15P57071 1507 aaPredicted RBP16.14■□□□□ 0.18
VARS2-210ENST00000490699 FAM135AQ9P2D6 1515 aa16.14■□□□□ 0.18
VARS2-210ENST00000490699 MLECQ14165 292 aa16.13■□□□□ 0.17
VARS2-210ENST00000490699 ZC3H13Q5T200 1668 aaKnown RBP16.13■□□□□ 0.17
VARS2-210ENST00000490699 KDM5DQ9BY66 1539 aa16.13■□□□□ 0.17
VARS2-210ENST00000490699 WASHC2CQ9Y4E1 1318 aa16.12■□□□□ 0.17
VARS2-210ENST00000490699 IQGAP3Q86VI3 1631 aa16.11■□□□□ 0.17
VARS2-210ENST00000490699 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
VARS2-210ENST00000490699 CNTLNQ9NXG0 1405 aa16.09■□□□□ 0.17
VARS2-210ENST00000490699 MROH1Q8NDA8 1641 aa16.08■□□□□ 0.16
VARS2-210ENST00000490699 SIGLEC1Q9BZZ2 1709 aa16.08■□□□□ 0.16
VARS2-210ENST00000490699 TET3O43151 1660 aa16.07■□□□□ 0.16
VARS2-210ENST00000490699 CEP152O94986 1710 aa16.07■□□□□ 0.16
VARS2-210ENST00000490699 FER1L4A9Z1Z3 1794 aa16.06■□□□□ 0.16
VARS2-210ENST00000490699 VWDEQ8N2E2 1590 aa16.05■□□□□ 0.16
VARS2-210ENST00000490699 ABCC3O15438 1527 aa16.05■□□□□ 0.16
VARS2-210ENST00000490699 LMTK2Q8IWU2 1503 aa16.05■□□□□ 0.16
VARS2-210ENST00000490699 MPHOSPH9Q99550 1183 aa16.05■□□□□ 0.16
VARS2-210ENST00000490699 CLTCQ00610 1675 aaKnown RBP16.05■□□□□ 0.16
VARS2-210ENST00000490699 CCER1Q8TC90 406 aaPredicted RBP16.04■□□□□ 0.16
VARS2-210ENST00000490699 CAMSAP1Q5T5Y3 1602 aa16.04■□□□□ 0.16
VARS2-210ENST00000490699 PZPP20742 1482 aa16.03■□□□□ 0.16
VARS2-210ENST00000490699 EFCAB6Q5THR3 1501 aa16.03■□□□□ 0.16
VARS2-210ENST00000490699 MROH2AA6NES4 1674 aa16.02■□□□□ 0.16
VARS2-210ENST00000490699 PKD2Q13563 968 aa16.02■□□□□ 0.16
VARS2-210ENST00000490699 RPRD2Q5VT52 1461 aaKnown RBP16.02■□□□□ 0.15
VARS2-210ENST00000490699 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
VARS2-210ENST00000490699 MADDQ8WXG6 1647 aa15.99■□□□□ 0.15
VARS2-210ENST00000490699 ADAMTSL3P82987 1691 aa15.99■□□□□ 0.15
VARS2-210ENST00000490699 ARHGAP31Q2M1Z3 1444 aa15.98■□□□□ 0.15
VARS2-210ENST00000490699 POTEHQ6S545 545 aa15.98■□□□□ 0.15
VARS2-210ENST00000490699 RIMS1Q86UR5 1692 aaKnown RBP15.98■□□□□ 0.15
VARS2-210ENST00000490699 PPP4R3CPQ6ZMV5 832 aa15.97■□□□□ 0.15
VARS2-210ENST00000490699 E9PCH4 1651 aa15.97■□□□□ 0.15
VARS2-210ENST00000490699 CLSPNQ9HAW4 1339 aa15.96■□□□□ 0.15
VARS2-210ENST00000490699 RNF216Q9NWF9 866 aaPredicted RBP15.96■□□□□ 0.15
VARS2-210ENST00000490699 ZMYM3Q14202 1370 aa15.96■□□□□ 0.15
VARS2-210ENST00000490699 NPATQ14207 1427 aa15.94■□□□□ 0.14
VARS2-210ENST00000490699 SPHKAPQ2M3C7 1700 aa15.94■□□□□ 0.14
VARS2-210ENST00000490699 C3P01024 1663 aa15.92■□□□□ 0.14
VARS2-210ENST00000490699 PREX1Q8TCU6 1659 aa15.92■□□□□ 0.14
VARS2-210ENST00000490699 CCDC144AA2RUR9 1427 aa15.92■□□□□ 0.14
VARS2-210ENST00000490699 TRPM2O94759 1503 aa15.9■□□□□ 0.14
VARS2-210ENST00000490699 ERVK-7P63135 1459 aa15.9■□□□□ 0.14
VARS2-210ENST00000490699 CFAP65Q6ZU64 1925 aaKnown RBP15.9■□□□□ 0.14
VARS2-210ENST00000490699 SPATA31D1Q6ZQQ2 1576 aa15.88■□□□□ 0.13
VARS2-210ENST00000490699 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
VARS2-210ENST00000490699 PTPRMP28827 1452 aa15.88■□□□□ 0.13
VARS2-210ENST00000490699 TNRQ92752 1358 aa15.87■□□□□ 0.13
VARS2-210ENST00000490699 ANKRD30BQ9BXX2 1392 aa15.87■□□□□ 0.13
VARS2-210ENST00000490699 PTPRTO14522 1441 aa15.87■□□□□ 0.13
VARS2-210ENST00000490699 SLC52A1Q9NWF4 448 aa15.87■□□□□ 0.13
VARS2-210ENST00000490699 NOS1P29475 1434 aa15.86■□□□□ 0.13
VARS2-210ENST00000490699 STAG3Q9UJ98 1225 aa15.86■□□□□ 0.13
VARS2-210ENST00000490699 CEBPAP49715 358 aaPredicted RBP15.85■□□□□ 0.13
VARS2-210ENST00000490699 FBXO31Q5XUX0 539 aaPredicted RBP15.85■□□□□ 0.13
VARS2-210ENST00000490699 KIF1BO60333 1816 aa15.84■□□□□ 0.13
VARS2-210ENST00000490699 NLRP1Q9C000 1473 aa15.84■□□□□ 0.13
VARS2-210ENST00000490699 NEUROD1Q13562 356 aa15.83■□□□□ 0.12
VARS2-210ENST00000490699 SYNMO15061 1565 aa15.83■□□□□ 0.12
VARS2-210ENST00000490699 CHGAP10645 457 aaKnown RBP15.82■□□□□ 0.12
VARS2-210ENST00000490699 TONSLQ96HA7 1378 aa15.82■□□□□ 0.12
VARS2-210ENST00000490699 CLTCL1P53675 1640 aa15.82■□□□□ 0.12
VARS2-210ENST00000490699 PLA2R1Q13018 1463 aa15.81■□□□□ 0.12
VARS2-210ENST00000490699 PIK3C2BO00750 1634 aa15.8■□□□□ 0.12
VARS2-210ENST00000490699 KDM4FA0A1W2PPD8 638 aa15.8■□□□□ 0.12
VARS2-210ENST00000490699 SETD1BQ9UPS6 1966 aaKnown RBP15.8■□□□□ 0.12
VARS2-210ENST00000490699 MYO3AQ8NEV4 1616 aa15.79■□□□□ 0.12
VARS2-210ENST00000490699 UHRF1BP1Q6BDS2 1440 aa15.79■□□□□ 0.12
VARS2-210ENST00000490699 ZEB1P37275 1124 aaPredicted RBP15.79■□□□□ 0.12
VARS2-210ENST00000490699 ZNF326Q5BKZ1 582 aaKnown RBP15.78■□□□□ 0.12
VARS2-210ENST00000490699 SIN3AQ96ST3 1273 aa15.78■□□□□ 0.12
VARS2-210ENST00000490699 UGGT1Q9NYU2 1555 aa15.78■□□□□ 0.12
VARS2-210ENST00000490699 ADGRB3O60242 1522 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms