RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 PTPRTO14522 1441 aa30.35■■■□□ 2.45
CD55-209ENST00000488171 CAMSAP1Q5T5Y3 1602 aa30.35■■■□□ 2.45
CD55-209ENST00000488171 CERKQ8TCT0 537 aa30.33■■■□□ 2.45
CD55-209ENST00000488171 CEP170BQ9Y4F5 1589 aaPredicted RBP30.33■■■□□ 2.45
CD55-209ENST00000488171 PTPN23Q9H3S7 1636 aa30.31■■■□□ 2.44
CD55-209ENST00000488171 RNF17Q9BXT8 1623 aaKnown RBP30.3■■■□□ 2.44
CD55-209ENST00000488171 WASHC2CQ9Y4E1 1318 aa30.28■■■□□ 2.44
CD55-209ENST00000488171 PZPP20742 1482 aa30.28■■■□□ 2.44
CD55-209ENST00000488171 EIF2AK4Q9P2K8 1649 aaKnown RBP30.27■■■□□ 2.44
CD55-209ENST00000488171 CROCC2H7BZ55 1655 aa30.27■■■□□ 2.44
CD55-209ENST00000488171 ABCC5O15440 1437 aa30.26■■■□□ 2.43
CD55-209ENST00000488171 FGD6Q6ZV73 1430 aa30.26■■■□□ 2.43
CD55-209ENST00000488171 FBXO31Q5XUX0 539 aaPredicted RBP30.25■■■□□ 2.43
CD55-209ENST00000488171 PLA2R1Q13018 1463 aa30.24■■■□□ 2.43
CD55-209ENST00000488171 TCOF1Q13428 1488 aaKnown RBP30.24■■■□□ 2.43
CD55-209ENST00000488171 SHANK2Q9UPX8 1470 aa30.24■■■□□ 2.43
CD55-209ENST00000488171 A2ML1A8K2U0 1454 aa30.23■■■□□ 2.43
CD55-209ENST00000488171 DUOX2Q9NRD8 1548 aa30.22■■■□□ 2.43
CD55-209ENST00000488171 MROH1Q8NDA8 1641 aa30.22■■■□□ 2.43
CD55-209ENST00000488171 TNRQ92752 1358 aa30.21■■■□□ 2.43
CD55-209ENST00000488171 NCKAP5LQ9HCH0 1330 aa30.21■■■□□ 2.43
CD55-209ENST00000488171 DNMT1P26358 1616 aaKnown RBP30.2■■■□□ 2.43
CD55-209ENST00000488171 DAPK1P53355 1430 aa30.2■■■□□ 2.43
CD55-209ENST00000488171 ABCC3O15438 1527 aa30.2■■■□□ 2.42
CD55-209ENST00000488171 ZC3H13Q5T200 1668 aaKnown RBP30.19■■■□□ 2.42
CD55-209ENST00000488171 LTBP4Q8N2S1 1624 aa30.16■■■□□ 2.42
CD55-209ENST00000488171 KIF15Q9NS87 1388 aa30.16■■■□□ 2.42
CD55-209ENST00000488171 PKD2Q13563 968 aa30.15■■■□□ 2.42
CD55-209ENST00000488171 RRP7BPQ9NSQ0 103 aa30.13■■■□□ 2.41
CD55-209ENST00000488171 ERBINQ96RT1 1412 aa30.12■■■□□ 2.41
CD55-209ENST00000488171 CEP152O94986 1710 aa30.11■■■□□ 2.41
CD55-209ENST00000488171 NLRP1Q9C000 1473 aa30.1■■■□□ 2.41
CD55-209ENST00000488171 SPATA31D1Q6ZQQ2 1576 aa30.09■■■□□ 2.41
CD55-209ENST00000488171 PRDM15P57071 1507 aaPredicted RBP30.08■■■□□ 2.41
CD55-209ENST00000488171 ERVK-7P63135 1459 aa30.05■■■□□ 2.4
CD55-209ENST00000488171 CHIC2Q9UKJ5 165 aa30.04■■■□□ 2.4
CD55-209ENST00000488171 DEPDC5O75140 1603 aa30.04■■■□□ 2.4
CD55-209ENST00000488171 POLR1AO95602 1720 aaPredicted RBP30.04■■■□□ 2.4
CD55-209ENST00000488171 ANKRD30AQ9BXX3 1397 aa30.03■■■□□ 2.4
CD55-209ENST00000488171 UGGT1Q9NYU2 1555 aa30.03■■■□□ 2.4
CD55-209ENST00000488171 NEURL4Q96JN8 1562 aa30.03■■■□□ 2.4
CD55-209ENST00000488171 ZNF335Q9H4Z2 1342 aaPredicted RBP30.03■■■□□ 2.4
CD55-209ENST00000488171 IQSEC2Q5JU85 1478 aa30■■■□□ 2.39
CD55-209ENST00000488171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30■■■□□ 2.394e-6■■□□□ 11.8
CD55-209ENST00000488171 THEMISQ8N1K5 641 aaPredicted RBP29.99■■■□□ 2.39
CD55-209ENST00000488171 ADGRL2O95490 1459 aa29.99■■■□□ 2.39
CD55-209ENST00000488171 FAM50AQ14320 339 aaKnown RBP29.98■■■□□ 2.39
CD55-209ENST00000488171 ARHGAP31Q2M1Z3 1444 aa29.98■■■□□ 2.39
CD55-209ENST00000488171 CFAP65Q6ZU64 1925 aaKnown RBP29.95■■■□□ 2.39
CD55-209ENST00000488171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.95■■■□□ 2.39
CD55-209ENST00000488171 ANKLE2Q86XL3 938 aa29.93■■■□□ 2.38
CD55-209ENST00000488171 VWDEQ8N2E2 1590 aa29.93■■■□□ 2.38
CD55-209ENST00000488171 KANK1Q14678 1352 aa29.91■■■□□ 2.38
CD55-209ENST00000488171 LMTK2Q8IWU2 1503 aa29.9■■■□□ 2.38
CD55-209ENST00000488171 MED14O60244 1454 aa29.9■■■□□ 2.38
CD55-209ENST00000488171 UBR1Q8IWV7 1749 aa29.89■■■□□ 2.38
CD55-209ENST00000488171 NPHP4O75161 1426 aaPredicted RBP29.86■■■□□ 2.37
CD55-209ENST00000488171 ANKRD50Q9ULJ7 1429 aa29.83■■■□□ 2.37
CD55-209ENST00000488171 IQGAP1P46940 1657 aa29.82■■■□□ 2.36
CD55-209ENST00000488171 EFCAB6Q5THR3 1501 aa29.8■■■□□ 2.36
CD55-209ENST00000488171 PIK3C2BO00750 1634 aa29.79■■■□□ 2.36
CD55-209ENST00000488171 CPS1P31327 1500 aa29.79■■■□□ 2.36
CD55-209ENST00000488171 ARHGAP23Q9P227 1491 aa29.78■■■□□ 2.36
CD55-209ENST00000488171 SLIT1O75093 1534 aa29.77■■■□□ 2.36
CD55-209ENST00000488171 PPARGC1BQ86YN6 1023 aaKnown RBP29.77■■■□□ 2.36
CD55-209ENST00000488171 SYNMO15061 1565 aa29.76■■■□□ 2.35
CD55-209ENST00000488171 SCAF11Q99590 1463 aaKnown RBP29.75■■■□□ 2.35
CD55-209ENST00000488171 NOS1P29475 1434 aa29.74■■■□□ 2.35
CD55-209ENST00000488171 ROCK1Q13464 1354 aa29.73■■■□□ 2.35
CD55-209ENST00000488171 UBAP1LF5GYI3 381 aa29.73■■■□□ 2.35
CD55-209ENST00000488171 LTKP29376 864 aa29.72■■■□□ 2.35
CD55-209ENST00000488171 KDM5AP29375 1690 aaKnown RBP29.72■■■□□ 2.35
CD55-209ENST00000488171 UNC13BO14795 1591 aa29.71■■■□□ 2.35
CD55-209ENST00000488171 IDI1Q13907 227 aa29.7■■■□□ 2.35
CD55-209ENST00000488171 TXNDC2Q86VQ3 553 aa29.68■■■□□ 2.34
CD55-209ENST00000488171 RPRD2Q5VT52 1461 aaKnown RBP29.68■■■□□ 2.34
CD55-209ENST00000488171 TET3O43151 1660 aa29.68■■■□□ 2.34
CD55-209ENST00000488171 STRCP1A6NGW2 1772 aa29.68■■■□□ 2.34
CD55-209ENST00000488171 TMEM2Q9UHN6 1383 aa29.67■■■□□ 2.34
CD55-209ENST00000488171 STAG3Q9UJ98 1225 aa29.64■■■□□ 2.34
CD55-209ENST00000488171 EID1Q9Y6B2 187 aa29.64■■■□□ 2.33
CD55-209ENST00000488171 GCC2Q8IWJ2 1684 aa29.63■■■□□ 2.33
CD55-209ENST00000488171 ADGRB3O60242 1522 aa29.63■■■□□ 2.33
CD55-209ENST00000488171 ITGAEP38570 1179 aa29.63■■■□□ 2.33
CD55-209ENST00000488171 SLC52A1Q9NWF4 448 aa29.61■■■□□ 2.33
CD55-209ENST00000488171 LRRC7Q96NW7 1537 aa29.58■■■□□ 2.33
CD55-209ENST00000488171 IQGAP3Q86VI3 1631 aa29.58■■■□□ 2.33
CD55-209ENST00000488171 E9PCH4 1651 aa29.57■■■□□ 2.32
CD55-209ENST00000488171 RRBP1Q9P2E9 1410 aaKnown RBP29.55■■■□□ 2.32
CD55-209ENST00000488171 TOM1O60784 492 aa29.55■■■□□ 2.32
CD55-209ENST00000488171 ALKQ9UM73 1620 aa29.55■■■□□ 2.32
CD55-209ENST00000488171 PIP4K2BP78356 416 aa29.51■■■□□ 2.31
CD55-209ENST00000488171 TMEM131LA2VDJ0 1609 aa29.5■■■□□ 2.31
CD55-209ENST00000488171 MYO5BQ9ULV0 1848 aa29.5■■■□□ 2.31
CD55-209ENST00000488171 NUP155O75694 1391 aa29.5■■■□□ 2.31
CD55-209ENST00000488171 SCAF1Q9H7N4 1312 aaKnown RBP29.48■■■□□ 2.31
CD55-209ENST00000488171 DISP3Q9P2K9 1392 aa29.48■■■□□ 2.31
CD55-209ENST00000488171 ZFYVE9O95405 1425 aa29.47■■■□□ 2.31
CD55-209ENST00000488171 XIRP1Q702N8 1843 aaKnown RBP29.44■■■□□ 2.3
CD55-209ENST00000488171 SLC26A8Q96RN1 970 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms