RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 LRRC9Q6ZRR7 1453 aa18.85■□□□□ 0.61
ACTN4-206ENST00000489451 ZNF335Q9H4Z2 1342 aaPredicted RBP18.83■□□□□ 0.61
ACTN4-206ENST00000489451 HSPA1LP34931 641 aa18.83■□□□□ 0.6
ACTN4-206ENST00000489451 PLA2R1Q13018 1463 aa18.83■□□□□ 0.6
ACTN4-206ENST00000489451 TCOF1Q13428 1488 aaKnown RBP18.83■□□□□ 0.6
ACTN4-206ENST00000489451 PPP6R1Q9UPN7 881 aa18.82■□□□□ 0.6
ACTN4-206ENST00000489451 NCKAP5LQ9HCH0 1330 aa18.81■□□□□ 0.6
ACTN4-206ENST00000489451 DNMT1P26358 1616 aaKnown RBP18.81■□□□□ 0.6
ACTN4-206ENST00000489451 KDM5DQ9BY66 1539 aa18.8■□□□□ 0.6
ACTN4-206ENST00000489451 KANK4Q5T7N3 995 aaPredicted RBP18.8■□□□□ 0.6
ACTN4-206ENST00000489451 MAST1Q9Y2H9 1570 aa18.79■□□□□ 0.6
ACTN4-206ENST00000489451 MAP3K1Q13233 1512 aa18.79■□□□□ 0.6
ACTN4-206ENST00000489451 KIF3BO15066 747 aa18.78■□□□□ 0.6
ACTN4-206ENST00000489451 FAM135AQ9P2D6 1515 aa18.78■□□□□ 0.6
ACTN4-206ENST00000489451 A2ML1A8K2U0 1454 aa18.77■□□□□ 0.6
ACTN4-206ENST00000489451 PZPP20742 1482 aa18.77■□□□□ 0.6
ACTN4-206ENST00000489451 PIP4K2BP78356 416 aa18.77■□□□□ 0.6
ACTN4-206ENST00000489451 RNF17Q9BXT8 1623 aaKnown RBP18.76■□□□□ 0.59
ACTN4-206ENST00000489451 RSPH4AQ5TD94 716 aa18.76■□□□□ 0.59
ACTN4-206ENST00000489451 FBXO31Q5XUX0 539 aaPredicted RBP18.76■□□□□ 0.59
ACTN4-206ENST00000489451 NEURL4Q96JN8 1562 aa18.75■□□□□ 0.59
ACTN4-206ENST00000489451 MROH1Q8NDA8 1641 aa18.74■□□□□ 0.59
ACTN4-206ENST00000489451 POLR1AO95602 1720 aaPredicted RBP18.72■□□□□ 0.59
ACTN4-206ENST00000489451 TNRQ92752 1358 aa18.72■□□□□ 0.59
ACTN4-206ENST00000489451 PKD2Q13563 968 aa18.72■□□□□ 0.59
ACTN4-206ENST00000489451 MYOM3Q5VTT5 1437 aa18.72■□□□□ 0.59
ACTN4-206ENST00000489451 ABCC3O15438 1527 aa18.7■□□□□ 0.58
ACTN4-206ENST00000489451 MIA2Q96PC5 1412 aa18.7■□□□□ 0.58
ACTN4-206ENST00000489451 EIF2AK4Q9P2K8 1649 aaKnown RBP18.7■□□□□ 0.58
ACTN4-206ENST00000489451 TOM1O60784 492 aa18.68■□□□□ 0.58
ACTN4-206ENST00000489451 TSPY4P0CV99 314 aa18.68■□□□□ 0.58
ACTN4-206ENST00000489451 TSPY10P0CW01 314 aa18.68■□□□□ 0.58
ACTN4-206ENST00000489451 ZC3H13Q5T200 1668 aaKnown RBP18.68■□□□□ 0.58
ACTN4-206ENST00000489451 WASHC2CQ9Y4E1 1318 aa18.68■□□□□ 0.58
ACTN4-206ENST00000489451 CROCC2H7BZ55 1655 aa18.67■□□□□ 0.58
ACTN4-206ENST00000489451 CEP152O94986 1710 aa18.66■□□□□ 0.58
ACTN4-206ENST00000489451 NLRP1Q9C000 1473 aa18.65■□□□□ 0.58
ACTN4-206ENST00000489451 PTPN23Q9H3S7 1636 aa18.63■□□□□ 0.57
ACTN4-206ENST00000489451 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.63■□□□□ 0.57
ACTN4-206ENST00000489451 ABCC5O15440 1437 aa18.63■□□□□ 0.57
ACTN4-206ENST00000489451 ERVK-7P63135 1459 aa18.63■□□□□ 0.57
ACTN4-206ENST00000489451 UGGT1Q9NYU2 1555 aa18.63■□□□□ 0.57
ACTN4-206ENST00000489451 DUOX2Q9NRD8 1548 aa18.62■□□□□ 0.57
ACTN4-206ENST00000489451 VWDEQ8N2E2 1590 aa18.62■□□□□ 0.57
ACTN4-206ENST00000489451 DEPDC5O75140 1603 aa18.61■□□□□ 0.57
ACTN4-206ENST00000489451 CPS1P31327 1500 aa18.61■□□□□ 0.57
ACTN4-206ENST00000489451 SHANK2Q9UPX8 1470 aa18.61■□□□□ 0.57
ACTN4-206ENST00000489451 PRDM15P57071 1507 aaPredicted RBP18.6■□□□□ 0.57
ACTN4-206ENST00000489451 MED14O60244 1454 aa18.6■□□□□ 0.57
ACTN4-206ENST00000489451 CFAP65Q6ZU64 1925 aaKnown RBP18.58■□□□□ 0.56
ACTN4-206ENST00000489451 KIF15Q9NS87 1388 aa18.57■□□□□ 0.56
ACTN4-206ENST00000489451 STRCP1A6NGW2 1772 aa18.57■□□□□ 0.56
ACTN4-206ENST00000489451 UBR1Q8IWV7 1749 aa18.57■□□□□ 0.56
ACTN4-206ENST00000489451 DAPK1P53355 1430 aa18.57■□□□□ 0.56
ACTN4-206ENST00000489451 FGD6Q6ZV73 1430 aa18.57■□□□□ 0.56
ACTN4-206ENST00000489451 IQGAP1P46940 1657 aa18.57■□□□□ 0.56
ACTN4-206ENST00000489451 SENP3Q9H4L4 574 aaPredicted RBP18.56■□□□□ 0.56
ACTN4-206ENST00000489451 NPHP4O75161 1426 aaPredicted RBP18.56■□□□□ 0.56
ACTN4-206ENST00000489451 ALKQ9UM73 1620 aa18.56■□□□□ 0.56
ACTN4-206ENST00000489451 ERBINQ96RT1 1412 aa18.55■□□□□ 0.56
ACTN4-206ENST00000489451 ANKLE2Q86XL3 938 aa18.54■□□□□ 0.56
ACTN4-206ENST00000489451 THEMISQ8N1K5 641 aaPredicted RBP18.54■□□□□ 0.56
ACTN4-206ENST00000489451 SETD1AO15047 1707 aaKnown RBP18.52■□□□□ 0.56
ACTN4-206ENST00000489451 ARHGAP31Q2M1Z3 1444 aa18.52■□□□□ 0.56
ACTN4-206ENST00000489451 RRP7BPQ9NSQ0 103 aa18.52■□□□□ 0.56
ACTN4-206ENST00000489451 RGS17Q9UGC6 210 aaPredicted RBP18.51■□□□□ 0.55
ACTN4-206ENST00000489451 ARHGAP23Q9P227 1491 aa18.49■□□□□ 0.55
ACTN4-206ENST00000489451 PIK3C2BO00750 1634 aa18.48■□□□□ 0.55
ACTN4-206ENST00000489451 SLIT1O75093 1534 aa18.48■□□□□ 0.55
ACTN4-206ENST00000489451 LMTK2Q8IWU2 1503 aa18.47■□□□□ 0.55
ACTN4-206ENST00000489451 ADGRL2O95490 1459 aa18.46■□□□□ 0.54
ACTN4-206ENST00000489451 SCAF11Q99590 1463 aaKnown RBP18.46■□□□□ 0.54
ACTN4-206ENST00000489451 LRRC7Q96NW7 1537 aa18.45■□□□□ 0.54
ACTN4-206ENST00000489451 LTKP29376 864 aa18.45■□□□□ 0.54
ACTN4-206ENST00000489451 SYNMO15061 1565 aa18.45■□□□□ 0.54
ACTN4-206ENST00000489451 CHIC2Q9UKJ5 165 aa18.44■□□□□ 0.54
ACTN4-206ENST00000489451 APLP2Q06481 763 aa18.43■□□□□ 0.54
ACTN4-206ENST00000489451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.42■□□□□ 0.54
ACTN4-206ENST00000489451 EFCAB6Q5THR3 1501 aa18.42■□□□□ 0.54
ACTN4-206ENST00000489451 XIRP1Q702N8 1843 aaKnown RBP18.42■□□□□ 0.54
ACTN4-206ENST00000489451 ANKRD30AQ9BXX3 1397 aa18.42■□□□□ 0.54
ACTN4-206ENST00000489451 KDM5AP29375 1690 aaKnown RBP18.41■□□□□ 0.54
ACTN4-206ENST00000489451 NOS1P29475 1434 aa18.4■□□□□ 0.54
ACTN4-206ENST00000489451 POTEAQ6S8J7 498 aa18.39■□□□□ 0.53
ACTN4-206ENST00000489451 TMEM2Q9UHN6 1383 aa18.37■□□□□ 0.53
ACTN4-206ENST00000489451 IDI1Q13907 227 aa18.36■□□□□ 0.53
ACTN4-206ENST00000489451 KANK1Q14678 1352 aa18.36■□□□□ 0.53
ACTN4-206ENST00000489451 TXNDC2Q86VQ3 553 aa18.36■□□□□ 0.53
ACTN4-206ENST00000489451 TET3O43151 1660 aa18.34■□□□□ 0.53
ACTN4-206ENST00000489451 ADGRB3O60242 1522 aa18.34■□□□□ 0.53
ACTN4-206ENST00000489451 ANKRD50Q9ULJ7 1429 aa18.33■□□□□ 0.53
ACTN4-206ENST00000489451 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
ACTN4-206ENST00000489451 MYO5BQ9ULV0 1848 aa18.32■□□□□ 0.52
ACTN4-206ENST00000489451 UNC13BO14795 1591 aa18.31■□□□□ 0.52
ACTN4-206ENST00000489451 RPRD2Q5VT52 1461 aaKnown RBP18.29■□□□□ 0.52
ACTN4-206ENST00000489451 GCC2Q8IWJ2 1684 aa18.28■□□□□ 0.52
ACTN4-206ENST00000489451 EID1Q9Y6B2 187 aa18.28■□□□□ 0.52
ACTN4-206ENST00000489451 NWD1Q149M9 1564 aa18.27■□□□□ 0.52
ACTN4-206ENST00000489451 ZFYVE9O95405 1425 aa18.26■□□□□ 0.51
ACTN4-206ENST00000489451 E9PCH4 1651 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms