RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 POLR1AO95602 1720 aaPredicted RBP13.14□□□□□ -0.31
SMG5-205ENST00000489907 CAMSAP2Q08AD1 1489 aa13.14□□□□□ -0.31
SMG5-205ENST00000489907 CCDC141Q6ZP82 1450 aa13.14□□□□□ -0.31
SMG5-205ENST00000489907 ARHGEF5Q12774 1597 aa13.13□□□□□ -0.31
SMG5-205ENST00000489907 SPATA31D1Q6ZQQ2 1576 aa13.13□□□□□ -0.31
SMG5-205ENST00000489907 PZPP20742 1482 aa13.13□□□□□ -0.31
SMG5-205ENST00000489907 SOCS7O14512 581 aa13.13□□□□□ -0.31
SMG5-205ENST00000489907 KIF3BO15066 747 aa13.13□□□□□ -0.31
SMG5-205ENST00000489907 RSPH4AQ5TD94 716 aa13.13□□□□□ -0.31
SMG5-205ENST00000489907 FAM135AQ9P2D6 1515 aa13.13□□□□□ -0.31
SMG5-205ENST00000489907 KDM5DQ9BY66 1539 aa13.12□□□□□ -0.31
SMG5-205ENST00000489907 TNRQ92752 1358 aa13.1□□□□□ -0.31
SMG5-205ENST00000489907 UBAP1LF5GYI3 381 aa13.09□□□□□ -0.31
SMG5-205ENST00000489907 MIA2Q96PC5 1412 aa13.09□□□□□ -0.31
SMG5-205ENST00000489907 VWDEQ8N2E2 1590 aa13.08□□□□□ -0.32
SMG5-205ENST00000489907 MAST1Q9Y2H9 1570 aa13.08□□□□□ -0.32
SMG5-205ENST00000489907 RNF17Q9BXT8 1623 aaKnown RBP13.08□□□□□ -0.32
SMG5-205ENST00000489907 ALKQ9UM73 1620 aa13.08□□□□□ -0.32
SMG5-205ENST00000489907 MED14O60244 1454 aa13.08□□□□□ -0.32
SMG5-205ENST00000489907 LRRC9Q6ZRR7 1453 aa13.08□□□□□ -0.32
SMG5-205ENST00000489907 WASHC2CQ9Y4E1 1318 aa13.08□□□□□ -0.32
SMG5-205ENST00000489907 DEPDC5O75140 1603 aa13.07□□□□□ -0.32
SMG5-205ENST00000489907 MROH1Q8NDA8 1641 aa13.07□□□□□ -0.32
SMG5-205ENST00000489907 SHANK2Q9UPX8 1470 aa13.07□□□□□ -0.32
SMG5-205ENST00000489907 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMG5-205ENST00000489907 STRCP1A6NGW2 1772 aa13.06□□□□□ -0.32
SMG5-205ENST00000489907 NLRP1Q9C000 1473 aa13.05□□□□□ -0.32
SMG5-205ENST00000489907 CPS1P31327 1500 aa13.05□□□□□ -0.32
SMG5-205ENST00000489907 KANK4Q5T7N3 995 aaPredicted RBP13.05□□□□□ -0.32
SMG5-205ENST00000489907 UGGT1Q9NYU2 1555 aa13.05□□□□□ -0.32
SMG5-205ENST00000489907 VPS8Q8N3P4 1428 aa13.05□□□□□ -0.32
SMG5-205ENST00000489907 ABCC3O15438 1527 aa13.04□□□□□ -0.32
SMG5-205ENST00000489907 EIF2AK4Q9P2K8 1649 aaKnown RBP13.04□□□□□ -0.32
SMG5-205ENST00000489907 LOC105371045A0A1W2PR82 267 aa13.04□□□□□ -0.32
SMG5-205ENST00000489907 TSPY4P0CV99 314 aa13.04□□□□□ -0.32
SMG5-205ENST00000489907 TSPY10P0CW01 314 aa13.04□□□□□ -0.32
SMG5-205ENST00000489907 THEMISQ8N1K5 641 aaPredicted RBP13.04□□□□□ -0.32
SMG5-205ENST00000489907 ZC3H13Q5T200 1668 aaKnown RBP13.04□□□□□ -0.32
SMG5-205ENST00000489907 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
SMG5-205ENST00000489907 ANKLE2Q86XL3 938 aa13.03□□□□□ -0.32
SMG5-205ENST00000489907 CFAP65Q6ZU64 1925 aaKnown RBP13.02□□□□□ -0.32
SMG5-205ENST00000489907 CEP152O94986 1710 aa13.02□□□□□ -0.33
SMG5-205ENST00000489907 HSPA1LP34931 641 aa13.01□□□□□ -0.33
SMG5-205ENST00000489907 NPHP4O75161 1426 aaPredicted RBP13.01□□□□□ -0.33
SMG5-205ENST00000489907 IQGAP1P46940 1657 aa13.01□□□□□ -0.33
SMG5-205ENST00000489907 UBR1Q8IWV7 1749 aa13.01□□□□□ -0.33
SMG5-205ENST00000489907 ERVK-7P63135 1459 aa13□□□□□ -0.33
SMG5-205ENST00000489907 MYOM3Q5VTT5 1437 aa12.98□□□□□ -0.33
SMG5-205ENST00000489907 TOM1O60784 492 aa12.98□□□□□ -0.33
SMG5-205ENST00000489907 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
SMG5-205ENST00000489907 MED1Q15648 1581 aaPredicted RBP12.97□□□□□ -0.33
SMG5-205ENST00000489907 DUOX2Q9NRD8 1548 aa12.97□□□□□ -0.33
SMG5-205ENST00000489907 XIRP1Q702N8 1843 aaKnown RBP12.97□□□□□ -0.33
SMG5-205ENST00000489907 CROCC2H7BZ55 1655 aa12.96□□□□□ -0.33
SMG5-205ENST00000489907 PIP4K2BP78356 416 aa12.96□□□□□ -0.33
SMG5-205ENST00000489907 ARHGAP23Q9P227 1491 aa12.96□□□□□ -0.34
SMG5-205ENST00000489907 ABCC5O15440 1437 aa12.96□□□□□ -0.34
SMG5-205ENST00000489907 ARHGAP31Q2M1Z3 1444 aa12.96□□□□□ -0.34
SMG5-205ENST00000489907 SLIT1O75093 1534 aa12.95□□□□□ -0.34
SMG5-205ENST00000489907 PRDM15P57071 1507 aaPredicted RBP12.95□□□□□ -0.34
SMG5-205ENST00000489907 LTKP29376 864 aa12.95□□□□□ -0.34
SMG5-205ENST00000489907 SYNMO15061 1565 aa12.92□□□□□ -0.34
SMG5-205ENST00000489907 PIK3C2BO00750 1634 aa12.91□□□□□ -0.34
SMG5-205ENST00000489907 PTPN23Q9H3S7 1636 aa12.91□□□□□ -0.34
SMG5-205ENST00000489907 SCAF11Q99590 1463 aaKnown RBP12.91□□□□□ -0.34
SMG5-205ENST00000489907 KIF15Q9NS87 1388 aa12.91□□□□□ -0.34
SMG5-205ENST00000489907 SCAF1Q9H7N4 1312 aaKnown RBP12.9□□□□□ -0.34
SMG5-205ENST00000489907 ERBINQ96RT1 1412 aa12.9□□□□□ -0.34
SMG5-205ENST00000489907 KDM5AP29375 1690 aaKnown RBP12.89□□□□□ -0.35
SMG5-205ENST00000489907 DAPK1P53355 1430 aa12.89□□□□□ -0.35
SMG5-205ENST00000489907 TXNDC2Q86VQ3 553 aa12.89□□□□□ -0.35
SMG5-205ENST00000489907 RRP7BPQ9NSQ0 103 aa12.89□□□□□ -0.35
SMG5-205ENST00000489907 LMTK2Q8IWU2 1503 aa12.88□□□□□ -0.35
SMG5-205ENST00000489907 TET3O43151 1660 aa12.88□□□□□ -0.35
SMG5-205ENST00000489907 TMEM2Q9UHN6 1383 aa12.86□□□□□ -0.35
SMG5-205ENST00000489907 IDI1Q13907 227 aa12.86□□□□□ -0.35
SMG5-205ENST00000489907 FGD6Q6ZV73 1430 aa12.86□□□□□ -0.35
SMG5-205ENST00000489907 NOS1P29475 1434 aa12.85□□□□□ -0.35
SMG5-205ENST00000489907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMG5-205ENST00000489907 RGS17Q9UGC6 210 aaPredicted RBP12.84□□□□□ -0.35
SMG5-205ENST00000489907 EFCAB6Q5THR3 1501 aa12.83□□□□□ -0.36
SMG5-205ENST00000489907 FAM135BQ49AJ0 1406 aa12.81□□□□□ -0.36
SMG5-205ENST00000489907 ADGRL2O95490 1459 aa12.81□□□□□ -0.36
SMG5-205ENST00000489907 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
SMG5-205ENST00000489907 EID1Q9Y6B2 187 aa12.81□□□□□ -0.36
SMG5-205ENST00000489907 MYO5BQ9ULV0 1848 aa12.81□□□□□ -0.36
SMG5-205ENST00000489907 ANKRD30AQ9BXX3 1397 aa12.81□□□□□ -0.36
SMG5-205ENST00000489907 KCNA6P17658 529 aa12.8□□□□□ -0.36
SMG5-205ENST00000489907 KANK1Q14678 1352 aa12.8□□□□□ -0.36
SMG5-205ENST00000489907 NWD1Q149M9 1564 aa12.79□□□□□ -0.36
SMG5-205ENST00000489907 SENP3Q9H4L4 574 aaPredicted RBP12.79□□□□□ -0.36
SMG5-205ENST00000489907 TMEM94Q12767 1356 aa12.79□□□□□ -0.36
SMG5-205ENST00000489907 ADGRB3O60242 1522 aa12.78□□□□□ -0.36
SMG5-205ENST00000489907 SLC26A8Q96RN1 970 aa12.78□□□□□ -0.36
SMG5-205ENST00000489907 CHD2O14647 1828 aaKnown RBP12.78□□□□□ -0.36
SMG5-205ENST00000489907 ROBO1Q9Y6N7 1651 aa12.77□□□□□ -0.36
SMG5-205ENST00000489907 ZFYVE9O95405 1425 aa12.77□□□□□ -0.37
SMG5-205ENST00000489907 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
SMG5-205ENST00000489907 SLC52A1Q9NWF4 448 aa12.76□□□□□ -0.37
SMG5-205ENST00000489907 RPRD2Q5VT52 1461 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms