RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 PLPPR3Q6T4P5 718 aa13.53□□□□□ -0.24
SMKR1-202ENST00000488846 CNTLNQ9NXG0 1405 aa13.53□□□□□ -0.24
SMKR1-202ENST00000488846 KIF3BO15066 747 aa13.52□□□□□ -0.25
SMKR1-202ENST00000488846 FOXD1Q16676 465 aa13.52□□□□□ -0.25
SMKR1-202ENST00000488846 RIMS1Q86UR5 1692 aaKnown RBP13.52□□□□□ -0.25
SMKR1-202ENST00000488846 MROH1Q8NDA8 1641 aa13.51□□□□□ -0.25
SMKR1-202ENST00000488846 MROH2AA6NES4 1674 aa13.5□□□□□ -0.25
SMKR1-202ENST00000488846 DEPDC5O75140 1603 aa13.5□□□□□ -0.25
SMKR1-202ENST00000488846 KDM5DQ9BY66 1539 aa13.5□□□□□ -0.25
SMKR1-202ENST00000488846 PRDM15P57071 1507 aaPredicted RBP13.49□□□□□ -0.25
SMKR1-202ENST00000488846 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
SMKR1-202ENST00000488846 GGT6Q6P531 493 aa13.49□□□□□ -0.25
SMKR1-202ENST00000488846 VWDEQ8N2E2 1590 aa13.47□□□□□ -0.25
SMKR1-202ENST00000488846 ZMYM3Q14202 1370 aa13.46□□□□□ -0.25
SMKR1-202ENST00000488846 ITGAEP38570 1179 aa13.46□□□□□ -0.25
SMKR1-202ENST00000488846 C3P01024 1663 aa13.46□□□□□ -0.26
SMKR1-202ENST00000488846 CLTCQ00610 1675 aaKnown RBP13.46□□□□□ -0.26
SMKR1-202ENST00000488846 ZC3H13Q5T200 1668 aaKnown RBP13.46□□□□□ -0.26
SMKR1-202ENST00000488846 HFM1A2PYH4 1435 aa13.46□□□□□ -0.26
SMKR1-202ENST00000488846 NAIPQ13075 1403 aa13.46□□□□□ -0.26
SMKR1-202ENST00000488846 ABCC3O15438 1527 aa13.45□□□□□ -0.26
SMKR1-202ENST00000488846 ESF1Q9H501 851 aaKnown RBP13.45□□□□□ -0.26
SMKR1-202ENST00000488846 LMTK2Q8IWU2 1503 aa13.44□□□□□ -0.26
SMKR1-202ENST00000488846 NPATQ14207 1427 aa13.44□□□□□ -0.26
SMKR1-202ENST00000488846 WASHC2CQ9Y4E1 1318 aa13.43□□□□□ -0.26
SMKR1-202ENST00000488846 UNC13BO14795 1591 aa13.43□□□□□ -0.26
SMKR1-202ENST00000488846 GCC2Q8IWJ2 1684 aa13.43□□□□□ -0.26
SMKR1-202ENST00000488846 PZPP20742 1482 aa13.42□□□□□ -0.26
SMKR1-202ENST00000488846 ARHGAP31Q2M1Z3 1444 aa13.42□□□□□ -0.26
SMKR1-202ENST00000488846 CEBPAP49715 358 aaPredicted RBP13.42□□□□□ -0.26
SMKR1-202ENST00000488846 SETD1BQ9UPS6 1966 aaKnown RBP13.41□□□□□ -0.26
SMKR1-202ENST00000488846 KANK1Q14678 1352 aa13.4□□□□□ -0.26
SMKR1-202ENST00000488846 CAMSAP1Q5T5Y3 1602 aa13.39□□□□□ -0.27
SMKR1-202ENST00000488846 CEP152O94986 1710 aa13.39□□□□□ -0.27
SMKR1-202ENST00000488846 IQGAP3Q86VI3 1631 aa13.38□□□□□ -0.27
SMKR1-202ENST00000488846 LMTK3Q96Q04 1460 aa13.37□□□□□ -0.27
SMKR1-202ENST00000488846 PREX1Q8TCU6 1659 aa13.37□□□□□ -0.27
SMKR1-202ENST00000488846 SPATA31D1Q6ZQQ2 1576 aa13.37□□□□□ -0.27
SMKR1-202ENST00000488846 EFCAB6Q5THR3 1501 aa13.36□□□□□ -0.27
SMKR1-202ENST00000488846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMKR1-202ENST00000488846 TET3O43151 1660 aa13.35□□□□□ -0.27
SMKR1-202ENST00000488846 ERVK-7P63135 1459 aa13.35□□□□□ -0.27
SMKR1-202ENST00000488846 RPRD2Q5VT52 1461 aaKnown RBP13.35□□□□□ -0.27
SMKR1-202ENST00000488846 NUP155O75694 1391 aa13.34□□□□□ -0.27
SMKR1-202ENST00000488846 FBXO31Q5XUX0 539 aaPredicted RBP13.34□□□□□ -0.27
SMKR1-202ENST00000488846 UHRF1BP1Q6BDS2 1440 aa13.33□□□□□ -0.28
SMKR1-202ENST00000488846 SETD5Q9C0A6 1442 aa13.33□□□□□ -0.28
SMKR1-202ENST00000488846 ACIN1Q9UKV3 1341 aaKnown RBP13.33□□□□□ -0.28
SMKR1-202ENST00000488846 TNRQ92752 1358 aa13.32□□□□□ -0.28
SMKR1-202ENST00000488846 NOS1P29475 1434 aa13.32□□□□□ -0.28
SMKR1-202ENST00000488846 ZNF142P52746 1687 aaPredicted RBP13.32□□□□□ -0.28
SMKR1-202ENST00000488846 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
SMKR1-202ENST00000488846 NLRP1Q9C000 1473 aa13.31□□□□□ -0.28
SMKR1-202ENST00000488846 HRCP23327 699 aa13.3□□□□□ -0.28
SMKR1-202ENST00000488846 E9PCH4 1651 aa13.3□□□□□ -0.28
SMKR1-202ENST00000488846 A2ML1A8K2U0 1454 aa13.29□□□□□ -0.28
SMKR1-202ENST00000488846 CEP170BQ9Y4F5 1589 aaPredicted RBP13.29□□□□□ -0.28
SMKR1-202ENST00000488846 RAB3GAP2Q9H2M9 1393 aa13.28□□□□□ -0.28
SMKR1-202ENST00000488846 SYNMO15061 1565 aa13.28□□□□□ -0.28
SMKR1-202ENST00000488846 PTPRTO14522 1441 aa13.26□□□□□ -0.29
SMKR1-202ENST00000488846 CFAP65Q6ZU64 1925 aaKnown RBP13.25□□□□□ -0.29
SMKR1-202ENST00000488846 SLC52A1Q9NWF4 448 aa13.25□□□□□ -0.29
SMKR1-202ENST00000488846 KDM5AP29375 1690 aaKnown RBP13.24□□□□□ -0.29
SMKR1-202ENST00000488846 PIK3C2BO00750 1634 aa13.24□□□□□ -0.29
SMKR1-202ENST00000488846 PLA2R1Q13018 1463 aa13.24□□□□□ -0.29
SMKR1-202ENST00000488846 TRIM26Q12899 539 aaPredicted RBP13.24□□□□□ -0.29
SMKR1-202ENST00000488846 UGGT1Q9NYU2 1555 aa13.24□□□□□ -0.29
SMKR1-202ENST00000488846 HSPA2P54652 639 aa13.23□□□□□ -0.29
SMKR1-202ENST00000488846 TRIM52Q96A61 297 aa13.23□□□□□ -0.29
SMKR1-202ENST00000488846 IDI1Q13907 227 aa13.22□□□□□ -0.29
SMKR1-202ENST00000488846 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
SMKR1-202ENST00000488846 STRCQ7RTU9 1775 aa13.22□□□□□ -0.29
SMKR1-202ENST00000488846 UBR1Q8IWV7 1749 aa13.22□□□□□ -0.29
SMKR1-202ENST00000488846 PKD2Q13563 968 aa13.21□□□□□ -0.29
SMKR1-202ENST00000488846 THEMISQ8N1K5 641 aaPredicted RBP13.21□□□□□ -0.29
SMKR1-202ENST00000488846 MPHOSPH9Q99550 1183 aa13.21□□□□□ -0.29
SMKR1-202ENST00000488846 SPHKAPQ2M3C7 1700 aa13.21□□□□□ -0.3
SMKR1-202ENST00000488846 TRPM2O94759 1503 aa13.2□□□□□ -0.3
SMKR1-202ENST00000488846 ARHGAP23Q9P227 1491 aa13.2□□□□□ -0.3
SMKR1-202ENST00000488846 SLIT1O75093 1534 aa13.19□□□□□ -0.3
SMKR1-202ENST00000488846 ADGRB3O60242 1522 aa13.18□□□□□ -0.3
SMKR1-202ENST00000488846 TMEM131LA2VDJ0 1609 aa13.17□□□□□ -0.3
SMKR1-202ENST00000488846 TMEM2Q9UHN6 1383 aa13.16□□□□□ -0.3
SMKR1-202ENST00000488846 MED14O60244 1454 aa13.16□□□□□ -0.3
SMKR1-202ENST00000488846 CLTCL1P53675 1640 aa13.15□□□□□ -0.3
SMKR1-202ENST00000488846 NEURL4Q96JN8 1562 aa13.15□□□□□ -0.3
SMKR1-202ENST00000488846 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
SMKR1-202ENST00000488846 ZFYVE9O95405 1425 aa13.13□□□□□ -0.31
SMKR1-202ENST00000488846 POLR1AO95602 1720 aaPredicted RBP13.13□□□□□ -0.31
SMKR1-202ENST00000488846 ANKLE2Q86XL3 938 aa13.13□□□□□ -0.31
SMKR1-202ENST00000488846 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
SMKR1-202ENST00000488846 LTKP29376 864 aa13.12□□□□□ -0.31
SMKR1-202ENST00000488846 MYO5BQ9ULV0 1848 aa13.11□□□□□ -0.31
SMKR1-202ENST00000488846 SCAF11Q99590 1463 aaKnown RBP13.11□□□□□ -0.31
SMKR1-202ENST00000488846 ANKRD30BQ9BXX2 1392 aa13.11□□□□□ -0.31
SMKR1-202ENST00000488846 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
SMKR1-202ENST00000488846 CCDC144AA2RUR9 1427 aa13.09□□□□□ -0.31
SMKR1-202ENST00000488846 KIF1BO60333 1816 aa13.09□□□□□ -0.31
SMKR1-202ENST00000488846 NPHP4O75161 1426 aaPredicted RBP13.08□□□□□ -0.32
SMKR1-202ENST00000488846 SPATA31E1Q6ZUB1 1445 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms