RNA–Protein interactions for RNA: ENST00000490117.5

CPA4-208, Transcript of carboxypeptidase A4, humanhuman

TSL 2

Gene CPA4, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-208ENST00000490117 DEPDC5O75140 1603 aa11.14□□□□□ -0.63
CPA4-208ENST00000490117 ANKRD50Q9ULJ7 1429 aa11.14□□□□□ -0.63
CPA4-208ENST00000490117 BCORL1Q5H9F3 1711 aa11.14□□□□□ -0.63
CPA4-208ENST00000490117 MROH1Q8NDA8 1641 aa11.13□□□□□ -0.63
CPA4-208ENST00000490117 RNF17Q9BXT8 1623 aaKnown RBP11.13□□□□□ -0.63
CPA4-208ENST00000490117 CFAP65Q6ZU64 1925 aaKnown RBP11.12□□□□□ -0.63
CPA4-208ENST00000490117 MAGI2Q86UL8 1455 aa11.12□□□□□ -0.63
CPA4-208ENST00000490117 ERBINQ96RT1 1412 aa11.11□□□□□ -0.63
CPA4-208ENST00000490117 REREQ9P2R6 1566 aa11.11□□□□□ -0.63
CPA4-208ENST00000490117 IQGAP3Q86VI3 1631 aa11.1□□□□□ -0.63
CPA4-208ENST00000490117 ATP10AO60312 1499 aa11.1□□□□□ -0.63
CPA4-208ENST00000490117 CLTCQ00610 1675 aaKnown RBP11.09□□□□□ -0.63
CPA4-208ENST00000490117 DHX29Q7Z478 1369 aaKnown RBP11.09□□□□□ -0.63
CPA4-208ENST00000490117 PRDM15P57071 1507 aaPredicted RBP11.09□□□□□ -0.63
CPA4-208ENST00000490117 PZPP20742 1482 aa11.08□□□□□ -0.64
CPA4-208ENST00000490117 TRIM52Q96A61 297 aa11.08□□□□□ -0.64
CPA4-208ENST00000490117 KDM5DQ9BY66 1539 aa11.08□□□□□ -0.64
CPA4-208ENST00000490117 FER1L4A9Z1Z3 1794 aa11.08□□□□□ -0.64
CPA4-208ENST00000490117 CAMSAP1Q5T5Y3 1602 aa11.07□□□□□ -0.64
CPA4-208ENST00000490117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.64
CPA4-208ENST00000490117 E9PCH4 1651 aa11.07□□□□□ -0.64
CPA4-208ENST00000490117 FAM135AQ9P2D6 1515 aa11.06□□□□□ -0.64
CPA4-208ENST00000490117 TET3O43151 1660 aa11.06□□□□□ -0.64
CPA4-208ENST00000490117 ZC3H13Q5T200 1668 aaKnown RBP11.06□□□□□ -0.64
CPA4-208ENST00000490117 KIF3BO15066 747 aa11.06□□□□□ -0.64
CPA4-208ENST00000490117 DHX57Q6P158 1386 aaKnown RBP11.05□□□□□ -0.64
CPA4-208ENST00000490117 AGLP35573 1532 aa11.05□□□□□ -0.64
CPA4-208ENST00000490117 VWDEQ8N2E2 1590 aa11.05□□□□□ -0.64
CPA4-208ENST00000490117 SPHKAPQ2M3C7 1700 aa11.04□□□□□ -0.64
CPA4-208ENST00000490117 MLECQ14165 292 aa11.03□□□□□ -0.64
CPA4-208ENST00000490117 RIMS1Q86UR5 1692 aaKnown RBP11.03□□□□□ -0.64
CPA4-208ENST00000490117 NUP155O75694 1391 aa11.03□□□□□ -0.64
CPA4-208ENST00000490117 GGT6Q6P531 493 aa11.02□□□□□ -0.65
CPA4-208ENST00000490117 ABCC3O15438 1527 aa11.02□□□□□ -0.65
CPA4-208ENST00000490117 ARID4BQ4LE39 1312 aaPredicted RBP11.02□□□□□ -0.65
CPA4-208ENST00000490117 MADDQ8WXG6 1647 aa11.02□□□□□ -0.65
CPA4-208ENST00000490117 EFCAB6Q5THR3 1501 aa11.01□□□□□ -0.65
CPA4-208ENST00000490117 CCER1Q8TC90 406 aaPredicted RBP11□□□□□ -0.65
CPA4-208ENST00000490117 PREX1Q8TCU6 1659 aa11□□□□□ -0.65
CPA4-208ENST00000490117 C3P01024 1663 aa10.99□□□□□ -0.65
CPA4-208ENST00000490117 HRCP23327 699 aa10.99□□□□□ -0.65
CPA4-208ENST00000490117 KANK1Q14678 1352 aa10.99□□□□□ -0.65
CPA4-208ENST00000490117 MROH2AA6NES4 1674 aa10.98□□□□□ -0.65
CPA4-208ENST00000490117 ADAMTSL3P82987 1691 aa10.98□□□□□ -0.65
CPA4-208ENST00000490117 MYO5BQ9ULV0 1848 aa10.98□□□□□ -0.65
CPA4-208ENST00000490117 MPHOSPH9Q99550 1183 aa10.98□□□□□ -0.65
CPA4-208ENST00000490117 SLC4A1APQ9BWU0 796 aaKnown RBP10.98□□□□□ -0.65
CPA4-208ENST00000490117 LMTK2Q8IWU2 1503 aa10.98□□□□□ -0.65
CPA4-208ENST00000490117 CLTCL1P53675 1640 aa10.96□□□□□ -0.65
CPA4-208ENST00000490117 PKD2Q13563 968 aa10.96□□□□□ -0.65
CPA4-208ENST00000490117 KIF1BO60333 1816 aa10.95□□□□□ -0.66
CPA4-208ENST00000490117 UGGT1Q9NYU2 1555 aa10.95□□□□□ -0.66
CPA4-208ENST00000490117 WASHC2CQ9Y4E1 1318 aa10.94□□□□□ -0.66
CPA4-208ENST00000490117 SYNMO15061 1565 aa10.94□□□□□ -0.66
CPA4-208ENST00000490117 NPATQ14207 1427 aa10.92□□□□□ -0.66
CPA4-208ENST00000490117 SIN3AQ96ST3 1273 aa10.92□□□□□ -0.66
CPA4-208ENST00000490117 TRPM2O94759 1503 aa10.92□□□□□ -0.66
CPA4-208ENST00000490117 PLA2R1Q13018 1463 aa10.91□□□□□ -0.66
CPA4-208ENST00000490117 ACIN1Q9UKV3 1341 aaKnown RBP10.9□□□□□ -0.66
CPA4-208ENST00000490117 PIK3C2BO00750 1634 aa10.9□□□□□ -0.66
CPA4-208ENST00000490117 ANKRD30BQ9BXX2 1392 aa10.9□□□□□ -0.67
CPA4-208ENST00000490117 ERVK-7P63135 1459 aa10.89□□□□□ -0.67
CPA4-208ENST00000490117 NEUROD1Q13562 356 aa10.89□□□□□ -0.67
CPA4-208ENST00000490117 ESF1Q9H501 851 aaKnown RBP10.89□□□□□ -0.67
CPA4-208ENST00000490117 SPATA31D1Q6ZQQ2 1576 aa10.89□□□□□ -0.67
CPA4-208ENST00000490117 RPRD2Q5VT52 1461 aaKnown RBP10.88□□□□□ -0.67
CPA4-208ENST00000490117 IFT172Q9UG01 1749 aa10.88□□□□□ -0.67
CPA4-208ENST00000490117 MYO3AQ8NEV4 1616 aa10.87□□□□□ -0.67
CPA4-208ENST00000490117 ARHGAP31Q2M1Z3 1444 aa10.87□□□□□ -0.67
CPA4-208ENST00000490117 CNTLNQ9NXG0 1405 aa10.87□□□□□ -0.67
CPA4-208ENST00000490117 CEBPAP49715 358 aaPredicted RBP10.87□□□□□ -0.67
CPA4-208ENST00000490117 FBXO31Q5XUX0 539 aaPredicted RBP10.87□□□□□ -0.67
CPA4-208ENST00000490117 PTPRTO14522 1441 aa10.86□□□□□ -0.67
CPA4-208ENST00000490117 NOS1P29475 1434 aa10.86□□□□□ -0.67
CPA4-208ENST00000490117 ZMYM3Q14202 1370 aa10.86□□□□□ -0.67
CPA4-208ENST00000490117 PPLO60437 1756 aa10.85□□□□□ -0.67
CPA4-208ENST00000490117 CCDC144AA2RUR9 1427 aa10.85□□□□□ -0.67
CPA4-208ENST00000490117 UBR1Q8IWV7 1749 aa10.84□□□□□ -0.67
CPA4-208ENST00000490117 TMEM131LA2VDJ0 1609 aa10.84□□□□□ -0.67
CPA4-208ENST00000490117 ADGRB3O60242 1522 aa10.84□□□□□ -0.67
CPA4-208ENST00000490117 CLSPNQ9HAW4 1339 aa10.83□□□□□ -0.68
CPA4-208ENST00000490117 PTPRMP28827 1452 aa10.82□□□□□ -0.68
CPA4-208ENST00000490117 ZNF142P52746 1687 aaPredicted RBP10.82□□□□□ -0.68
CPA4-208ENST00000490117 TNRQ92752 1358 aa10.81□□□□□ -0.68
CPA4-208ENST00000490117 TONSLQ96HA7 1378 aa10.81□□□□□ -0.68
CPA4-208ENST00000490117 CHGAP10645 457 aaKnown RBP10.8□□□□□ -0.68
CPA4-208ENST00000490117 SPATA31E1Q6ZUB1 1445 aa10.79□□□□□ -0.68
CPA4-208ENST00000490117 SETD1BQ9UPS6 1966 aaKnown RBP10.79□□□□□ -0.68
CPA4-208ENST00000490117 KDM5AP29375 1690 aaKnown RBP10.79□□□□□ -0.68
CPA4-208ENST00000490117 CEP170BQ9Y4F5 1589 aaPredicted RBP10.78□□□□□ -0.68
CPA4-208ENST00000490117 KDM4FA0A1W2PPD8 638 aa10.78□□□□□ -0.68
CPA4-208ENST00000490117 RGL3Q3MIN7 710 aa10.78□□□□□ -0.68
CPA4-208ENST00000490117 NEXMIFQ5QGS0 1516 aa10.78□□□□□ -0.68
CPA4-208ENST00000490117 IDI1Q13907 227 aa10.77□□□□□ -0.69
CPA4-208ENST00000490117 NEURL4Q96JN8 1562 aa10.77□□□□□ -0.69
CPA4-208ENST00000490117 L3MBTL2Q969R5 705 aa10.76□□□□□ -0.69
CPA4-208ENST00000490117 TRPM1Q7Z4N2 1603 aa10.76□□□□□ -0.69
CPA4-208ENST00000490117 IQGAP1P46940 1657 aa10.76□□□□□ -0.69
CPA4-208ENST00000490117 POLR1AO95602 1720 aaPredicted RBP10.75□□□□□ -0.69
CPA4-208ENST00000490117 A2ML1A8K2U0 1454 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms