RNA–Protein interactions for RNA: ENST00000489100.5

FAM107B-223, Transcript of family with sequence similarity 107 member B, human

TSL 4

Gene FAM107B, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM107B-223	ENST00000489100	MED1	Q15648	1581 aa	Predicted RBP	11.5	□□□□□ -0.57
FAM107B-223	ENST00000489100	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.49	□□□□□ -0.57
FAM107B-223	ENST00000489100	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
FAM107B-223	ENST00000489100	FAM135A	Q9P2D6	1515 aa		11.47	□□□□□ -0.57
FAM107B-223	ENST00000489100	ZNF142	P52746	1687 aa	Predicted RBP	11.46	□□□□□ -0.57
FAM107B-223	ENST00000489100	NPHP4	O75161	1426 aa	Predicted RBP	11.46	□□□□□ -0.57
FAM107B-223	ENST00000489100	DHX29	Q7Z478	1369 aa	Known RBP	11.46	□□□□□ -0.57
FAM107B-223	ENST00000489100	ZNF644	Q9H582	1327 aa	Predicted RBP	11.46	□□□□□ -0.57
FAM107B-223	ENST00000489100	TSPY4	P0CV99	314 aa		11.46	□□□□□ -0.57
FAM107B-223	ENST00000489100	TSPY10	P0CW01	314 aa		11.46	□□□□□ -0.57
FAM107B-223	ENST00000489100	PLXNC1	O60486	1568 aa		11.45	□□□□□ -0.58
FAM107B-223	ENST00000489100	CDC42BPA	Q5VT25	1732 aa		11.44	□□□□□ -0.58
FAM107B-223	ENST00000489100	RSPH4A	Q5TD94	716 aa		11.44	□□□□□ -0.58
FAM107B-223	ENST00000489100	INO80	Q9ULG1	1556 aa	Predicted RBP	11.44	□□□□□ -0.58
FAM107B-223	ENST00000489100	PZP	P20742	1482 aa		11.43	□□□□□ -0.58
FAM107B-223	ENST00000489100	NLRP1	Q9C000	1473 aa		11.43	□□□□□ -0.58
FAM107B-223	ENST00000489100	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.43	□□□□□ -0.58
FAM107B-223	ENST00000489100	MIA2	Q96PC5	1412 aa		11.43	□□□□□ -0.58
FAM107B-223	ENST00000489100	DNMT1	P26358	1616 aa	Known RBP	11.42	□□□□□ -0.58
FAM107B-223	ENST00000489100	KDM5D	Q9BY66	1539 aa		11.42	□□□□□ -0.58
FAM107B-223	ENST00000489100	UGGT1	Q9NYU2	1555 aa		11.41	□□□□□ -0.58
FAM107B-223	ENST00000489100	STAG3	Q9UJ98	1225 aa		11.41	□□□□□ -0.58
FAM107B-223	ENST00000489100	EID1	Q9Y6B2	187 aa		11.41	□□□□□ -0.58
FAM107B-223	ENST00000489100	ADGB	Q8N7X0	1667 aa		11.4	□□□□□ -0.58
FAM107B-223	ENST00000489100	CCDC141	Q6ZP82	1450 aa		11.39	□□□□□ -0.59
FAM107B-223	ENST00000489100	TXNDC2	Q86VQ3	553 aa		11.37	□□□□□ -0.59
FAM107B-223	ENST00000489100	BCAN	Q96GW7	911 aa		11.37	□□□□□ -0.59
FAM107B-223	ENST00000489100	MBD5	Q9P267	1494 aa		11.37	□□□□□ -0.59
FAM107B-223	ENST00000489100	NEURL4	Q96JN8	1562 aa		11.37	□□□□□ -0.59
FAM107B-223	ENST00000489100	CEP162	Q5TB80	1403 aa		11.36	□□□□□ -0.59
FAM107B-223	ENST00000489100	EHBP1L1	Q8N3D4	1523 aa		11.36	□□□□□ -0.59
FAM107B-223	ENST00000489100	MED14	O60244	1454 aa		11.36	□□□□□ -0.59
FAM107B-223	ENST00000489100	POLR1A	O95602	1720 aa	Predicted RBP	11.35	□□□□□ -0.59
FAM107B-223	ENST00000489100	VWDE	Q8N2E2	1590 aa		11.35	□□□□□ -0.59
FAM107B-223	ENST00000489100	LRRC7	Q96NW7	1537 aa		11.35	□□□□□ -0.59
FAM107B-223	ENST00000489100	TIAM1	Q13009	1591 aa		11.34	□□□□□ -0.59
FAM107B-223	ENST00000489100	CAMSAP2	Q08AD1	1489 aa		11.34	□□□□□ -0.59
FAM107B-223	ENST00000489100	RNF17	Q9BXT8	1623 aa	Known RBP	11.32	□□□□□ -0.6
FAM107B-223	ENST00000489100	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
FAM107B-223	ENST00000489100	SCAF11	Q99590	1463 aa	Known RBP	11.32	□□□□□ -0.6
FAM107B-223	ENST00000489100	DEPDC5	O75140	1603 aa		11.31	□□□□□ -0.6
FAM107B-223	ENST00000489100	IQGAP1	P46940	1657 aa		11.31	□□□□□ -0.6
FAM107B-223	ENST00000489100	MEX3C	Q5U5Q3	659 aa	Known RBP	11.31	□□□□□ -0.6
FAM107B-223	ENST00000489100	PROSER2	Q86WR7	435 aa	Predicted RBP	11.31	□□□□□ -0.6
FAM107B-223	ENST00000489100	SYNM	O15061	1565 aa		11.31	□□□□□ -0.6
FAM107B-223	ENST00000489100	NCOA2	Q15596	1464 aa		11.31	□□□□□ -0.6
FAM107B-223	ENST00000489100	C14orf37	Q86TY3	774 aa		11.29	□□□□□ -0.6
FAM107B-223	ENST00000489100	RGS17	Q9UGC6	210 aa	Predicted RBP	11.29	□□□□□ -0.6
FAM107B-223	ENST00000489100	ERVK-7	P63135	1459 aa		11.29	□□□□□ -0.6
FAM107B-223	ENST00000489100	KANK1	Q14678	1352 aa		11.28	□□□□□ -0.6
FAM107B-223	ENST00000489100	TMEM94	Q12767	1356 aa		11.28	□□□□□ -0.6
FAM107B-223	ENST00000489100	ABCC3	O15438	1527 aa		11.27	□□□□□ -0.61
FAM107B-223	ENST00000489100	LTK	P29376	864 aa		11.27	□□□□□ -0.61
FAM107B-223	ENST00000489100	POTEA	Q6S8J7	498 aa		11.27	□□□□□ -0.61
FAM107B-223	ENST00000489100	FAM135B	Q49AJ0	1406 aa		11.26	□□□□□ -0.61
FAM107B-223	ENST00000489100	PPP1R15A	O75807	674 aa	Predicted RBP	11.26	□□□□□ -0.61
FAM107B-223	ENST00000489100	SLC26A8	Q96RN1	970 aa		11.26	□□□□□ -0.61
FAM107B-223	ENST00000489100	MSH6	P52701	1360 aa		11.26	□□□□□ -0.61
FAM107B-223	ENST00000489100	VPS8	Q8N3P4	1428 aa		11.26	□□□□□ -0.61
FAM107B-223	ENST00000489100	KCNA6	P17658	529 aa		11.25	□□□□□ -0.61
FAM107B-223	ENST00000489100	RBM33	Q96EV2	1170 aa	Known RBP	11.25	□□□□□ -0.61
FAM107B-223	ENST00000489100	RRP7BP	Q9NSQ0	103 aa		11.25	□□□□□ -0.61
FAM107B-223	ENST00000489100	ALK	Q9UM73	1620 aa		11.24	□□□□□ -0.61
FAM107B-223	ENST00000489100	APLP2	Q06481	763 aa		11.24	□□□□□ -0.61
FAM107B-223	ENST00000489100	TMEM2	Q9UHN6	1383 aa		11.24	□□□□□ -0.61
FAM107B-223	ENST00000489100	ARHGEF5	Q12774	1597 aa		11.24	□□□□□ -0.61
FAM107B-223	ENST00000489100	HDGF	P51858	240 aa	Known RBP	11.23	□□□□□ -0.61
FAM107B-223	ENST00000489100	LRRC9	Q6ZRR7	1453 aa		11.23	□□□□□ -0.61
FAM107B-223	ENST00000489100	ZC3H13	Q5T200	1668 aa	Known RBP	11.23	□□□□□ -0.61
FAM107B-223	ENST00000489100	ZNF772	Q68DY9	489 aa	Predicted RBP	11.22	□□□□□ -0.61
FAM107B-223	ENST00000489100	TRIM52	Q96A61	297 aa		11.22	□□□□□ -0.61
FAM107B-223	ENST00000489100	KIF15	Q9NS87	1388 aa		11.22	□□□□□ -0.61
FAM107B-223	ENST00000489100	JCAD	Q9P266	1359 aa		11.22	□□□□□ -0.61
FAM107B-223	ENST00000489100	SLAIN2	Q9P270	581 aa		11.22	□□□□□ -0.61
FAM107B-223	ENST00000489100	MYOM3	Q5VTT5	1437 aa		11.21	□□□□□ -0.61
FAM107B-223	ENST00000489100	SLIT1	O75093	1534 aa		11.2	□□□□□ -0.62
FAM107B-223	ENST00000489100	MAP3K1	Q13233	1512 aa		11.2	□□□□□ -0.62
FAM107B-223	ENST00000489100	DUOX2	Q9NRD8	1548 aa		11.2	□□□□□ -0.62
FAM107B-223	ENST00000489100	MSH5	O43196	834 aa		11.2	□□□□□ -0.62
FAM107B-223	ENST00000489100	ADRA2B	P18089	450 aa		11.2	□□□□□ -0.62
FAM107B-223	ENST00000489100	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.2	□□□□□ -0.62
FAM107B-223	ENST00000489100	ARHGAP23	Q9P227	1491 aa		11.19	□□□□□ -0.62
FAM107B-223	ENST00000489100	ATF3	P18847	181 aa		11.19	□□□□□ -0.62
FAM107B-223	ENST00000489100	ARHGAP31	Q2M1Z3	1444 aa		11.18	□□□□□ -0.62
FAM107B-223	ENST00000489100	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.18	□□□□□ -0.62
FAM107B-223	ENST00000489100	LOC105371045	A0A1W2PR82	267 aa		11.18	□□□□□ -0.62
FAM107B-223	ENST00000489100	CHGA	P10645	457 aa	Known RBP	11.18	□□□□□ -0.62
FAM107B-223	ENST00000489100	IDI1	Q13907	227 aa		11.18	□□□□□ -0.62
FAM107B-223	ENST00000489100	EFCAB6	Q5THR3	1501 aa		11.18	□□□□□ -0.62
FAM107B-223	ENST00000489100	ERBIN	Q96RT1	1412 aa		11.18	□□□□□ -0.62
FAM107B-223	ENST00000489100	SPATA31A6	Q5VVP1	1343 aa		11.17	□□□□□ -0.62
FAM107B-223	ENST00000489100	RXRB	P28702	533 aa		11.17	□□□□□ -0.62
FAM107B-223	ENST00000489100	SLC52A1	Q9NWF4	448 aa		11.17	□□□□□ -0.62
FAM107B-223	ENST00000489100	CHIC2	Q9UKJ5	165 aa		11.17	□□□□□ -0.62
FAM107B-223	ENST00000489100	MAST1	Q9Y2H9	1570 aa		11.16	□□□□□ -0.62
FAM107B-223	ENST00000489100	STRCP1	A6NGW2	1772 aa		11.16	□□□□□ -0.62
FAM107B-223	ENST00000489100	UBR1	Q8IWV7	1749 aa		11.16	□□□□□ -0.62
FAM107B-223	ENST00000489100	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.16	□□□□□ -0.62
FAM107B-223	ENST00000489100	NUTM2E	B1AL46	878 aa	Predicted RBP	11.16	□□□□□ -0.62
FAM107B-223	ENST00000489100	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms