RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 DUOX2Q9NRD8 1548 aa20.52■□□□□ 0.87
CCL28-202ENST00000489442 ANKRD30AQ9BXX3 1397 aa20.51■□□□□ 0.87
CCL28-202ENST00000489442 LMTK3Q96Q04 1460 aa20.51■□□□□ 0.87
CCL28-202ENST00000489442 WASHC2CQ9Y4E1 1318 aa20.51■□□□□ 0.87
CCL28-202ENST00000489442 EIF2AK4Q9P2K8 1649 aaKnown RBP20.48■□□□□ 0.87
CCL28-202ENST00000489442 HSPA2P54652 639 aa20.48■□□□□ 0.87
CCL28-202ENST00000489442 UHRF1BP1Q6BDS2 1440 aa20.47■□□□□ 0.87
CCL28-202ENST00000489442 KDM5DQ9BY66 1539 aa20.46■□□□□ 0.87
CCL28-202ENST00000489442 ITGAEP38570 1179 aa20.45■□□□□ 0.86
CCL28-202ENST00000489442 NCOA1Q15788 1441 aa20.45■□□□□ 0.86
CCL28-202ENST00000489442 RNF17Q9BXT8 1623 aaKnown RBP20.45■□□□□ 0.86
CCL28-202ENST00000489442 FAM135AQ9P2D6 1515 aa20.44■□□□□ 0.86
CCL28-202ENST00000489442 NPATQ14207 1427 aa20.44■□□□□ 0.86
CCL28-202ENST00000489442 ERBINQ96RT1 1412 aa20.44■□□□□ 0.86
CCL28-202ENST00000489442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.42■□□□□ 0.86
CCL28-202ENST00000489442 ADGRL2O95490 1459 aa20.41■□□□□ 0.86
CCL28-202ENST00000489442 PTPRKQ15262 1439 aa20.4■□□□□ 0.86
CCL28-202ENST00000489442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.39■□□□□ 0.85
CCL28-202ENST00000489442 ZC3H13Q5T200 1668 aaKnown RBP20.38■□□□□ 0.85
CCL28-202ENST00000489442 KANK1Q14678 1352 aa20.38■□□□□ 0.85
CCL28-202ENST00000489442 CFAP65Q6ZU64 1925 aaKnown RBP20.38■□□□□ 0.85
CCL28-202ENST00000489442 FBXO31Q5XUX0 539 aaPredicted RBP20.37■□□□□ 0.85
CCL28-202ENST00000489442 CEP152O94986 1710 aa20.37■□□□□ 0.85
CCL28-202ENST00000489442 MROH1Q8NDA8 1641 aa20.36■□□□□ 0.85
CCL28-202ENST00000489442 ABCC3O15438 1527 aa20.36■□□□□ 0.85
CCL28-202ENST00000489442 PZPP20742 1482 aa20.35■□□□□ 0.85
CCL28-202ENST00000489442 ANKRD50Q9ULJ7 1429 aa20.34■□□□□ 0.85
CCL28-202ENST00000489442 MYO3AQ8NEV4 1616 aa20.33■□□□□ 0.85
CCL28-202ENST00000489442 PRDM15P57071 1507 aaPredicted RBP20.33■□□□□ 0.85
CCL28-202ENST00000489442 RRBP1Q9P2E9 1410 aaKnown RBP20.33■□□□□ 0.84
CCL28-202ENST00000489442 ROCK1Q13464 1354 aa20.33■□□□□ 0.84
CCL28-202ENST00000489442 TNRQ92752 1358 aa20.33■□□□□ 0.84
CCL28-202ENST00000489442 DEPDC5O75140 1603 aa20.32■□□□□ 0.84
CCL28-202ENST00000489442 CAMSAP1Q5T5Y3 1602 aa20.32■□□□□ 0.84
CCL28-202ENST00000489442 DMRT2Q9Y5R5 561 aa20.29■□□□□ 0.84
CCL28-202ENST00000489442 CEP170BQ9Y4F5 1589 aaPredicted RBP20.29■□□□□ 0.84
CCL28-202ENST00000489442 ZNF142P52746 1687 aaPredicted RBP20.29■□□□□ 0.84
CCL28-202ENST00000489442 STRCQ7RTU9 1775 aa20.27■□□□□ 0.83
CCL28-202ENST00000489442 A2ML1A8K2U0 1454 aa20.26■□□□□ 0.83
CCL28-202ENST00000489442 ERVK-7P63135 1459 aa20.24■□□□□ 0.83
CCL28-202ENST00000489442 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
CCL28-202ENST00000489442 ARHGAP31Q2M1Z3 1444 aa20.23■□□□□ 0.83
CCL28-202ENST00000489442 SPATA31D1Q6ZQQ2 1576 aa20.23■□□□□ 0.83
CCL28-202ENST00000489442 NLRP1Q9C000 1473 aa20.23■□□□□ 0.83
CCL28-202ENST00000489442 VWDEQ8N2E2 1590 aa20.22■□□□□ 0.83
CCL28-202ENST00000489442 LMTK2Q8IWU2 1503 aa20.21■□□□□ 0.83
CCL28-202ENST00000489442 THEMISQ8N1K5 641 aaPredicted RBP20.21■□□□□ 0.83
CCL28-202ENST00000489442 NCKAP5LQ9HCH0 1330 aa20.2■□□□□ 0.82
CCL28-202ENST00000489442 UNC13BO14795 1591 aa20.19■□□□□ 0.82
CCL28-202ENST00000489442 UGGT1Q9NYU2 1555 aa20.18■□□□□ 0.82
CCL28-202ENST00000489442 PKD2Q13563 968 aa20.18■□□□□ 0.82
CCL28-202ENST00000489442 EFCAB6Q5THR3 1501 aa20.18■□□□□ 0.82
CCL28-202ENST00000489442 PLA2R1Q13018 1463 aa20.17■□□□□ 0.82
CCL28-202ENST00000489442 NUP155O75694 1391 aa20.17■□□□□ 0.82
CCL28-202ENST00000489442 TET3O43151 1660 aa20.16■□□□□ 0.82
CCL28-202ENST00000489442 PTPRTO14522 1441 aa20.16■□□□□ 0.82
CCL28-202ENST00000489442 STAG3Q9UJ98 1225 aa20.15■□□□□ 0.82
CCL28-202ENST00000489442 GCC2Q8IWJ2 1684 aa20.14■□□□□ 0.82
CCL28-202ENST00000489442 ANKLE2Q86XL3 938 aa20.14■□□□□ 0.81
CCL28-202ENST00000489442 NAIPQ13075 1403 aa20.12■□□□□ 0.81
CCL28-202ENST00000489442 IQGAP3Q86VI3 1631 aa20.12■□□□□ 0.81
CCL28-202ENST00000489442 POLR1AO95602 1720 aaPredicted RBP20.11■□□□□ 0.81
CCL28-202ENST00000489442 RPRD2Q5VT52 1461 aaKnown RBP20.11■□□□□ 0.81
CCL28-202ENST00000489442 UBR1Q8IWV7 1749 aa20.1■□□□□ 0.81
CCL28-202ENST00000489442 HFM1A2PYH4 1435 aa20.1■□□□□ 0.81
CCL28-202ENST00000489442 IDI1Q13907 227 aa20.09■□□□□ 0.81
CCL28-202ENST00000489442 PIK3C2BO00750 1634 aa20.08■□□□□ 0.81
CCL28-202ENST00000489442 TRIM52Q96A61 297 aa20.08■□□□□ 0.81
CCL28-202ENST00000489442 SLC52A1Q9NWF4 448 aa20.08■□□□□ 0.81
CCL28-202ENST00000489442 NOS1P29475 1434 aa20.08■□□□□ 0.8
CCL28-202ENST00000489442 SYNMO15061 1565 aa20.07■□□□□ 0.8
CCL28-202ENST00000489442 E9PCH4 1651 aa20.07■□□□□ 0.8
CCL28-202ENST00000489442 CERKQ8TCT0 537 aa20.04■□□□□ 0.8
CCL28-202ENST00000489442 EID1Q9Y6B2 187 aa20.04■□□□□ 0.8
CCL28-202ENST00000489442 TXNDC2Q86VQ3 553 aa20.02■□□□□ 0.8
CCL28-202ENST00000489442 NEURL4Q96JN8 1562 aa20.02■□□□□ 0.8
CCL28-202ENST00000489442 KDM5AP29375 1690 aaKnown RBP20.02■□□□□ 0.8
CCL28-202ENST00000489442 CHGAP10645 457 aaKnown RBP20.02■□□□□ 0.79
CCL28-202ENST00000489442 NPHP4O75161 1426 aaPredicted RBP20.01■□□□□ 0.79
CCL28-202ENST00000489442 ILDR1Q86SU0 546 aaPredicted RBP20.01■□□□□ 0.79
CCL28-202ENST00000489442 ZNF335Q9H4Z2 1342 aaPredicted RBP19.99■□□□□ 0.79
CCL28-202ENST00000489442 SCAF11Q99590 1463 aaKnown RBP19.99■□□□□ 0.79
CCL28-202ENST00000489442 TMEM2Q9UHN6 1383 aa19.99■□□□□ 0.79
CCL28-202ENST00000489442 ADGRB3O60242 1522 aa19.98■□□□□ 0.79
CCL28-202ENST00000489442 SLIT1O75093 1534 aa19.98■□□□□ 0.79
CCL28-202ENST00000489442 IQGAP1P46940 1657 aa19.98■□□□□ 0.79
CCL28-202ENST00000489442 MED14O60244 1454 aa19.98■□□□□ 0.79
CCL28-202ENST00000489442 LTKP29376 864 aa19.98■□□□□ 0.79
CCL28-202ENST00000489442 FBXO41Q8TF61 875 aa19.98■□□□□ 0.79
CCL28-202ENST00000489442 SLC4A1APQ9BWU0 796 aaKnown RBP19.98■□□□□ 0.79
CCL28-202ENST00000489442 MYO5BQ9ULV0 1848 aa19.97■□□□□ 0.79
CCL28-202ENST00000489442 ARHGAP23Q9P227 1491 aa19.97■□□□□ 0.79
CCL28-202ENST00000489442 SPHKAPQ2M3C7 1700 aa19.96■□□□□ 0.79
CCL28-202ENST00000489442 HDGFP51858 240 aaKnown RBP19.95■□□□□ 0.78
CCL28-202ENST00000489442 LTBP4Q8N2S1 1624 aa19.95■□□□□ 0.78
CCL28-202ENST00000489442 BCANQ96GW7 911 aa19.94■□□□□ 0.78
CCL28-202ENST00000489442 TMEM131LA2VDJ0 1609 aa19.92■□□□□ 0.78
CCL28-202ENST00000489442 SETD5Q9C0A6 1442 aa19.92■□□□□ 0.78
CCL28-202ENST00000489442 PPP1R15AO75807 674 aaPredicted RBP19.92■□□□□ 0.78
CCL28-202ENST00000489442 ACIN1Q9UKV3 1341 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms