RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 PLA2R1Q13018 1463 aa18.54■□□□□ 0.56
SEMA6C-208ENST00000489944 STRCQ7RTU9 1775 aa18.54■□□□□ 0.56
SEMA6C-208ENST00000489944 NCOA1Q15788 1441 aa18.54■□□□□ 0.56
SEMA6C-208ENST00000489944 PZPP20742 1482 aa18.52■□□□□ 0.56
SEMA6C-208ENST00000489944 WASHC2CQ9Y4E1 1318 aa18.52■□□□□ 0.56
SEMA6C-208ENST00000489944 RNF17Q9BXT8 1623 aaKnown RBP18.52■□□□□ 0.55
SEMA6C-208ENST00000489944 TCOF1Q13428 1488 aaKnown RBP18.52■□□□□ 0.55
SEMA6C-208ENST00000489944 DUOX2Q9NRD8 1548 aa18.51■□□□□ 0.55
SEMA6C-208ENST00000489944 PKD2Q13563 968 aa18.51■□□□□ 0.55
SEMA6C-208ENST00000489944 ZC3H13Q5T200 1668 aaKnown RBP18.5■□□□□ 0.55
SEMA6C-208ENST00000489944 FGD6Q6ZV73 1430 aa18.5■□□□□ 0.55
SEMA6C-208ENST00000489944 MYO3AQ8NEV4 1616 aa18.5■□□□□ 0.55
SEMA6C-208ENST00000489944 PTPN23Q9H3S7 1636 aa18.49■□□□□ 0.55
SEMA6C-208ENST00000489944 CERKQ8TCT0 537 aa18.49■□□□□ 0.55
SEMA6C-208ENST00000489944 CEP170BQ9Y4F5 1589 aaPredicted RBP18.49■□□□□ 0.55
SEMA6C-208ENST00000489944 ERBINQ96RT1 1412 aa18.49■□□□□ 0.55
SEMA6C-208ENST00000489944 A2ML1A8K2U0 1454 aa18.48■□□□□ 0.55
SEMA6C-208ENST00000489944 CAMSAP1Q5T5Y3 1602 aa18.48■□□□□ 0.55
SEMA6C-208ENST00000489944 NLRP1Q9C000 1473 aa18.46■□□□□ 0.55
SEMA6C-208ENST00000489944 TNRQ92752 1358 aa18.46■□□□□ 0.55
SEMA6C-208ENST00000489944 CROCC2H7BZ55 1655 aa18.46■□□□□ 0.55
SEMA6C-208ENST00000489944 ABCC5O15440 1437 aa18.46■□□□□ 0.55
SEMA6C-208ENST00000489944 IQSEC2Q5JU85 1478 aa18.46■□□□□ 0.54
SEMA6C-208ENST00000489944 DNMT1P26358 1616 aaKnown RBP18.45■□□□□ 0.54
SEMA6C-208ENST00000489944 DAPK1P53355 1430 aa18.45■□□□□ 0.54
SEMA6C-208ENST00000489944 ANKRD30AQ9BXX3 1397 aa18.43■□□□□ 0.54
SEMA6C-208ENST00000489944 KIF15Q9NS87 1388 aa18.43■□□□□ 0.54
SEMA6C-208ENST00000489944 ABCC3O15438 1527 aa18.42■□□□□ 0.54
SEMA6C-208ENST00000489944 ARHGAP31Q2M1Z3 1444 aa18.4■□□□□ 0.54
SEMA6C-208ENST00000489944 PRDM15P57071 1507 aaPredicted RBP18.4■□□□□ 0.54
SEMA6C-208ENST00000489944 THEMISQ8N1K5 641 aaPredicted RBP18.4■□□□□ 0.54
SEMA6C-208ENST00000489944 SPATA31D1Q6ZQQ2 1576 aa18.39■□□□□ 0.53
SEMA6C-208ENST00000489944 ADGRL2O95490 1459 aa18.39■□□□□ 0.53
SEMA6C-208ENST00000489944 MROH1Q8NDA8 1641 aa18.38■□□□□ 0.53
SEMA6C-208ENST00000489944 KANK1Q14678 1352 aa18.38■□□□□ 0.53
SEMA6C-208ENST00000489944 FBXO31Q5XUX0 539 aaPredicted RBP18.37■□□□□ 0.53
SEMA6C-208ENST00000489944 DEPDC5O75140 1603 aa18.36■□□□□ 0.53
SEMA6C-208ENST00000489944 LTBP4Q8N2S1 1624 aa18.35■□□□□ 0.53
SEMA6C-208ENST00000489944 RRP7BPQ9NSQ0 103 aa18.35■□□□□ 0.53
SEMA6C-208ENST00000489944 UGGT1Q9NYU2 1555 aa18.34■□□□□ 0.53
SEMA6C-208ENST00000489944 ERVK-7P63135 1459 aa18.34■□□□□ 0.53
SEMA6C-208ENST00000489944 ANKLE2Q86XL3 938 aa18.34■□□□□ 0.53
SEMA6C-208ENST00000489944 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.53
SEMA6C-208ENST00000489944 NCKAP5LQ9HCH0 1330 aa18.33■□□□□ 0.53
SEMA6C-208ENST00000489944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.31■□□□□ 0.52
SEMA6C-208ENST00000489944 POLR1AO95602 1720 aaPredicted RBP18.31■□□□□ 0.52
SEMA6C-208ENST00000489944 MED14O60244 1454 aa18.31■□□□□ 0.52
SEMA6C-208ENST00000489944 VWDEQ8N2E2 1590 aa18.3■□□□□ 0.52
SEMA6C-208ENST00000489944 FAM50AQ14320 339 aaKnown RBP18.28■□□□□ 0.52
SEMA6C-208ENST00000489944 CEP152O94986 1710 aa18.28■□□□□ 0.52
SEMA6C-208ENST00000489944 ROCK1Q13464 1354 aa18.28■□□□□ 0.52
SEMA6C-208ENST00000489944 ANKRD50Q9ULJ7 1429 aa18.26■□□□□ 0.51
SEMA6C-208ENST00000489944 RPRD2Q5VT52 1461 aaKnown RBP18.26■□□□□ 0.51
SEMA6C-208ENST00000489944 NEURL4Q96JN8 1562 aa18.25■□□□□ 0.51
SEMA6C-208ENST00000489944 KDM5AP29375 1690 aaKnown RBP18.25■□□□□ 0.51
SEMA6C-208ENST00000489944 CPS1P31327 1500 aa18.25■□□□□ 0.51
SEMA6C-208ENST00000489944 CHIC2Q9UKJ5 165 aa18.25■□□□□ 0.51
SEMA6C-208ENST00000489944 ZNF335Q9H4Z2 1342 aaPredicted RBP18.23■□□□□ 0.51
SEMA6C-208ENST00000489944 NPHP4O75161 1426 aaPredicted RBP18.23■□□□□ 0.51
SEMA6C-208ENST00000489944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.51
SEMA6C-208ENST00000489944 SLIT1O75093 1534 aa18.22■□□□□ 0.51
SEMA6C-208ENST00000489944 EFCAB6Q5THR3 1501 aa18.21■□□□□ 0.51
SEMA6C-208ENST00000489944 UBR1Q8IWV7 1749 aa18.2■□□□□ 0.5
SEMA6C-208ENST00000489944 ARHGAP23Q9P227 1491 aa18.2■□□□□ 0.5
SEMA6C-208ENST00000489944 SLC52A1Q9NWF4 448 aa18.2■□□□□ 0.5
SEMA6C-208ENST00000489944 NOS1P29475 1434 aa18.19■□□□□ 0.5
SEMA6C-208ENST00000489944 SCAF11Q99590 1463 aaKnown RBP18.19■□□□□ 0.5
SEMA6C-208ENST00000489944 IQGAP1P46940 1657 aa18.18■□□□□ 0.5
SEMA6C-208ENST00000489944 EID1Q9Y6B2 187 aa18.18■□□□□ 0.5
SEMA6C-208ENST00000489944 UNC13BO14795 1591 aa18.16■□□□□ 0.5
SEMA6C-208ENST00000489944 TET3O43151 1660 aa18.15■□□□□ 0.5
SEMA6C-208ENST00000489944 TMEM2Q9UHN6 1383 aa18.15■□□□□ 0.5
SEMA6C-208ENST00000489944 CFAP65Q6ZU64 1925 aaKnown RBP18.14■□□□□ 0.49
SEMA6C-208ENST00000489944 STAG3Q9UJ98 1225 aa18.14■□□□□ 0.49
SEMA6C-208ENST00000489944 TXNDC2Q86VQ3 553 aa18.13■□□□□ 0.49
SEMA6C-208ENST00000489944 PIK3C2BO00750 1634 aa18.12■□□□□ 0.49
SEMA6C-208ENST00000489944 TOM1O60784 492 aa18.12■□□□□ 0.49
SEMA6C-208ENST00000489944 HDGFP51858 240 aaKnown RBP18.12■□□□□ 0.49
SEMA6C-208ENST00000489944 IDI1Q13907 227 aa18.12■□□□□ 0.49
SEMA6C-208ENST00000489944 GCC2Q8IWJ2 1684 aa18.12■□□□□ 0.49
SEMA6C-208ENST00000489944 UBAP1LF5GYI3 381 aa18.11■□□□□ 0.49
SEMA6C-208ENST00000489944 RRBP1Q9P2E9 1410 aaKnown RBP18.11■□□□□ 0.49
SEMA6C-208ENST00000489944 SYNMO15061 1565 aa18.1■□□□□ 0.49
SEMA6C-208ENST00000489944 ADGRB3O60242 1522 aa18.09■□□□□ 0.49
SEMA6C-208ENST00000489944 IQGAP3Q86VI3 1631 aa18.09■□□□□ 0.49
SEMA6C-208ENST00000489944 LTKP29376 864 aa18.07■□□□□ 0.48
SEMA6C-208ENST00000489944 NUP155O75694 1391 aa18.04■□□□□ 0.48
SEMA6C-208ENST00000489944 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.03■□□□□ 0.48
SEMA6C-208ENST00000489944 LRRC7Q96NW7 1537 aa18.03■□□□□ 0.48
SEMA6C-208ENST00000489944 E9PCH4 1651 aa17.99■□□□□ 0.47
SEMA6C-208ENST00000489944 ZFYVE9O95405 1425 aa17.99■□□□□ 0.47
SEMA6C-208ENST00000489944 KCNA6P17658 529 aa17.99■□□□□ 0.47
SEMA6C-208ENST00000489944 PLEKHG1Q9ULL1 1385 aa17.99■□□□□ 0.47
SEMA6C-208ENST00000489944 ACIN1Q9UKV3 1341 aaKnown RBP17.98■□□□□ 0.47
SEMA6C-208ENST00000489944 TMEM131LA2VDJ0 1609 aa17.98■□□□□ 0.47
SEMA6C-208ENST00000489944 ITGAEP38570 1179 aa17.98■□□□□ 0.47
SEMA6C-208ENST00000489944 STRCP1A6NGW2 1772 aa17.96■□□□□ 0.47
SEMA6C-208ENST00000489944 NKTRP30414 1462 aaKnown RBP17.96■□□□□ 0.47
SEMA6C-208ENST00000489944 HFM1A2PYH4 1435 aa17.96■□□□□ 0.47
SEMA6C-208ENST00000489944 RIMS2Q9UQ26 1411 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms