RNA–Protein interactions for RNA: ENST00000490008.1

COMMD2-206, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-206ENST00000490008 CEBPAP49715 358 aaPredicted RBP21.33■■□□□ 1.01
COMMD2-206ENST00000490008 BCORL1Q5H9F3 1711 aa21.32■■□□□ 1
COMMD2-206ENST00000490008 NAIPQ13075 1403 aa21.31■■□□□ 1
COMMD2-206ENST00000490008 CNTLNQ9NXG0 1405 aa21.31■■□□□ 1
COMMD2-206ENST00000490008 SIGLEC1Q9BZZ2 1709 aa21.31■■□□□ 1
COMMD2-206ENST00000490008 ZMYM3Q14202 1370 aa21.31■■□□□ 1
COMMD2-206ENST00000490008 HFM1A2PYH4 1435 aa21.3■■□□□ 1
COMMD2-206ENST00000490008 ACIN1Q9UKV3 1341 aaKnown RBP21.29■■□□□ 1
COMMD2-206ENST00000490008 NUP155O75694 1391 aa21.29■■□□□ 1
COMMD2-206ENST00000490008 SETD5Q9C0A6 1442 aa21.28■■□□□ 1
COMMD2-206ENST00000490008 ADAMTSL3P82987 1691 aa21.26■□□□□ 0.99
COMMD2-206ENST00000490008 PTPRMP28827 1452 aa21.26■□□□□ 0.99
COMMD2-206ENST00000490008 EIF2AK4Q9P2K8 1649 aaKnown RBP21.25■□□□□ 0.99
COMMD2-206ENST00000490008 MADDQ8WXG6 1647 aa21.23■□□□□ 0.99
COMMD2-206ENST00000490008 HRCP23327 699 aa21.21■□□□□ 0.99
COMMD2-206ENST00000490008 FBXO31Q5XUX0 539 aaPredicted RBP21.21■□□□□ 0.99
COMMD2-206ENST00000490008 SLC4A1APQ9BWU0 796 aaKnown RBP21.2■□□□□ 0.98
COMMD2-206ENST00000490008 KDM5DQ9BY66 1539 aa21.19■□□□□ 0.98
COMMD2-206ENST00000490008 RIMS1Q86UR5 1692 aaKnown RBP21.18■□□□□ 0.98
COMMD2-206ENST00000490008 PCGF6Q9BYE7 350 aa21.17■□□□□ 0.98
COMMD2-206ENST00000490008 RAB3GAP2Q9H2M9 1393 aa21.17■□□□□ 0.98
COMMD2-206ENST00000490008 RNF17Q9BXT8 1623 aaKnown RBP21.17■□□□□ 0.98
COMMD2-206ENST00000490008 FER1L4A9Z1Z3 1794 aa21.17■□□□□ 0.98
COMMD2-206ENST00000490008 ABCC3O15438 1527 aa21.15■□□□□ 0.98
COMMD2-206ENST00000490008 FAM135AQ9P2D6 1515 aa21.15■□□□□ 0.98
COMMD2-206ENST00000490008 MPHOSPH9Q99550 1183 aa21.14■□□□□ 0.97
COMMD2-206ENST00000490008 CLTCQ00610 1675 aaKnown RBP21.13■□□□□ 0.97
COMMD2-206ENST00000490008 PKD2Q13563 968 aa21.13■□□□□ 0.97
COMMD2-206ENST00000490008 PRDM15P57071 1507 aaPredicted RBP21.13■□□□□ 0.97
COMMD2-206ENST00000490008 MROH1Q8NDA8 1641 aa21.11■□□□□ 0.97
COMMD2-206ENST00000490008 DEPDC5O75140 1603 aa21.1■□□□□ 0.97
COMMD2-206ENST00000490008 ARHGAP31Q2M1Z3 1444 aa21.1■□□□□ 0.97
COMMD2-206ENST00000490008 GCC2Q8IWJ2 1684 aa21.09■□□□□ 0.97
COMMD2-206ENST00000490008 PZPP20742 1482 aa21.09■□□□□ 0.97
COMMD2-206ENST00000490008 NPATQ14207 1427 aa21.09■□□□□ 0.97
COMMD2-206ENST00000490008 TNRQ92752 1358 aa21.09■□□□□ 0.97
COMMD2-206ENST00000490008 LMTK2Q8IWU2 1503 aa21.09■□□□□ 0.97
COMMD2-206ENST00000490008 STAG3Q9UJ98 1225 aa21.08■□□□□ 0.97
COMMD2-206ENST00000490008 UNC13BO14795 1591 aa21.06■□□□□ 0.96
COMMD2-206ENST00000490008 VWDEQ8N2E2 1590 aa21.06■□□□□ 0.96
COMMD2-206ENST00000490008 SLC52A1Q9NWF4 448 aa21.06■□□□□ 0.96
COMMD2-206ENST00000490008 MROH2AA6NES4 1674 aa21.05■□□□□ 0.96
COMMD2-206ENST00000490008 ZC3H13Q5T200 1668 aaKnown RBP21.05■□□□□ 0.96
COMMD2-206ENST00000490008 FOXD1Q16676 465 aa21.04■□□□□ 0.96
COMMD2-206ENST00000490008 UHRF1BP1Q6BDS2 1440 aa21.04■□□□□ 0.96
COMMD2-206ENST00000490008 C3P01024 1663 aa21.03■□□□□ 0.96
COMMD2-206ENST00000490008 IDI1Q13907 227 aa21.02■□□□□ 0.96
COMMD2-206ENST00000490008 THEMISQ8N1K5 641 aaPredicted RBP21.02■□□□□ 0.96
COMMD2-206ENST00000490008 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
COMMD2-206ENST00000490008 CEP152O94986 1710 aa21.01■□□□□ 0.95
COMMD2-206ENST00000490008 CHGAP10645 457 aaKnown RBP21.01■□□□□ 0.95
COMMD2-206ENST00000490008 CAMSAP1Q5T5Y3 1602 aa21■□□□□ 0.95
COMMD2-206ENST00000490008 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
COMMD2-206ENST00000490008 ERVK-7P63135 1459 aa21■□□□□ 0.95
COMMD2-206ENST00000490008 HSPA2P54652 639 aa20.99■□□□□ 0.95
COMMD2-206ENST00000490008 EFCAB6Q5THR3 1501 aa20.99■□□□□ 0.95
COMMD2-206ENST00000490008 SETD1BQ9UPS6 1966 aaKnown RBP20.97■□□□□ 0.95
COMMD2-206ENST00000490008 TET3O43151 1660 aa20.97■□□□□ 0.95
COMMD2-206ENST00000490008 NOS1P29475 1434 aa20.95■□□□□ 0.95
COMMD2-206ENST00000490008 NLRP1Q9C000 1473 aa20.94■□□□□ 0.94
COMMD2-206ENST00000490008 CFAP65Q6ZU64 1925 aaKnown RBP20.93■□□□□ 0.94
COMMD2-206ENST00000490008 SPATA31D1Q6ZQQ2 1576 aa20.93■□□□□ 0.94
COMMD2-206ENST00000490008 HDGFP51858 240 aaKnown RBP20.92■□□□□ 0.94
COMMD2-206ENST00000490008 A2ML1A8K2U0 1454 aa20.91■□□□□ 0.94
COMMD2-206ENST00000490008 ZNF326Q5BKZ1 582 aaKnown RBP20.91■□□□□ 0.94
COMMD2-206ENST00000490008 PTPRTO14522 1441 aa20.9■□□□□ 0.94
COMMD2-206ENST00000490008 ANKLE2Q86XL3 938 aa20.9■□□□□ 0.94
COMMD2-206ENST00000490008 EID1Q9Y6B2 187 aa20.9■□□□□ 0.94
COMMD2-206ENST00000490008 LMTK3Q96Q04 1460 aa20.88■□□□□ 0.93
COMMD2-206ENST00000490008 E9PCH4 1651 aa20.88■□□□□ 0.93
COMMD2-206ENST00000490008 PREX1Q8TCU6 1659 aa20.88■□□□□ 0.93
COMMD2-206ENST00000490008 TXNDC2Q86VQ3 553 aa20.86■□□□□ 0.93
COMMD2-206ENST00000490008 DMRT2Q9Y5R5 561 aa20.86■□□□□ 0.93
COMMD2-206ENST00000490008 NCKAP5LQ9HCH0 1330 aa20.85■□□□□ 0.93
COMMD2-206ENST00000490008 CCDC144AA2RUR9 1427 aa20.85■□□□□ 0.93
COMMD2-206ENST00000490008 UGGT1Q9NYU2 1555 aa20.85■□□□□ 0.93
COMMD2-206ENST00000490008 RGL3Q3MIN7 710 aa20.84■□□□□ 0.93
COMMD2-206ENST00000490008 BCANQ96GW7 911 aa20.84■□□□□ 0.93
COMMD2-206ENST00000490008 PLA2R1Q13018 1463 aa20.83■□□□□ 0.93
COMMD2-206ENST00000490008 PPP1R15AO75807 674 aaPredicted RBP20.83■□□□□ 0.93
COMMD2-206ENST00000490008 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.83■□□□□ 0.93
COMMD2-206ENST00000490008 CEP170BQ9Y4F5 1589 aaPredicted RBP20.83■□□□□ 0.92
COMMD2-206ENST00000490008 ANKRD30BQ9BXX2 1392 aa20.82■□□□□ 0.92
COMMD2-206ENST00000490008 SYNMO15061 1565 aa20.81■□□□□ 0.92
COMMD2-206ENST00000490008 MYO3AQ8NEV4 1616 aa20.81■□□□□ 0.92
COMMD2-206ENST00000490008 TMEM2Q9UHN6 1383 aa20.79■□□□□ 0.92
COMMD2-206ENST00000490008 DHX57Q6P158 1386 aaKnown RBP20.78■□□□□ 0.92
COMMD2-206ENST00000490008 LTKP29376 864 aa20.78■□□□□ 0.92
COMMD2-206ENST00000490008 NEUROD1Q13562 356 aa20.78■□□□□ 0.92
COMMD2-206ENST00000490008 NUTM2DQ5VT03 806 aaPredicted RBP20.78■□□□□ 0.92
COMMD2-206ENST00000490008 TRPM2O94759 1503 aa20.78■□□□□ 0.92
COMMD2-206ENST00000490008 RPGRIP1LQ68CZ1 1315 aa20.77■□□□□ 0.91
COMMD2-206ENST00000490008 VGFO15240 615 aaPredicted RBP20.75■□□□□ 0.91
COMMD2-206ENST00000490008 CCER1Q8TC90 406 aaPredicted RBP20.75■□□□□ 0.91
COMMD2-206ENST00000490008 PIK3C2BO00750 1634 aa20.75■□□□□ 0.91
COMMD2-206ENST00000490008 SPHKAPQ2M3C7 1700 aa20.74■□□□□ 0.91
COMMD2-206ENST00000490008 SIN3AQ96ST3 1273 aa20.74■□□□□ 0.91
COMMD2-206ENST00000490008 SENP3Q9H4L4 574 aaPredicted RBP20.74■□□□□ 0.91
COMMD2-206ENST00000490008 RIMS2Q9UQ26 1411 aa20.73■□□□□ 0.91
COMMD2-206ENST00000490008 ADGRB3O60242 1522 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms