RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 CAMSAP2Q08AD1 1489 aa15.01□□□□□ -0.01
CCT3-213ENST00000489870 PLA2R1Q13018 1463 aa15.01□□□□□ -0.01
CCT3-213ENST00000489870 KIF3BO15066 747 aa15.01□□□□□ -0.01
CCT3-213ENST00000489870 APLP2Q06481 763 aa15.01□□□□□ -0.01
CCT3-213ENST00000489870 IQSEC2Q5JU85 1478 aa15.01□□□□□ -0.01
CCT3-213ENST00000489870 CLTCQ00610 1675 aaKnown RBP14.99□□□□□ -0.01
CCT3-213ENST00000489870 MYOM3Q5VTT5 1437 aa14.99□□□□□ -0.01
CCT3-213ENST00000489870 WASHC2CQ9Y4E1 1318 aa14.98□□□□□ -0.01
CCT3-213ENST00000489870 MAST1Q9Y2H9 1570 aa14.97□□□□□ -0.01
CCT3-213ENST00000489870 ZNF142P52746 1687 aaPredicted RBP14.97□□□□□ -0.01
CCT3-213ENST00000489870 CAMSAP1Q5T5Y3 1602 aa14.95□□□□□ -0.02
CCT3-213ENST00000489870 A2ML1A8K2U0 1454 aa14.95□□□□□ -0.02
CCT3-213ENST00000489870 PZPP20742 1482 aa14.95□□□□□ -0.02
CCT3-213ENST00000489870 KDM5DQ9BY66 1539 aa14.94□□□□□ -0.02
CCT3-213ENST00000489870 KANK4Q5T7N3 995 aaPredicted RBP14.94□□□□□ -0.02
CCT3-213ENST00000489870 THEMISQ8N1K5 641 aaPredicted RBP14.94□□□□□ -0.02
CCT3-213ENST00000489870 TCOF1Q13428 1488 aaKnown RBP14.94□□□□□ -0.02
CCT3-213ENST00000489870 CEP170BQ9Y4F5 1589 aaPredicted RBP14.93□□□□□ -0.02
CCT3-213ENST00000489870 NLRP1Q9C000 1473 aa14.92□□□□□ -0.02
CCT3-213ENST00000489870 TNRQ92752 1358 aa14.91□□□□□ -0.02
CCT3-213ENST00000489870 MYO3AQ8NEV4 1616 aa14.91□□□□□ -0.02
CCT3-213ENST00000489870 EIF2AK4Q9P2K8 1649 aaKnown RBP14.91□□□□□ -0.02
CCT3-213ENST00000489870 LTBP4Q8N2S1 1624 aa14.9□□□□□ -0.02
CCT3-213ENST00000489870 DUOX2Q9NRD8 1548 aa14.89□□□□□ -0.03
CCT3-213ENST00000489870 ANKLE2Q86XL3 938 aa14.89□□□□□ -0.03
CCT3-213ENST00000489870 SHANK2Q9UPX8 1470 aa14.89□□□□□ -0.03
CCT3-213ENST00000489870 RNF17Q9BXT8 1623 aaKnown RBP14.88□□□□□ -0.03
CCT3-213ENST00000489870 ZC3H13Q5T200 1668 aaKnown RBP14.88□□□□□ -0.03
CCT3-213ENST00000489870 NCKAP5LQ9HCH0 1330 aa14.88□□□□□ -0.03
CCT3-213ENST00000489870 DNMT1P26358 1616 aaKnown RBP14.88□□□□□ -0.03
CCT3-213ENST00000489870 FBXO31Q5XUX0 539 aaPredicted RBP14.87□□□□□ -0.03
CCT3-213ENST00000489870 ARHGAP31Q2M1Z3 1444 aa14.85□□□□□ -0.03
CCT3-213ENST00000489870 ERBINQ96RT1 1412 aa14.85□□□□□ -0.03
CCT3-213ENST00000489870 ABCC5O15440 1437 aa14.83□□□□□ -0.03
CCT3-213ENST00000489870 MED14O60244 1454 aa14.83□□□□□ -0.03
CCT3-213ENST00000489870 ANKRD30AQ9BXX3 1397 aa14.83□□□□□ -0.04
CCT3-213ENST00000489870 FGD6Q6ZV73 1430 aa14.83□□□□□ -0.04
CCT3-213ENST00000489870 ABCC3O15438 1527 aa14.82□□□□□ -0.04
CCT3-213ENST00000489870 KIF15Q9NS87 1388 aa14.82□□□□□ -0.04
CCT3-213ENST00000489870 SPATA31D1Q6ZQQ2 1576 aa14.81□□□□□ -0.04
CCT3-213ENST00000489870 UGGT1Q9NYU2 1555 aa14.81□□□□□ -0.04
CCT3-213ENST00000489870 DEPDC5O75140 1603 aa14.81□□□□□ -0.04
CCT3-213ENST00000489870 PTPN23Q9H3S7 1636 aa14.81□□□□□ -0.04
CCT3-213ENST00000489870 KANK1Q14678 1352 aa14.81□□□□□ -0.04
CCT3-213ENST00000489870 ZNF335Q9H4Z2 1342 aaPredicted RBP14.8□□□□□ -0.04
CCT3-213ENST00000489870 CPS1P31327 1500 aa14.79□□□□□ -0.04
CCT3-213ENST00000489870 DAPK1P53355 1430 aa14.79□□□□□ -0.04
CCT3-213ENST00000489870 POLR1AO95602 1720 aaPredicted RBP14.78□□□□□ -0.04
CCT3-213ENST00000489870 RRP7BPQ9NSQ0 103 aa14.78□□□□□ -0.04
CCT3-213ENST00000489870 PRDM15P57071 1507 aaPredicted RBP14.77□□□□□ -0.04
CCT3-213ENST00000489870 ERVK-7P63135 1459 aa14.77□□□□□ -0.04
CCT3-213ENST00000489870 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.77□□□□□ -0.04
CCT3-213ENST00000489870 CROCC2H7BZ55 1655 aa14.77□□□□□ -0.05
CCT3-213ENST00000489870 MROH1Q8NDA8 1641 aa14.77□□□□□ -0.05
CCT3-213ENST00000489870 TOM1O60784 492 aa14.76□□□□□ -0.05
CCT3-213ENST00000489870 NPHP4O75161 1426 aaPredicted RBP14.75□□□□□ -0.05
CCT3-213ENST00000489870 LMTK2Q8IWU2 1503 aa14.75□□□□□ -0.05
CCT3-213ENST00000489870 ADGRL2O95490 1459 aa14.75□□□□□ -0.05
CCT3-213ENST00000489870 NEURL4Q96JN8 1562 aa14.74□□□□□ -0.05
CCT3-213ENST00000489870 UBAP1LF5GYI3 381 aa14.74□□□□□ -0.05
CCT3-213ENST00000489870 SLC52A1Q9NWF4 448 aa14.74□□□□□ -0.05
CCT3-213ENST00000489870 EID1Q9Y6B2 187 aa14.73□□□□□ -0.05
CCT3-213ENST00000489870 KDM5AP29375 1690 aaKnown RBP14.73□□□□□ -0.05
CCT3-213ENST00000489870 CFAP65Q6ZU64 1925 aaKnown RBP14.72□□□□□ -0.05
CCT3-213ENST00000489870 SLIT1O75093 1534 aa14.71□□□□□ -0.05
CCT3-213ENST00000489870 VWDEQ8N2E2 1590 aa14.71□□□□□ -0.05
CCT3-213ENST00000489870 ARHGAP23Q9P227 1491 aa14.7□□□□□ -0.06
CCT3-213ENST00000489870 HDGFP51858 240 aaKnown RBP14.7□□□□□ -0.06
CCT3-213ENST00000489870 RPRD2Q5VT52 1461 aaKnown RBP14.69□□□□□ -0.06
CCT3-213ENST00000489870 CEP152O94986 1710 aa14.69□□□□□ -0.06
CCT3-213ENST00000489870 TXNDC2Q86VQ3 553 aa14.69□□□□□ -0.06
CCT3-213ENST00000489870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.061e-14■■□□□ 14.3
CCT3-213ENST00000489870 UBR1Q8IWV7 1749 aa14.69□□□□□ -0.06
CCT3-213ENST00000489870 IQGAP1P46940 1657 aa14.68□□□□□ -0.06
CCT3-213ENST00000489870 CHIC2Q9UKJ5 165 aa14.68□□□□□ -0.06
CCT3-213ENST00000489870 ROCK1Q13464 1354 aa14.68□□□□□ -0.06
CCT3-213ENST00000489870 SCAF11Q99590 1463 aaKnown RBP14.68□□□□□ -0.06
CCT3-213ENST00000489870 ANKRD50Q9ULJ7 1429 aa14.67□□□□□ -0.06
CCT3-213ENST00000489870 FAM50AQ14320 339 aaKnown RBP14.67□□□□□ -0.06
CCT3-213ENST00000489870 STAG3Q9UJ98 1225 aa14.67□□□□□ -0.06
CCT3-213ENST00000489870 NOS1P29475 1434 aa14.66□□□□□ -0.06
CCT3-213ENST00000489870 TMEM2Q9UHN6 1383 aa14.66□□□□□ -0.06
CCT3-213ENST00000489870 IDI1Q13907 227 aa14.66□□□□□ -0.06
CCT3-213ENST00000489870 DISP3Q9P2K9 1392 aa14.64□□□□□ -0.07
CCT3-213ENST00000489870 LTKP29376 864 aa14.64□□□□□ -0.07
CCT3-213ENST00000489870 EFCAB6Q5THR3 1501 aa14.61□□□□□ -0.07
CCT3-213ENST00000489870 SYNMO15061 1565 aa14.6□□□□□ -0.07
CCT3-213ENST00000489870 KCNA6P17658 529 aa14.6□□□□□ -0.07
CCT3-213ENST00000489870 LRRC7Q96NW7 1537 aa14.6□□□□□ -0.07
CCT3-213ENST00000489870 PIK3C2BO00750 1634 aa14.59□□□□□ -0.07
CCT3-213ENST00000489870 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.59□□□□□ -0.07
CCT3-213ENST00000489870 TET3O43151 1660 aa14.58□□□□□ -0.08
CCT3-213ENST00000489870 SOCS7O14512 581 aa14.57□□□□□ -0.08
CCT3-213ENST00000489870 HSPA1LP34931 641 aa14.55□□□□□ -0.08
CCT3-213ENST00000489870 PIP4K2BP78356 416 aa14.55□□□□□ -0.08
CCT3-213ENST00000489870 TBX22Q9Y458 520 aa14.55□□□□□ -0.08
CCT3-213ENST00000489870 UNC13BO14795 1591 aa14.55□□□□□ -0.08
CCT3-213ENST00000489870 GCC2Q8IWJ2 1684 aa14.55□□□□□ -0.08
CCT3-213ENST00000489870 NCOA3Q9Y6Q9 1424 aa14.54□□□□□ -0.08
CCT3-213ENST00000489870 ADGRB3O60242 1522 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms