RNA–Protein interactions for RNA: ENST00000490179.2

TSC1-206, Transcript of TSC complex subunit 1, humanhuman

TSL 3

Gene TSC1, Length 681 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-206ENST00000490179 DEPDC5O75140 1603 aa22.02■■□□□ 1.11
TSC1-206ENST00000490179 FER1L4A9Z1Z3 1794 aa22.02■■□□□ 1.11
TSC1-206ENST00000490179 SETD5Q9C0A6 1442 aa22■■□□□ 1.11
TSC1-206ENST00000490179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22■■□□□ 1.112e-10■□□□□ 10.5
TSC1-206ENST00000490179 MROH1Q8NDA8 1641 aa21.99■■□□□ 1.11
TSC1-206ENST00000490179 MADDQ8WXG6 1647 aa21.99■■□□□ 1.11
TSC1-206ENST00000490179 PPP6R1Q9UPN7 881 aa21.99■■□□□ 1.11
TSC1-206ENST00000490179 PRDM15P57071 1507 aaPredicted RBP21.99■■□□□ 1.11
TSC1-206ENST00000490179 UNC13BO14795 1591 aa21.99■■□□□ 1.11
TSC1-206ENST00000490179 KANK1Q14678 1352 aa21.99■■□□□ 1.11
TSC1-206ENST00000490179 FAM135AQ9P2D6 1515 aa21.97■■□□□ 1.11
TSC1-206ENST00000490179 KDM5DQ9BY66 1539 aa21.96■■□□□ 1.11
TSC1-206ENST00000490179 CLTCQ00610 1675 aaKnown RBP21.96■■□□□ 1.11
TSC1-206ENST00000490179 RIMS1Q86UR5 1692 aaKnown RBP21.96■■□□□ 1.11
TSC1-206ENST00000490179 WASHC2CQ9Y4E1 1318 aa21.96■■□□□ 1.11
TSC1-206ENST00000490179 ZC3H13Q5T200 1668 aaKnown RBP21.95■■□□□ 1.1
TSC1-206ENST00000490179 CNTLNQ9NXG0 1405 aa21.95■■□□□ 1.1
TSC1-206ENST00000490179 KDM4FA0A1W2PPD8 638 aa21.94■■□□□ 1.1
TSC1-206ENST00000490179 CEP152O94986 1710 aa21.93■■□□□ 1.1
TSC1-206ENST00000490179 RAB3GAP2Q9H2M9 1393 aa21.93■■□□□ 1.1
TSC1-206ENST00000490179 MROH2AA6NES4 1674 aa21.91■■□□□ 1.1
TSC1-206ENST00000490179 ABCC3O15438 1527 aa21.91■■□□□ 1.1
TSC1-206ENST00000490179 NUP155O75694 1391 aa21.91■■□□□ 1.1
TSC1-206ENST00000490179 ACIN1Q9UKV3 1341 aaKnown RBP21.91■■□□□ 1.1
TSC1-206ENST00000490179 TRIM52Q96A61 297 aa21.91■■□□□ 1.1
TSC1-206ENST00000490179 VWDEQ8N2E2 1590 aa21.91■■□□□ 1.1
TSC1-206ENST00000490179 IQGAP3Q86VI3 1631 aa21.89■■□□□ 1.09
TSC1-206ENST00000490179 PCGF6Q9BYE7 350 aa21.89■■□□□ 1.09
TSC1-206ENST00000490179 CAMSAP1Q5T5Y3 1602 aa21.88■■□□□ 1.09
TSC1-206ENST00000490179 LMTK2Q8IWU2 1503 aa21.87■■□□□ 1.09
TSC1-206ENST00000490179 PTPRMP28827 1452 aa21.86■■□□□ 1.09
TSC1-206ENST00000490179 ZMYM3Q14202 1370 aa21.86■■□□□ 1.09
TSC1-206ENST00000490179 C3P01024 1663 aa21.85■■□□□ 1.09
TSC1-206ENST00000490179 HRCP23327 699 aa21.85■■□□□ 1.09
TSC1-206ENST00000490179 PLPPR3Q6T4P5 718 aa21.84■■□□□ 1.09
TSC1-206ENST00000490179 TET3O43151 1660 aa21.84■■□□□ 1.09
TSC1-206ENST00000490179 EFCAB6Q5THR3 1501 aa21.81■■□□□ 1.08
TSC1-206ENST00000490179 PZPP20742 1482 aa21.8■■□□□ 1.08
TSC1-206ENST00000490179 CEBPAP49715 358 aaPredicted RBP21.8■■□□□ 1.08
TSC1-206ENST00000490179 SLC4A1APQ9BWU0 796 aaKnown RBP21.79■■□□□ 1.08
TSC1-206ENST00000490179 ARHGAP31Q2M1Z3 1444 aa21.79■■□□□ 1.08
TSC1-206ENST00000490179 NPATQ14207 1427 aa21.77■■□□□ 1.08
TSC1-206ENST00000490179 E9PCH4 1651 aa21.76■■□□□ 1.07
TSC1-206ENST00000490179 RPRD2Q5VT52 1461 aaKnown RBP21.76■■□□□ 1.07
TSC1-206ENST00000490179 MPHOSPH9Q99550 1183 aa21.75■■□□□ 1.07
TSC1-206ENST00000490179 PREX1Q8TCU6 1659 aa21.74■■□□□ 1.07
TSC1-206ENST00000490179 CFAP65Q6ZU64 1925 aaKnown RBP21.73■■□□□ 1.07
TSC1-206ENST00000490179 PKD2Q13563 968 aa21.73■■□□□ 1.07
TSC1-206ENST00000490179 FBXO31Q5XUX0 539 aaPredicted RBP21.73■■□□□ 1.07
TSC1-206ENST00000490179 ERVK-7P63135 1459 aa21.71■■□□□ 1.07
TSC1-206ENST00000490179 SPATA31D1Q6ZQQ2 1576 aa21.71■■□□□ 1.07
TSC1-206ENST00000490179 AEBP2Q6ZN18 517 aaPredicted RBP21.69■■□□□ 1.06
TSC1-206ENST00000490179 TNRQ92752 1358 aa21.69■■□□□ 1.06
TSC1-206ENST00000490179 SPHKAPQ2M3C7 1700 aa21.66■■□□□ 1.06
TSC1-206ENST00000490179 NOS1P29475 1434 aa21.66■■□□□ 1.06
TSC1-206ENST00000490179 SETD1BQ9UPS6 1966 aaKnown RBP21.65■■□□□ 1.06
TSC1-206ENST00000490179 FOXD1Q16676 465 aa21.64■■□□□ 1.05
TSC1-206ENST00000490179 MYO3AQ8NEV4 1616 aa21.64■■□□□ 1.05
TSC1-206ENST00000490179 SYNMO15061 1565 aa21.64■■□□□ 1.05
TSC1-206ENST00000490179 PTPRTO14522 1441 aa21.62■■□□□ 1.05
TSC1-206ENST00000490179 UHRF1BP1Q6BDS2 1440 aa21.62■■□□□ 1.05
TSC1-206ENST00000490179 NLRP1Q9C000 1473 aa21.61■■□□□ 1.05
TSC1-206ENST00000490179 TRPM2O94759 1503 aa21.6■■□□□ 1.05
TSC1-206ENST00000490179 SLC52A1Q9NWF4 448 aa21.58■■□□□ 1.05
TSC1-206ENST00000490179 ZNF142P52746 1687 aaPredicted RBP21.57■■□□□ 1.04
TSC1-206ENST00000490179 PIK3C2BO00750 1634 aa21.57■■□□□ 1.04
TSC1-206ENST00000490179 DHX57Q6P158 1386 aaKnown RBP21.57■■□□□ 1.04
TSC1-206ENST00000490179 PLA2R1Q13018 1463 aa21.57■■□□□ 1.04
TSC1-206ENST00000490179 UGGT1Q9NYU2 1555 aa21.57■■□□□ 1.04
TSC1-206ENST00000490179 CEP170BQ9Y4F5 1589 aaPredicted RBP21.57■■□□□ 1.04
TSC1-206ENST00000490179 A2ML1A8K2U0 1454 aa21.56■■□□□ 1.04
TSC1-206ENST00000490179 IDI1Q13907 227 aa21.55■■□□□ 1.04
TSC1-206ENST00000490179 CLTCL1P53675 1640 aa21.54■■□□□ 1.04
TSC1-206ENST00000490179 CCDC144AA2RUR9 1427 aa21.54■■□□□ 1.04
TSC1-206ENST00000490179 STAG3Q9UJ98 1225 aa21.53■■□□□ 1.04
TSC1-206ENST00000490179 LMTK3Q96Q04 1460 aa21.52■■□□□ 1.04
TSC1-206ENST00000490179 ANKRD30BQ9BXX2 1392 aa21.51■■□□□ 1.03
TSC1-206ENST00000490179 CHGAP10645 457 aaKnown RBP21.51■■□□□ 1.03
TSC1-206ENST00000490179 UBR1Q8IWV7 1749 aa21.51■■□□□ 1.03
TSC1-206ENST00000490179 KDM5AP29375 1690 aaKnown RBP21.5■■□□□ 1.03
TSC1-206ENST00000490179 ADGRB3O60242 1522 aa21.5■■□□□ 1.03
TSC1-206ENST00000490179 KIF1BO60333 1816 aa21.5■■□□□ 1.03
TSC1-206ENST00000490179 THEMISQ8N1K5 641 aaPredicted RBP21.48■■□□□ 1.03
TSC1-206ENST00000490179 TMEM131LA2VDJ0 1609 aa21.47■■□□□ 1.03
TSC1-206ENST00000490179 MYO5BQ9ULV0 1848 aa21.45■■□□□ 1.02
TSC1-206ENST00000490179 HSPA2P54652 639 aa21.44■■□□□ 1.02
TSC1-206ENST00000490179 CCER1Q8TC90 406 aaPredicted RBP21.42■■□□□ 1.02
TSC1-206ENST00000490179 ZNF326Q5BKZ1 582 aaKnown RBP21.41■■□□□ 1.02
TSC1-206ENST00000490179 TMEM2Q9UHN6 1383 aa21.39■■□□□ 1.02
TSC1-206ENST00000490179 SLIT1O75093 1534 aa21.39■■□□□ 1.01
TSC1-206ENST00000490179 NEURL4Q96JN8 1562 aa21.38■■□□□ 1.01
TSC1-206ENST00000490179 SPATA31E1Q6ZUB1 1445 aa21.38■■□□□ 1.01
TSC1-206ENST00000490179 SIN3AQ96ST3 1273 aa21.37■■□□□ 1.01
TSC1-206ENST00000490179 ARHGAP23Q9P227 1491 aa21.37■■□□□ 1.01
TSC1-206ENST00000490179 HDGFP51858 240 aaKnown RBP21.36■■□□□ 1.01
TSC1-206ENST00000490179 NEUROD1Q13562 356 aa21.36■■□□□ 1.01
TSC1-206ENST00000490179 RGL3Q3MIN7 710 aa21.36■■□□□ 1.01
TSC1-206ENST00000490179 ANKLE2Q86XL3 938 aa21.36■■□□□ 1.01
TSC1-206ENST00000490179 EID1Q9Y6B2 187 aa21.36■■□□□ 1.01
TSC1-206ENST00000490179 RIMS2Q9UQ26 1411 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms