RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 CAMK2BQ13554 666 aa12.16□□□□□ -0.46
TM9SF3-206ENST00000490192 ANO8Q9HCE9 1232 aaPredicted RBP12.16□□□□□ -0.46
TM9SF3-206ENST00000490192 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
TM9SF3-206ENST00000490192 LSM11P83369 360 aaKnown RBP eCLIP12.15□□□□□ -0.46
TM9SF3-206ENST00000490192 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
TM9SF3-206ENST00000490192 DPYSL4O14531 572 aa12.11□□□□□ -0.47
TM9SF3-206ENST00000490192 PTGER2P43116 358 aa12.1□□□□□ -0.47
TM9SF3-206ENST00000490192 FOSBP53539 338 aa12.09□□□□□ -0.47
TM9SF3-206ENST00000490192 JPH4Q96JJ6 628 aa12.09□□□□□ -0.47
TM9SF3-206ENST00000490192 POTEEQ6S8J3 1075 aa12.08□□□□□ -0.48
TM9SF3-206ENST00000490192 ZDHHC16Q969W1 377 aa12.08□□□□□ -0.48
TM9SF3-206ENST00000490192 KCNK17Q96T54 332 aa12.08□□□□□ -0.48
TM9SF3-206ENST00000490192 ARIH1Q9Y4X5 557 aaPredicted RBP12.08□□□□□ -0.48
TM9SF3-206ENST00000490192 AK7Q96M32 723 aa12.07□□□□□ -0.48
TM9SF3-206ENST00000490192 GPBP1L1Q9HC44 474 aaPredicted RBP12.07□□□□□ -0.48
TM9SF3-206ENST00000490192 PSEN2P49810 448 aa12.06□□□□□ -0.48
TM9SF3-206ENST00000490192 MYT1LQ9UL68 1186 aa12.06□□□□□ -0.48
TM9SF3-206ENST00000490192 PTPREP23469 700 aa12.05□□□□□ -0.48
TM9SF3-206ENST00000490192 STAC3Q96MF2 364 aa12.05□□□□□ -0.48
TM9SF3-206ENST00000490192 BCL2L12Q9HB09 334 aa12.05□□□□□ -0.48
TM9SF3-206ENST00000490192 SPDYE16A6NNV3 312 aaPredicted RBP12.03□□□□□ -0.48
TM9SF3-206ENST00000490192 TK2O00142 265 aa12.02□□□□□ -0.49
TM9SF3-206ENST00000490192 PHF14O94880 888 aa12.02□□□□□ -0.49
TM9SF3-206ENST00000490192 RBM26Q5T8P6 1007 aaKnown RBP12.02□□□□□ -0.49
TM9SF3-206ENST00000490192 ADGRD1Q6QNK2 874 aa12.02□□□□□ -0.49
TM9SF3-206ENST00000490192 GPIHBP1Q8IV16 184 aa12.02□□□□□ -0.49
TM9SF3-206ENST00000490192 KRI1Q8N9T8 703 aaKnown RBP12.02□□□□□ -0.49
TM9SF3-206ENST00000490192 IL27Q8NEV9 243 aa12.02□□□□□ -0.49
TM9SF3-206ENST00000490192 FBXW7Q969H0 707 aa12.02□□□□□ -0.49
TM9SF3-206ENST00000490192 DMRTA1Q5VZB9 504 aa12.01□□□□□ -0.49
TM9SF3-206ENST00000490192 TYW1BQ6NUM6 668 aa12.01□□□□□ -0.49
TM9SF3-206ENST00000490192 RNF166Q96A37 237 aaPredicted RBP12.01□□□□□ -0.49
TM9SF3-206ENST00000490192 PCDHGA10Q9Y5H3 936 aa12.01□□□□□ -0.49
TM9SF3-206ENST00000490192 EPAS1Q99814 870 aa11.99□□□□□ -0.49
TM9SF3-206ENST00000490192 ADAM33Q9BZ11 813 aa11.99□□□□□ -0.49
TM9SF3-206ENST00000490192 ZMYND15Q9H091 742 aa11.99□□□□□ -0.49
TM9SF3-206ENST00000490192 MLLT3P42568 568 aaPredicted RBP11.98□□□□□ -0.49
TM9SF3-206ENST00000490192 DDX12PQ92771 950 aa11.98□□□□□ -0.49
TM9SF3-206ENST00000490192 KDM4CQ9H3R0 1056 aa11.98□□□□□ -0.49
TM9SF3-206ENST00000490192 UBTFP17480 764 aaKnown RBP11.97□□□□□ -0.49
TM9SF3-206ENST00000490192 PDIA6Q15084 440 aa11.97□□□□□ -0.49
TM9SF3-206ENST00000490192 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
TM9SF3-206ENST00000490192 RSPH6AQ9H0K4 717 aa11.94□□□□□ -0.5
TM9SF3-206ENST00000490192 TRIM66O15016 1216 aa11.93□□□□□ -0.5
TM9SF3-206ENST00000490192 VPS9D1Q9Y2B5 631 aa11.93□□□□□ -0.5
TM9SF3-206ENST00000490192 PDE4DQ08499 809 aa11.92□□□□□ -0.5
TM9SF3-206ENST00000490192 RBM33Q96EV2 1170 aaKnown RBP11.92□□□□□ -0.5
TM9SF3-206ENST00000490192 SLC4A5Q9BY07 1137 aa11.92□□□□□ -0.5
TM9SF3-206ENST00000490192 GRXCR2A6NFK2 248 aa11.9□□□□□ -0.5
TM9SF3-206ENST00000490192 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
TM9SF3-206ENST00000490192 HRO43593 1189 aa11.89□□□□□ -0.51
TM9SF3-206ENST00000490192 C6orf132Q5T0Z8 1188 aa11.89□□□□□ -0.51
TM9SF3-206ENST00000490192 ZBED2Q9BTP6 218 aa11.89□□□□□ -0.51
TM9SF3-206ENST00000490192 MAP3K7O43318 606 aa11.87□□□□□ -0.51
TM9SF3-206ENST00000490192 GOLGA8CPA6NN73 597 aa11.86□□□□□ -0.51
TM9SF3-206ENST00000490192 NBPF3Q9H094 633 aa11.85□□□□□ -0.51
TM9SF3-206ENST00000490192 EN1Q05925 392 aaPredicted RBP11.84□□□□□ -0.51
TM9SF3-206ENST00000490192 MRPL50Q8N5N7 158 aaKnown RBP11.84□□□□□ -0.51
TM9SF3-206ENST00000490192 COL9A1P20849 921 aa11.83□□□□□ -0.52
TM9SF3-206ENST00000490192 KCTD12Q96CX2 325 aaKnown RBP11.81□□□□□ -0.52
TM9SF3-206ENST00000490192 FAM117AQ9C073 453 aa11.81□□□□□ -0.52
TM9SF3-206ENST00000490192 HCSTQ9UBK5 93 aa11.81□□□□□ -0.52
TM9SF3-206ENST00000490192 RABGEF1Q9UJ41 708 aa11.81□□□□□ -0.52
TM9SF3-206ENST00000490192 PROX2Q3B8N5 592 aa11.8□□□□□ -0.52
TM9SF3-206ENST00000490192 ARID3AQ99856 593 aa11.8□□□□□ -0.52
TM9SF3-206ENST00000490192 BHMG1C9JSJ3 638 aaPredicted RBP11.79□□□□□ -0.52
TM9SF3-206ENST00000490192 TRIM26Q12899 539 aaPredicted RBP11.79□□□□□ -0.52
TM9SF3-206ENST00000490192 ONECUT3O60422 494 aaPredicted RBP11.78□□□□□ -0.52
TM9SF3-206ENST00000490192 GPR37O15354 613 aa11.77□□□□□ -0.53
TM9SF3-206ENST00000490192 TSR1Q2NL82 804 aaKnown RBP11.77□□□□□ -0.53
TM9SF3-206ENST00000490192 CERKQ8TCT0 537 aa11.77□□□□□ -0.53
TM9SF3-206ENST00000490192 KIAA1468Q9P260 1216 aa11.76□□□□□ -0.53
TM9SF3-206ENST00000490192 OSBPP22059 807 aa11.75□□□□□ -0.53
TM9SF3-206ENST00000490192 PACS2Q86VP3 889 aa11.75□□□□□ -0.53
TM9SF3-206ENST00000490192 WNT2BQ93097 391 aa11.75□□□□□ -0.53
TM9SF3-206ENST00000490192 C1orf115Q9H7X2 142 aa11.75□□□□□ -0.53
TM9SF3-206ENST00000490192 TRIM6-TRIM34B2RNG4 842 aa11.74□□□□□ -0.53
TM9SF3-206ENST00000490192 PLEKHG3A1L390 1219 aa11.73□□□□□ -0.53
TM9SF3-206ENST00000490192 MINK1Q8N4C8 1332 aaPredicted RBP11.73□□□□□ -0.53
TM9SF3-206ENST00000490192 LAPTM4BQ86VI4 370 aa11.72□□□□□ -0.53
TM9SF3-206ENST00000490192 DDRGK1Q96HY6 314 aa11.72□□□□□ -0.53
TM9SF3-206ENST00000490192 RANGAP1P46060 587 aaPredicted RBP11.71□□□□□ -0.53
TM9SF3-206ENST00000490192 PTPN5P54829 565 aa11.71□□□□□ -0.53
TM9SF3-206ENST00000490192 ANKK1Q8NFD2 765 aa11.7□□□□□ -0.54
TM9SF3-206ENST00000490192 CCDC102AQ96A19 550 aa11.7□□□□□ -0.54
TM9SF3-206ENST00000490192 ARID3CA6NKF2 412 aa11.69□□□□□ -0.54
TM9SF3-206ENST00000490192 HRCP23327 699 aa11.69□□□□□ -0.54
TM9SF3-206ENST00000490192 PRSS12P56730 875 aa11.69□□□□□ -0.54
TM9SF3-206ENST00000490192 MAP2K5Q13163 448 aa11.69□□□□□ -0.54
TM9SF3-206ENST00000490192 CDCA7LQ96GN5 454 aa11.69□□□□□ -0.54
TM9SF3-206ENST00000490192 NUTM2FA1L443 756 aa11.68□□□□□ -0.54
TM9SF3-206ENST00000490192 PRIM1P49642 420 aaKnown RBP11.68□□□□□ -0.54
TM9SF3-206ENST00000490192 APBB1O00213 710 aa11.67□□□□□ -0.54
TM9SF3-206ENST00000490192 FLIIQ13045 1269 aa11.67□□□□□ -0.54
TM9SF3-206ENST00000490192 AMHR2Q16671 573 aa11.67□□□□□ -0.54
TM9SF3-206ENST00000490192 THSD4Q6ZMP0 1018 aa11.67□□□□□ -0.54
TM9SF3-206ENST00000490192 PARP9Q8IXQ6 854 aa11.67□□□□□ -0.54
TM9SF3-206ENST00000490192 SEPT9Q9UHD8 586 aaPredicted RBP11.67□□□□□ -0.54
TM9SF3-206ENST00000490192 IRF6O14896 467 aa11.66□□□□□ -0.54
TM9SF3-206ENST00000490192 TSKSQ9UJT2 592 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms