RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 MADDQ8WXG6 1647 aa23.46■■□□□ 1.35
SMIM11A-206ENST00000489469 KDM4FA0A1W2PPD8 638 aa23.45■■□□□ 1.34
SMIM11A-206ENST00000489469 MLECQ14165 292 aa23.45■■□□□ 1.34
SMIM11A-206ENST00000489469 RNF17Q9BXT8 1623 aaKnown RBP23.44■■□□□ 1.34
SMIM11A-206ENST00000489469 KIF3BO15066 747 aa23.43■■□□□ 1.34
SMIM11A-206ENST00000489469 FAM135AQ9P2D6 1515 aa23.43■■□□□ 1.34
SMIM11A-206ENST00000489469 RIMS1Q86UR5 1692 aaKnown RBP23.41■■□□□ 1.34
SMIM11A-206ENST00000489469 ANKRD50Q9ULJ7 1429 aa23.41■■□□□ 1.34
SMIM11A-206ENST00000489469 ESF1Q9H501 851 aaKnown RBP23.4■■□□□ 1.34
SMIM11A-206ENST00000489469 GCC2Q8IWJ2 1684 aa23.4■■□□□ 1.34
SMIM11A-206ENST00000489469 CNTLNQ9NXG0 1405 aa23.4■■□□□ 1.34
SMIM11A-206ENST00000489469 GGT6Q6P531 493 aa23.39■■□□□ 1.33
SMIM11A-206ENST00000489469 DEPDC5O75140 1603 aa23.38■■□□□ 1.33
SMIM11A-206ENST00000489469 MROH2AA6NES4 1674 aa23.38■■□□□ 1.33
SMIM11A-206ENST00000489469 ZC3H13Q5T200 1668 aaKnown RBP23.36■■□□□ 1.33
SMIM11A-206ENST00000489469 CLTCQ00610 1675 aaKnown RBP23.35■■□□□ 1.33
SMIM11A-206ENST00000489469 HFM1A2PYH4 1435 aa23.34■■□□□ 1.33
SMIM11A-206ENST00000489469 PRDM15P57071 1507 aaPredicted RBP23.34■■□□□ 1.33
SMIM11A-206ENST00000489469 PTPRMP28827 1452 aa23.34■■□□□ 1.33
SMIM11A-206ENST00000489469 SCAF1Q9H7N4 1312 aaKnown RBP23.33■■□□□ 1.33
SMIM11A-206ENST00000489469 KDM5DQ9BY66 1539 aa23.33■■□□□ 1.33
SMIM11A-206ENST00000489469 MROH1Q8NDA8 1641 aa23.33■■□□□ 1.33
SMIM11A-206ENST00000489469 PPP4R3CPQ6ZMV5 832 aa23.32■■□□□ 1.32
SMIM11A-206ENST00000489469 NAIPQ13075 1403 aa23.32■■□□□ 1.32
SMIM11A-206ENST00000489469 KANK1Q14678 1352 aa23.3■■□□□ 1.32
SMIM11A-206ENST00000489469 UNC13BO14795 1591 aa23.3■■□□□ 1.32
SMIM11A-206ENST00000489469 WASHC2CQ9Y4E1 1318 aa23.29■■□□□ 1.32
SMIM11A-206ENST00000489469 C3P01024 1663 aa23.28■■□□□ 1.32
SMIM11A-206ENST00000489469 CEP152O94986 1710 aa23.28■■□□□ 1.32
SMIM11A-206ENST00000489469 ABCC3O15438 1527 aa23.27■■□□□ 1.32
SMIM11A-206ENST00000489469 SETD1BQ9UPS6 1966 aaKnown RBP23.26■■□□□ 1.31
SMIM11A-206ENST00000489469 VWDEQ8N2E2 1590 aa23.26■■□□□ 1.31
SMIM11A-206ENST00000489469 ZMYM3Q14202 1370 aa23.24■■□□□ 1.31
SMIM11A-206ENST00000489469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.23■■□□□ 1.31
SMIM11A-206ENST00000489469 LMTK2Q8IWU2 1503 aa23.23■■□□□ 1.31
SMIM11A-206ENST00000489469 CAMSAP1Q5T5Y3 1602 aa23.22■■□□□ 1.31
SMIM11A-206ENST00000489469 ACIN1Q9UKV3 1341 aaKnown RBP23.22■■□□□ 1.31
SMIM11A-206ENST00000489469 IQGAP3Q86VI3 1631 aa23.2■■□□□ 1.3
SMIM11A-206ENST00000489469 PZPP20742 1482 aa23.18■■□□□ 1.3
SMIM11A-206ENST00000489469 SETD5Q9C0A6 1442 aa23.18■■□□□ 1.3
SMIM11A-206ENST00000489469 TET3O43151 1660 aa23.18■■□□□ 1.3
SMIM11A-206ENST00000489469 NPATQ14207 1427 aa23.17■■□□□ 1.3
SMIM11A-206ENST00000489469 ARHGAP31Q2M1Z3 1444 aa23.16■■□□□ 1.3
SMIM11A-206ENST00000489469 CEBPAP49715 358 aaPredicted RBP23.16■■□□□ 1.3
SMIM11A-206ENST00000489469 TRIM26Q12899 539 aaPredicted RBP23.16■■□□□ 1.3
SMIM11A-206ENST00000489469 NUP155O75694 1391 aa23.15■■□□□ 1.3
SMIM11A-206ENST00000489469 CFAP65Q6ZU64 1925 aaKnown RBP23.15■■□□□ 1.3
SMIM11A-206ENST00000489469 EFCAB6Q5THR3 1501 aa23.14■■□□□ 1.3
SMIM11A-206ENST00000489469 PREX1Q8TCU6 1659 aa23.13■■□□□ 1.29
SMIM11A-206ENST00000489469 RPRD2Q5VT52 1461 aaKnown RBP23.11■■□□□ 1.29
SMIM11A-206ENST00000489469 SPATA31D1Q6ZQQ2 1576 aa23.09■■□□□ 1.29
SMIM11A-206ENST00000489469 TRIM52Q96A61 297 aa23.08■■□□□ 1.29
SMIM11A-206ENST00000489469 RAB3GAP2Q9H2M9 1393 aa23.08■■□□□ 1.29
SMIM11A-206ENST00000489469 ERVK-7P63135 1459 aa23.07■■□□□ 1.28
SMIM11A-206ENST00000489469 HRCP23327 699 aa23.07■■□□□ 1.28
SMIM11A-206ENST00000489469 E9PCH4 1651 aa23.06■■□□□ 1.28
SMIM11A-206ENST00000489469 UHRF1BP1Q6BDS2 1440 aa23.05■■□□□ 1.28
SMIM11A-206ENST00000489469 MYO3AQ8NEV4 1616 aa23.04■■□□□ 1.28
SMIM11A-206ENST00000489469 TNRQ92752 1358 aa23.04■■□□□ 1.28
SMIM11A-206ENST00000489469 MAPK8IP2Q13387 824 aaPredicted RBP23.03■■□□□ 1.28
SMIM11A-206ENST00000489469 FBXO31Q5XUX0 539 aaPredicted RBP23.03■■□□□ 1.28
SMIM11A-206ENST00000489469 ZNF142P52746 1687 aaPredicted RBP23.03■■□□□ 1.28
SMIM11A-206ENST00000489469 NLRP1Q9C000 1473 aa23.01■■□□□ 1.27
SMIM11A-206ENST00000489469 NOS1P29475 1434 aa22.99■■□□□ 1.27
SMIM11A-206ENST00000489469 LMTK3Q96Q04 1460 aa22.99■■□□□ 1.27
SMIM11A-206ENST00000489469 SLC4A1APQ9BWU0 796 aaKnown RBP22.99■■□□□ 1.27
SMIM11A-206ENST00000489469 SPHKAPQ2M3C7 1700 aa22.98■■□□□ 1.27
SMIM11A-206ENST00000489469 CEP170BQ9Y4F5 1589 aaPredicted RBP22.97■■□□□ 1.27
SMIM11A-206ENST00000489469 A2ML1A8K2U0 1454 aa22.96■■□□□ 1.27
SMIM11A-206ENST00000489469 SYNMO15061 1565 aa22.95■■□□□ 1.26
SMIM11A-206ENST00000489469 PKD2Q13563 968 aa22.93■■□□□ 1.26
SMIM11A-206ENST00000489469 MPHOSPH9Q99550 1183 aa22.93■■□□□ 1.26
SMIM11A-206ENST00000489469 SLC52A1Q9NWF4 448 aa22.93■■□□□ 1.26
SMIM11A-206ENST00000489469 KDM5AP29375 1690 aaKnown RBP22.92■■□□□ 1.26
SMIM11A-206ENST00000489469 PTPRTO14522 1441 aa22.91■■□□□ 1.26
SMIM11A-206ENST00000489469 PIK3C2BO00750 1634 aa22.9■■□□□ 1.26
SMIM11A-206ENST00000489469 UGGT1Q9NYU2 1555 aa22.89■■□□□ 1.26
SMIM11A-206ENST00000489469 UBR1Q8IWV7 1749 aa22.88■■□□□ 1.25
SMIM11A-206ENST00000489469 TRPM2O94759 1503 aa22.88■■□□□ 1.25
SMIM11A-206ENST00000489469 IDI1Q13907 227 aa22.85■■□□□ 1.25
SMIM11A-206ENST00000489469 THEMISQ8N1K5 641 aaPredicted RBP22.85■■□□□ 1.25
SMIM11A-206ENST00000489469 PLA2R1Q13018 1463 aa22.84■■□□□ 1.25
SMIM11A-206ENST00000489469 ADGRB3O60242 1522 aa22.83■■□□□ 1.25
SMIM11A-206ENST00000489469 KIF1BO60333 1816 aa22.83■■□□□ 1.25
SMIM11A-206ENST00000489469 HSPA2P54652 639 aa22.82■■□□□ 1.24
SMIM11A-206ENST00000489469 STAG3Q9UJ98 1225 aa22.82■■□□□ 1.24
SMIM11A-206ENST00000489469 MYO5BQ9ULV0 1848 aa22.8■■□□□ 1.24
SMIM11A-206ENST00000489469 CLTCL1P53675 1640 aa22.8■■□□□ 1.24
SMIM11A-206ENST00000489469 TMEM131LA2VDJ0 1609 aa22.79■■□□□ 1.24
SMIM11A-206ENST00000489469 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
SMIM11A-206ENST00000489469 POLR1AO95602 1720 aaPredicted RBP22.79■■□□□ 1.24
SMIM11A-206ENST00000489469 DMRT2Q9Y5R5 561 aa22.78■■□□□ 1.24
SMIM11A-206ENST00000489469 STRCQ7RTU9 1775 aa22.77■■□□□ 1.24
SMIM11A-206ENST00000489469 CCDC144AA2RUR9 1427 aa22.76■■□□□ 1.23
SMIM11A-206ENST00000489469 NCBP3Q53F19 620 aaKnown RBP22.76■■□□□ 1.23
SMIM11A-206ENST00000489469 SLIT1O75093 1534 aa22.76■■□□□ 1.23
SMIM11A-206ENST00000489469 ARHGAP23Q9P227 1491 aa22.74■■□□□ 1.23
SMIM11A-206ENST00000489469 CNKSR2Q8WXI2 1034 aa22.73■■□□□ 1.23
SMIM11A-206ENST00000489469 CHGAP10645 457 aaKnown RBP22.72■■□□□ 1.23
SMIM11A-206ENST00000489469 ANKLE2Q86XL3 938 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms