RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	RRP7BP	Q9NSQ0	103 aa		28.54	■■■□□ 2.16
C4A-256	ENST00000490663	ADGRL2	O95490	1459 aa		28.53	■■■□□ 2.16
C4A-256	ENST00000490663	ITGAE	P38570	1179 aa		28.52	■■■□□ 2.16
C4A-256	ENST00000490663	SETD1B	Q9UPS6	1966 aa	Known RBP	28.51	■■■□□ 2.16
C4A-256	ENST00000490663	RRBP1	Q9P2E9	1410 aa	Known RBP	28.51	■■■□□ 2.15
C4A-256	ENST00000490663	DEPDC5	O75140	1603 aa		28.51	■■■□□ 2.15
C4A-256	ENST00000490663	ZC3H13	Q5T200	1668 aa	Known RBP	28.5	■■■□□ 2.15
C4A-256	ENST00000490663	ESF1	Q9H501	851 aa	Known RBP	28.49	■■■□□ 2.15
C4A-256	ENST00000490663	ANKRD30A	Q9BXX3	1397 aa		28.49	■■■□□ 2.15
C4A-256	ENST00000490663	KDM5D	Q9BY66	1539 aa		28.48	■■■□□ 2.15
C4A-256	ENST00000490663	NCOA1	Q15788	1441 aa		28.48	■■■□□ 2.15
C4A-256	ENST00000490663	CNTLN	Q9NXG0	1405 aa		28.47	■■■□□ 2.15
C4A-256	ENST00000490663	CAMSAP1	Q5T5Y3	1602 aa		28.47	■■■□□ 2.15
C4A-256	ENST00000490663	ERBIN	Q96RT1	1412 aa		28.45	■■■□□ 2.15
C4A-256	ENST00000490663	PRDM15	P57071	1507 aa	Predicted RBP	28.43	■■■□□ 2.14
C4A-256	ENST00000490663	ABCC3	O15438	1527 aa		28.42	■■■□□ 2.14
C4A-256	ENST00000490663	LMTK3	Q96Q04	1460 aa		28.41	■■■□□ 2.14
C4A-256	ENST00000490663	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	28.41	■■■□□ 2.14
C4A-256	ENST00000490663	GCC2	Q8IWJ2	1684 aa		28.41	■■■□□ 2.14
C4A-256	ENST00000490663	MYO3A	Q8NEV4	1616 aa		28.4	■■■□□ 2.14
C4A-256	ENST00000490663	FAM135A	Q9P2D6	1515 aa		28.38	■■■□□ 2.13
C4A-256	ENST00000490663	ZMYM3	Q14202	1370 aa		28.38	■■■□□ 2.13
C4A-256	ENST00000490663	UNC13B	O14795	1591 aa		28.34	■■■□□ 2.13
C4A-256	ENST00000490663	ZNF142	P52746	1687 aa	Predicted RBP	28.33	■■■□□ 2.13
C4A-256	ENST00000490663	ANKRD50	Q9ULJ7	1429 aa		28.33	■■■□□ 2.13
C4A-256	ENST00000490663	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.32	■■■□□ 2.12
C4A-256	ENST00000490663	WASHC2C	Q9Y4E1	1318 aa		28.32	■■■□□ 2.12
C4A-256	ENST00000490663	ROCK1	Q13464	1354 aa		28.31	■■■□□ 2.12
C4A-256	ENST00000490663	VWDE	Q8N2E2	1590 aa		28.3	■■■□□ 2.12
C4A-256	ENST00000490663	PZP	P20742	1482 aa		28.28	■■■□□ 2.12
C4A-256	ENST00000490663	PPP6R1	Q9UPN7	881 aa		28.28	■■■□□ 2.12
C4A-256	ENST00000490663	HSPA2	P54652	639 aa		28.27	■■■□□ 2.12
C4A-256	ENST00000490663	UHRF1BP1	Q6BDS2	1440 aa		28.26	■■■□□ 2.12
C4A-256	ENST00000490663	NPAT	Q14207	1427 aa		28.26	■■■□□ 2.11
C4A-256	ENST00000490663	STRC	Q7RTU9	1775 aa		28.25	■■■□□ 2.11
C4A-256	ENST00000490663	TET3	O43151	1660 aa		28.24	■■■□□ 2.11
C4A-256	ENST00000490663	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	28.24	■■■□□ 2.11
C4A-256	ENST00000490663	IQGAP3	Q86VI3	1631 aa		28.23	■■■□□ 2.11
C4A-256	ENST00000490663	FBXO31	Q5XUX0	539 aa	Predicted RBP	28.23	■■■□□ 2.11
C4A-256	ENST00000490663		E9PCH4	1651 aa		28.21	■■■□□ 2.11
C4A-256	ENST00000490663	EFCAB6	Q5THR3	1501 aa		28.21	■■■□□ 2.11
C4A-256	ENST00000490663	KANK1	Q14678	1352 aa		28.2	■■■□□ 2.1
C4A-256	ENST00000490663	SPATA31D1	Q6ZQQ2	1576 aa		28.2	■■■□□ 2.1
C4A-256	ENST00000490663	LMTK2	Q8IWU2	1503 aa		28.18	■■■□□ 2.1
C4A-256	ENST00000490663	ERVK-7	P63135	1459 aa		28.18	■■■□□ 2.1
C4A-256	ENST00000490663	MYO5B	Q9ULV0	1848 aa		28.17	■■■□□ 2.1
C4A-256	ENST00000490663	NAIP	Q13075	1403 aa		28.17	■■■□□ 2.1
C4A-256	ENST00000490663	TNR	Q92752	1358 aa		28.15	■■■□□ 2.1
C4A-256	ENST00000490663	POLR1A	O95602	1720 aa	Predicted RBP	28.13	■■■□□ 2.09
C4A-256	ENST00000490663	UBR1	Q8IWV7	1749 aa		28.12	■■■□□ 2.09
C4A-256	ENST00000490663	SYNM	O15061	1565 aa		28.11	■■■□□ 2.09
C4A-256	ENST00000490663	PIK3C2B	O00750	1634 aa		28.1	■■■□□ 2.09
C4A-256	ENST00000490663	A2ML1	A8K2U0	1454 aa		28.09	■■■□□ 2.09
C4A-256	ENST00000490663	HFM1	A2PYH4	1435 aa		28.09	■■■□□ 2.09
C4A-256	ENST00000490663	ARHGAP31	Q2M1Z3	1444 aa		28.08	■■■□□ 2.09
C4A-256	ENST00000490663	SPHKAP	Q2M3C7	1700 aa		28.06	■■■□□ 2.08
C4A-256	ENST00000490663	NUP155	O75694	1391 aa		28.03	■■■□□ 2.08
C4A-256	ENST00000490663	UGGT1	Q9NYU2	1555 aa		28.02	■■■□□ 2.08
C4A-256	ENST00000490663	NLRP1	Q9C000	1473 aa		28.02	■■■□□ 2.08
C4A-256	ENST00000490663	RPRD2	Q5VT52	1461 aa	Known RBP	27.95	■■■□□ 2.07
C4A-256	ENST00000490663	NOS1	P29475	1434 aa		27.95	■■■□□ 2.07
C4A-256	ENST00000490663	NEURL4	Q96JN8	1562 aa		27.94	■■■□□ 2.06
C4A-256	ENST00000490663	KDM5A	P29375	1690 aa	Known RBP	27.94	■■■□□ 2.06
C4A-256	ENST00000490663	PLA2R1	Q13018	1463 aa		27.91	■■■□□ 2.06
C4A-256	ENST00000490663	TRIM52	Q96A61	297 aa		27.91	■■■□□ 2.06
C4A-256	ENST00000490663	NCKAP5L	Q9HCH0	1330 aa		27.91	■■■□□ 2.06
C4A-256	ENST00000490663	ADGRB3	O60242	1522 aa		27.9	■■■□□ 2.06
C4A-256	ENST00000490663	KIF1B	O60333	1816 aa		27.88	■■■□□ 2.05
C4A-256	ENST00000490663	TMEM131L	A2VDJ0	1609 aa		27.87	■■■□□ 2.05
C4A-256	ENST00000490663	SETD5	Q9C0A6	1442 aa		27.86	■■■□□ 2.05
C4A-256	ENST00000490663	CLTCL1	P53675	1640 aa		27.86	■■■□□ 2.05
C4A-256	ENST00000490663	IQGAP1	P46940	1657 aa		27.86	■■■□□ 2.05
C4A-256	ENST00000490663	IDI1	Q13907	227 aa		27.82	■■■□□ 2.04
C4A-256	ENST00000490663	RAB3GAP2	Q9H2M9	1393 aa		27.81	■■■□□ 2.04
C4A-256	ENST00000490663	SLIT1	O75093	1534 aa		27.78	■■■□□ 2.04
C4A-256	ENST00000490663	PTPRT	O14522	1441 aa		27.78	■■■□□ 2.04
C4A-256	ENST00000490663	THEMIS	Q8N1K5	641 aa	Predicted RBP	27.78	■■■□□ 2.04
C4A-256	ENST00000490663	TRPM2	O94759	1503 aa		27.77	■■■□□ 2.04
C4A-256	ENST00000490663	ARHGAP23	Q9P227	1491 aa		27.76	■■■□□ 2.04
C4A-256	ENST00000490663	STAG3	Q9UJ98	1225 aa		27.76	■■■□□ 2.03
C4A-256	ENST00000490663	PKD2	Q13563	968 aa		27.75	■■■□□ 2.03
C4A-256	ENST00000490663	SLC4A1AP	Q9BWU0	796 aa	Known RBP	27.75	■■■□□ 2.03
C4A-256	ENST00000490663	STRCP1	A6NGW2	1772 aa		27.73	■■■□□ 2.03
C4A-256	ENST00000490663	FOXD1	Q16676	465 aa		27.73	■■■□□ 2.03
C4A-256	ENST00000490663	SCAF11	Q99590	1463 aa	Known RBP	27.72	■■■□□ 2.03
C4A-256	ENST00000490663	CHGA	P10645	457 aa	Known RBP	27.71	■■■□□ 2.03
C4A-256	ENST00000490663	ANKLE2	Q86XL3	938 aa		27.7	■■■□□ 2.02
C4A-256	ENST00000490663	SLC52A1	Q9NWF4	448 aa		27.7	■■■□□ 2.02
C4A-256	ENST00000490663	DMRT2	Q9Y5R5	561 aa		27.7	■■■□□ 2.02
C4A-256	ENST00000490663	NPHP4	O75161	1426 aa	Predicted RBP	27.69	■■■□□ 2.02
C4A-256	ENST00000490663	TMEM2	Q9UHN6	1383 aa		27.68	■■■□□ 2.02
C4A-256	ENST00000490663	MED14	O60244	1454 aa		27.68	■■■□□ 2.02
C4A-256	ENST00000490663	LTK	P29376	864 aa		27.67	■■■□□ 2.02
C4A-256	ENST00000490663	SENP3	Q9H4L4	574 aa	Predicted RBP	27.67	■■■□□ 2.02
C4A-256	ENST00000490663	LTBP4	Q8N2S1	1624 aa		27.66	■■■□□ 2.02
C4A-256	ENST00000490663	MPHOSPH9	Q99550	1183 aa		27.65	■■■□□ 2.02
C4A-256	ENST00000490663	PPL	O60437	1756 aa		27.63	■■■□□ 2.01
C4A-256	ENST00000490663	TXNDC2	Q86VQ3	553 aa		27.63	■■■□□ 2.01
C4A-256	ENST00000490663	ZFYVE9	O95405	1425 aa		27.63	■■■□□ 2.01
C4A-256	ENST00000490663	RIMS2	Q9UQ26	1411 aa		27.63	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms