RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-222ENST00000489772 WASHC2CQ9Y4E1 1318 aa17.03■□□□□ 0.32
GGA1-222ENST00000489772 ANKRD30AQ9BXX3 1397 aa17.02■□□□□ 0.32
GGA1-222ENST00000489772 DNMT1P26358 1616 aaKnown RBP17.02■□□□□ 0.31
GGA1-222ENST00000489772 DUOX2Q9NRD8 1548 aa17.01■□□□□ 0.31
GGA1-222ENST00000489772 HSPA2P54652 639 aa17.01■□□□□ 0.31
GGA1-222ENST00000489772 NPATQ14207 1427 aa17■□□□□ 0.31
GGA1-222ENST00000489772 UHRF1BP1Q6BDS2 1440 aa17■□□□□ 0.31
GGA1-222ENST00000489772 C3P01024 1663 aa16.99■□□□□ 0.31
GGA1-222ENST00000489772 ERBINQ96RT1 1412 aa16.98■□□□□ 0.31
GGA1-222ENST00000489772 MROH2AA6NES4 1674 aa16.98■□□□□ 0.31
GGA1-222ENST00000489772 FAM135AQ9P2D6 1515 aa16.98■□□□□ 0.31
GGA1-222ENST00000489772 CROCC2H7BZ55 1655 aa16.98■□□□□ 0.31
GGA1-222ENST00000489772 CLTCQ00610 1675 aaKnown RBP16.98■□□□□ 0.31
GGA1-222ENST00000489772 NCOA1Q15788 1441 aa16.97■□□□□ 0.31
GGA1-222ENST00000489772 KDM5DQ9BY66 1539 aa16.97■□□□□ 0.31
GGA1-222ENST00000489772 PTPRKQ15262 1439 aa16.96■□□□□ 0.31
GGA1-222ENST00000489772 EIF2AK4Q9P2K8 1649 aaKnown RBP16.95■□□□□ 0.3
GGA1-222ENST00000489772 PREX1Q8TCU6 1659 aa16.95■□□□□ 0.3
GGA1-222ENST00000489772 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.94■□□□□ 0.3
GGA1-222ENST00000489772 ADGRL2O95490 1459 aa16.94■□□□□ 0.3
GGA1-222ENST00000489772 RNF17Q9BXT8 1623 aaKnown RBP16.93■□□□□ 0.3
GGA1-222ENST00000489772 ITGAEP38570 1179 aa16.91■□□□□ 0.3
GGA1-222ENST00000489772 FBXO31Q5XUX0 539 aaPredicted RBP16.91■□□□□ 0.3
GGA1-222ENST00000489772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.32e-7■□□□□ 9.8
GGA1-222ENST00000489772 PZPP20742 1482 aa16.91■□□□□ 0.3
GGA1-222ENST00000489772 SETD1BQ9UPS6 1966 aaKnown RBP16.91■□□□□ 0.3
GGA1-222ENST00000489772 ABCC3O15438 1527 aa16.9■□□□□ 0.3
GGA1-222ENST00000489772 KANK1Q14678 1352 aa16.9■□□□□ 0.3
GGA1-222ENST00000489772 ROCK1Q13464 1354 aa16.89■□□□□ 0.29
GGA1-222ENST00000489772 ANKRD50Q9ULJ7 1429 aa16.88■□□□□ 0.29
GGA1-222ENST00000489772 TNRQ92752 1358 aa16.88■□□□□ 0.29
GGA1-222ENST00000489772 DMRT2Q9Y5R5 561 aa16.88■□□□□ 0.29
GGA1-222ENST00000489772 RRBP1Q9P2E9 1410 aaKnown RBP16.88■□□□□ 0.29
GGA1-222ENST00000489772 MROH1Q8NDA8 1641 aa16.87■□□□□ 0.29
GGA1-222ENST00000489772 PRDM15P57071 1507 aaPredicted RBP16.86■□□□□ 0.29
GGA1-222ENST00000489772 ZC3H13Q5T200 1668 aaKnown RBP16.86■□□□□ 0.29
GGA1-222ENST00000489772 MYO3AQ8NEV4 1616 aa16.83■□□□□ 0.28
GGA1-222ENST00000489772 ARHGAP31Q2M1Z3 1444 aa16.83■□□□□ 0.28
GGA1-222ENST00000489772 A2ML1A8K2U0 1454 aa16.82■□□□□ 0.28
GGA1-222ENST00000489772 CEP170BQ9Y4F5 1589 aaPredicted RBP16.82■□□□□ 0.28
GGA1-222ENST00000489772 DEPDC5O75140 1603 aa16.81■□□□□ 0.28
GGA1-222ENST00000489772 NLRP1Q9C000 1473 aa16.81■□□□□ 0.28
GGA1-222ENST00000489772 ERVK-7P63135 1459 aa16.8■□□□□ 0.28
GGA1-222ENST00000489772 LMTK2Q8IWU2 1503 aa16.79■□□□□ 0.28
GGA1-222ENST00000489772 CAMSAP1Q5T5Y3 1602 aa16.79■□□□□ 0.28
GGA1-222ENST00000489772 SPATA31D1Q6ZQQ2 1576 aa16.78■□□□□ 0.28
GGA1-222ENST00000489772 PKD2Q13563 968 aa16.78■□□□□ 0.28
GGA1-222ENST00000489772 THEMISQ8N1K5 641 aaPredicted RBP16.78■□□□□ 0.28
GGA1-222ENST00000489772 ZNF142P52746 1687 aaPredicted RBP16.78■□□□□ 0.28
GGA1-222ENST00000489772 VWDEQ8N2E2 1590 aa16.78■□□□□ 0.28
GGA1-222ENST00000489772 PLA2R1Q13018 1463 aa16.78■□□□□ 0.28
GGA1-222ENST00000489772 NCKAP5LQ9HCH0 1330 aa16.77■□□□□ 0.28
GGA1-222ENST00000489772 PTPRTO14522 1441 aa16.77■□□□□ 0.27
GGA1-222ENST00000489772 CEP152O94986 1710 aa16.76■□□□□ 0.27
GGA1-222ENST00000489772 STRCQ7RTU9 1775 aa16.75■□□□□ 0.27
GGA1-222ENST00000489772 NUP155O75694 1391 aa16.73■□□□□ 0.27
GGA1-222ENST00000489772 UGGT1Q9NYU2 1555 aa16.73■□□□□ 0.27
GGA1-222ENST00000489772 ANKLE2Q86XL3 938 aa16.73■□□□□ 0.27
GGA1-222ENST00000489772 EFCAB6Q5THR3 1501 aa16.72■□□□□ 0.27
GGA1-222ENST00000489772 UNC13BO14795 1591 aa16.71■□□□□ 0.27
GGA1-222ENST00000489772 RPRD2Q5VT52 1461 aaKnown RBP16.7■□□□□ 0.26
GGA1-222ENST00000489772 STAG3Q9UJ98 1225 aa16.7■□□□□ 0.26
GGA1-222ENST00000489772 NAIPQ13075 1403 aa16.69■□□□□ 0.26
GGA1-222ENST00000489772 SLC52A1Q9NWF4 448 aa16.69■□□□□ 0.26
GGA1-222ENST00000489772 HFM1A2PYH4 1435 aa16.68■□□□□ 0.26
GGA1-222ENST00000489772 NOS1P29475 1434 aa16.68■□□□□ 0.26
GGA1-222ENST00000489772 IDI1Q13907 227 aa16.68■□□□□ 0.26
GGA1-222ENST00000489772 CERKQ8TCT0 537 aa16.66■□□□□ 0.26
GGA1-222ENST00000489772 TET3O43151 1660 aa16.66■□□□□ 0.26
GGA1-222ENST00000489772 ILDR1Q86SU0 546 aaPredicted RBP16.64■□□□□ 0.26
GGA1-222ENST00000489772 EID1Q9Y6B2 187 aa16.64■□□□□ 0.26
GGA1-222ENST00000489772 IQGAP3Q86VI3 1631 aa16.64■□□□□ 0.25
GGA1-222ENST00000489772 SYNMO15061 1565 aa16.63■□□□□ 0.25
GGA1-222ENST00000489772 TXNDC2Q86VQ3 553 aa16.63■□□□□ 0.25
GGA1-222ENST00000489772 FBXO41Q8TF61 875 aa16.63■□□□□ 0.25
GGA1-222ENST00000489772 TRIM52Q96A61 297 aa16.63■□□□□ 0.25
GGA1-222ENST00000489772 CFAP65Q6ZU64 1925 aaKnown RBP16.62■□□□□ 0.25
GGA1-222ENST00000489772 NPHP4O75161 1426 aaPredicted RBP16.62■□□□□ 0.25
GGA1-222ENST00000489772 TMEM2Q9UHN6 1383 aa16.61■□□□□ 0.25
GGA1-222ENST00000489772 MED14O60244 1454 aa16.61■□□□□ 0.25
GGA1-222ENST00000489772 ZNF335Q9H4Z2 1342 aaPredicted RBP16.61■□□□□ 0.25
GGA1-222ENST00000489772 GCC2Q8IWJ2 1684 aa16.6■□□□□ 0.25
GGA1-222ENST00000489772 UBR1Q8IWV7 1749 aa16.6■□□□□ 0.25
GGA1-222ENST00000489772 LTKP29376 864 aa16.6■□□□□ 0.25
GGA1-222ENST00000489772 NEURL4Q96JN8 1562 aa16.6■□□□□ 0.25
GGA1-222ENST00000489772 PIK3C2BO00750 1634 aa16.6■□□□□ 0.25
GGA1-222ENST00000489772 SCAF11Q99590 1463 aaKnown RBP16.59■□□□□ 0.25
GGA1-222ENST00000489772 ARHGAP23Q9P227 1491 aa16.59■□□□□ 0.25
GGA1-222ENST00000489772 SLIT1O75093 1534 aa16.59■□□□□ 0.25
GGA1-222ENST00000489772 E9PCH4 1651 aa16.57■□□□□ 0.24
GGA1-222ENST00000489772 POLR1AO95602 1720 aaPredicted RBP16.57■□□□□ 0.24
GGA1-222ENST00000489772 CHGAP10645 457 aaKnown RBP16.57■□□□□ 0.24
GGA1-222ENST00000489772 ADGRB3O60242 1522 aa16.57■□□□□ 0.24
GGA1-222ENST00000489772 LTBP4Q8N2S1 1624 aa16.57■□□□□ 0.24
GGA1-222ENST00000489772 HDGFP51858 240 aaKnown RBP16.56■□□□□ 0.24
GGA1-222ENST00000489772 SLC4A1APQ9BWU0 796 aaKnown RBP16.56■□□□□ 0.24
GGA1-222ENST00000489772 KDM5AP29375 1690 aaKnown RBP16.55■□□□□ 0.24
GGA1-222ENST00000489772 ACIN1Q9UKV3 1341 aaKnown RBP16.54■□□□□ 0.24
GGA1-222ENST00000489772 PPP1R15AO75807 674 aaPredicted RBP16.52■□□□□ 0.24
GGA1-222ENST00000489772 IQGAP1P46940 1657 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms