RNA–Protein interactions for RNA: ENST00000488931.1

CASQ2-202, Transcript of calsequestrin 2, humanhuman

TSL 3

Gene CASQ2, Length 220 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2-202ENST00000488931 ZNF777Q9ULD5 760 aaPredicted RBP17.45■□□□□ 0.38
CASQ2-202ENST00000488931 SPAG9O60271 1321 aaKnown RBP17.44■□□□□ 0.38
CASQ2-202ENST00000488931 DEPDC5O75140 1603 aa17.43■□□□□ 0.38
CASQ2-202ENST00000488931 HNRNPMP52272 730 aaKnown RBP eCLIP17.43■□□□□ 0.38
CASQ2-202ENST00000488931 FBXO31Q5XUX0 539 aaPredicted RBP17.43■□□□□ 0.38
CASQ2-202ENST00000488931 ZC3H13Q5T200 1668 aaKnown RBP17.42■□□□□ 0.38
CASQ2-202ENST00000488931 NPHP4O75161 1426 aaPredicted RBP17.42■□□□□ 0.38
CASQ2-202ENST00000488931 TNRQ92752 1358 aa17.4■□□□□ 0.38
CASQ2-202ENST00000488931 MED14O60244 1454 aa17.38■□□□□ 0.37
CASQ2-202ENST00000488931 UGGT1Q9NYU2 1555 aa17.38■□□□□ 0.37
CASQ2-202ENST00000488931 EEA1Q15075 1411 aa17.38■□□□□ 0.37
CASQ2-202ENST00000488931 GPATCH8Q9UKJ3 1502 aaKnown RBP17.37■□□□□ 0.37
CASQ2-202ENST00000488931 PZPP20742 1482 aa17.36■□□□□ 0.37
CASQ2-202ENST00000488931 ANKLE2Q86XL3 938 aa17.34■□□□□ 0.37
CASQ2-202ENST00000488931 ROBO1Q9Y6N7 1651 aa17.33■□□□□ 0.37
CASQ2-202ENST00000488931 KDM5DQ9BY66 1539 aa17.33■□□□□ 0.37
CASQ2-202ENST00000488931 SRCAPQ6ZRS2 3230 aa17.33■□□□□ 0.36
CASQ2-202ENST00000488931 CCDC18Q5T9S5 1454 aa17.32■□□□□ 0.36
CASQ2-202ENST00000488931 CFAP65Q6ZU64 1925 aaKnown RBP17.32■□□□□ 0.36
CASQ2-202ENST00000488931 FAM135AQ9P2D6 1515 aa17.3■□□□□ 0.36
CASQ2-202ENST00000488931 UBTFP17480 764 aaKnown RBP17.29■□□□□ 0.36
CASQ2-202ENST00000488931 UBR1Q8IWV7 1749 aa17.28■□□□□ 0.36
CASQ2-202ENST00000488931 NLRP1Q9C000 1473 aa17.27■□□□□ 0.36
CASQ2-202ENST00000488931 CASKIN1Q8WXD9 1431 aa17.27■□□□□ 0.35
CASQ2-202ENST00000488931 MIA2Q96PC5 1412 aa17.26■□□□□ 0.35
CASQ2-202ENST00000488931 KIAA1107Q9UPP5 1409 aa17.26■□□□□ 0.35
CASQ2-202ENST00000488931 ZNF644Q9H582 1327 aaPredicted RBP17.25■□□□□ 0.35
CASQ2-202ENST00000488931 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
CASQ2-202ENST00000488931 THEMISQ8N1K5 641 aaPredicted RBP17.24■□□□□ 0.35
CASQ2-202ENST00000488931 PLEKHH2Q8IVE3 1493 aa17.24■□□□□ 0.35
CASQ2-202ENST00000488931 CEP152O94986 1710 aa17.23■□□□□ 0.35
CASQ2-202ENST00000488931 TIAM1Q13009 1591 aa17.23■□□□□ 0.35
CASQ2-202ENST00000488931 UPF1Q92900 1129 aaKnown RBP eCLIP17.22■□□□□ 0.35
CASQ2-202ENST00000488931 MBD5Q9P267 1494 aa17.21■□□□□ 0.35
CASQ2-202ENST00000488931 KIF3BO15066 747 aa17.21■□□□□ 0.35
CASQ2-202ENST00000488931 DHX29Q7Z478 1369 aaKnown RBP17.2■□□□□ 0.34
CASQ2-202ENST00000488931 CHIC1Q5VXU3 224 aa17.2■□□□□ 0.34
CASQ2-202ENST00000488931 CFDP1Q9UEE9 299 aaPredicted RBP17.2■□□□□ 0.34
CASQ2-202ENST00000488931 MAP3K1Q13233 1512 aa17.2■□□□□ 0.34
CASQ2-202ENST00000488931 FYCO1Q9BQS8 1478 aa17.19■□□□□ 0.34
CASQ2-202ENST00000488931 FAM135BQ49AJ0 1406 aa17.19■□□□□ 0.34
CASQ2-202ENST00000488931 LRP6O75581 1613 aa17.18■□□□□ 0.34
CASQ2-202ENST00000488931 RBM33Q96EV2 1170 aaKnown RBP17.18■□□□□ 0.34
CASQ2-202ENST00000488931 SCAF11Q99590 1463 aaKnown RBP17.18■□□□□ 0.34
CASQ2-202ENST00000488931 CCNB3Q8WWL7 1395 aa17.17■□□□□ 0.34
CASQ2-202ENST00000488931 TRIM52Q96A61 297 aa17.17■□□□□ 0.34
CASQ2-202ENST00000488931 NCOA2Q15596 1464 aa17.17■□□□□ 0.34
CASQ2-202ENST00000488931 WASHC2CQ9Y4E1 1318 aa17.17■□□□□ 0.34
CASQ2-202ENST00000488931 ERVK-7P63135 1459 aa17.16■□□□□ 0.34
CASQ2-202ENST00000488931 ABCC3O15438 1527 aa17.16■□□□□ 0.34
CASQ2-202ENST00000488931 COL16A1Q07092 1604 aaPredicted RBP17.14■□□□□ 0.33
CASQ2-202ENST00000488931 LTKP29376 864 aa17.14■□□□□ 0.33
CASQ2-202ENST00000488931 RTEL1-TNFRSF6BF6WH68 1400 aa17.13■□□□□ 0.33
CASQ2-202ENST00000488931 MROH1Q8NDA8 1641 aa17.13■□□□□ 0.33
CASQ2-202ENST00000488931 TMEM94Q12767 1356 aa17.13■□□□□ 0.33
CASQ2-202ENST00000488931 ARHGAP23Q9P227 1491 aa17.11■□□□□ 0.33
CASQ2-202ENST00000488931 PIK3C2BO00750 1634 aa17.1■□□□□ 0.33
CASQ2-202ENST00000488931 SLIT1O75093 1534 aa17.1■□□□□ 0.33
CASQ2-202ENST00000488931 CCDC141Q6ZP82 1450 aa17.09■□□□□ 0.33
CASQ2-202ENST00000488931 CAMSAP2Q08AD1 1489 aa17.06■□□□□ 0.32
CASQ2-202ENST00000488931 JCADQ9P266 1359 aa17.05■□□□□ 0.32
CASQ2-202ENST00000488931 LRRC9Q6ZRR7 1453 aa17.05■□□□□ 0.32
CASQ2-202ENST00000488931 TXNDC2Q86VQ3 553 aa17.04■□□□□ 0.32
CASQ2-202ENST00000488931 SHPRHQ149N8 1683 aa17.04■□□□□ 0.32
CASQ2-202ENST00000488931 MTUS2Q5JR59 1369 aa17.03■□□□□ 0.32
CASQ2-202ENST00000488931 NWD1Q149M9 1564 aa17.03■□□□□ 0.32
CASQ2-202ENST00000488931 PRDM15P57071 1507 aaPredicted RBP17.02■□□□□ 0.32
CASQ2-202ENST00000488931 EHBP1L1Q8N3D4 1523 aa17.02■□□□□ 0.32
CASQ2-202ENST00000488931 KDM5AP29375 1690 aaKnown RBP17.02■□□□□ 0.32
CASQ2-202ENST00000488931 EIF2AK4Q9P2K8 1649 aaKnown RBP17■□□□□ 0.31
CASQ2-202ENST00000488931 TET3O43151 1660 aa17■□□□□ 0.31
CASQ2-202ENST00000488931 MEX3CQ5U5Q3 659 aaKnown RBP16.99■□□□□ 0.31
CASQ2-202ENST00000488931 PROSER2Q86WR7 435 aaPredicted RBP16.98■□□□□ 0.31
CASQ2-202ENST00000488931 SLC26A8Q96RN1 970 aa16.98■□□□□ 0.31
CASQ2-202ENST00000488931 SETBP1Q9Y6X0 1596 aa16.98■□□□□ 0.31
CASQ2-202ENST00000488931 RGS12O14924 1447 aa16.97■□□□□ 0.31
CASQ2-202ENST00000488931 MYO5BQ9ULV0 1848 aa16.97■□□□□ 0.31
CASQ2-202ENST00000488931 ARHGEF5Q12774 1597 aa16.97■□□□□ 0.31
CASQ2-202ENST00000488931 NKTRP30414 1462 aaKnown RBP16.96■□□□□ 0.31
CASQ2-202ENST00000488931 CHD2O14647 1828 aaKnown RBP16.96■□□□□ 0.3
CASQ2-202ENST00000488931 DIP2AQ14689 1571 aa16.95■□□□□ 0.3
CASQ2-202ENST00000488931 MSH6P52701 1360 aa16.94■□□□□ 0.3
CASQ2-202ENST00000488931 TMEM2Q9UHN6 1383 aa16.94■□□□□ 0.3
CASQ2-202ENST00000488931 ZNF772Q68DY9 489 aaPredicted RBP16.94■□□□□ 0.3
CASQ2-202ENST00000488931 AHDC1Q5TGY3 1603 aaPredicted RBP16.94■□□□□ 0.3
CASQ2-202ENST00000488931 EFCAB6Q5THR3 1501 aa16.93■□□□□ 0.3
CASQ2-202ENST00000488931 KCNA6P17658 529 aa16.93■□□□□ 0.3
CASQ2-202ENST00000488931 RXRBP28702 533 aa16.93■□□□□ 0.3
CASQ2-202ENST00000488931 SLAIN2Q9P270 581 aa16.93■□□□□ 0.3
CASQ2-202ENST00000488931 CEP162Q5TB80 1403 aa16.93■□□□□ 0.3
CASQ2-202ENST00000488931 MAST1Q9Y2H9 1570 aa16.93■□□□□ 0.3
CASQ2-202ENST00000488931 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.93■□□□□ 0.3
CASQ2-202ENST00000488931 CDK12Q9NYV4 1490 aaPredicted RBP16.93■□□□□ 0.3
CASQ2-202ENST00000488931 EP400Q96L91 3159 aa16.92■□□□□ 0.3
CASQ2-202ENST00000488931 EID1Q9Y6B2 187 aa16.92■□□□□ 0.3
CASQ2-202ENST00000488931 SPATA31A6Q5VVP1 1343 aa16.91■□□□□ 0.3
CASQ2-202ENST00000488931 FGD6Q6ZV73 1430 aa16.9■□□□□ 0.3
CASQ2-202ENST00000488931 NUTM2BA6NNL0 878 aaPredicted RBP16.9■□□□□ 0.3
CASQ2-202ENST00000488931 NUTM2EB1AL46 878 aaPredicted RBP16.9■□□□□ 0.3
CASQ2-202ENST00000488931 NUTM2AQ8IVF1 878 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms