RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 RICTORQ6R327 1708 aa19.64■□□□□ 0.73
COPS7B-221ENST00000488111 HECW2Q9P2P5 1572 aa19.63■□□□□ 0.73
COPS7B-221ENST00000488111 FRMPD1Q5SYB0 1578 aa19.62■□□□□ 0.73
COPS7B-221ENST00000488111 ERBINQ96RT1 1412 aa19.62■□□□□ 0.73
COPS7B-221ENST00000488111 DHX29Q7Z478 1369 aaKnown RBP19.62■□□□□ 0.73
COPS7B-221ENST00000488111 SIN3AQ96ST3 1273 aa19.62■□□□□ 0.73
COPS7B-221ENST00000488111 SUPT16HQ9Y5B9 1047 aaKnown RBP19.62■□□□□ 0.73
COPS7B-221ENST00000488111 KIF3BO15066 747 aa19.61■□□□□ 0.73
COPS7B-221ENST00000488111 YEATS2Q9ULM3 1422 aa19.61■□□□□ 0.73
COPS7B-221ENST00000488111 PZPP20742 1482 aa19.59■□□□□ 0.73
COPS7B-221ENST00000488111 A2MP01023 1474 aa19.58■□□□□ 0.73
COPS7B-221ENST00000488111 ANP32EQ9BTT0 268 aa19.58■□□□□ 0.72
COPS7B-221ENST00000488111 ABCA6Q8N139 1617 aa19.57■□□□□ 0.72
COPS7B-221ENST00000488111 PKD2Q13563 968 aa19.57■□□□□ 0.72
COPS7B-221ENST00000488111 DIP2CQ9Y2E4 1556 aa19.53■□□□□ 0.72
COPS7B-221ENST00000488111 TSHZ2Q9NRE2 1034 aa19.53■□□□□ 0.72
COPS7B-221ENST00000488111 ZMYM4Q5VZL5 1548 aa19.53■□□□□ 0.72
COPS7B-221ENST00000488111 GGT6Q6P531 493 aa19.52■□□□□ 0.72
COPS7B-221ENST00000488111 UNC13BO14795 1591 aa19.51■□□□□ 0.71
COPS7B-221ENST00000488111 FAM135AQ9P2D6 1515 aa19.51■□□□□ 0.71
COPS7B-221ENST00000488111 KDM5DQ9BY66 1539 aa19.51■□□□□ 0.71
COPS7B-221ENST00000488111 MAGI2Q86UL8 1455 aa19.49■□□□□ 0.71
COPS7B-221ENST00000488111 ATP10AO60312 1499 aa19.47■□□□□ 0.71
COPS7B-221ENST00000488111 BCL11AQ9H165 835 aa19.47■□□□□ 0.71
COPS7B-221ENST00000488111 ANKRD30BQ9BXX2 1392 aa19.47■□□□□ 0.71
COPS7B-221ENST00000488111 EIF2AK4Q9P2K8 1649 aaKnown RBP19.46■□□□□ 0.71
COPS7B-221ENST00000488111 KANK1Q14678 1352 aa19.45■□□□□ 0.7
COPS7B-221ENST00000488111 IQGAP3Q86VI3 1631 aa19.44■□□□□ 0.7
COPS7B-221ENST00000488111 DEPDC5O75140 1603 aa19.43■□□□□ 0.7
COPS7B-221ENST00000488111 MROH1Q8NDA8 1641 aa19.43■□□□□ 0.7
COPS7B-221ENST00000488111 MLECQ14165 292 aa19.41■□□□□ 0.7
COPS7B-221ENST00000488111 PRDM15P57071 1507 aaPredicted RBP19.4■□□□□ 0.7
COPS7B-221ENST00000488111 WASHC2CQ9Y4E1 1318 aa19.4■□□□□ 0.7
COPS7B-221ENST00000488111 ARHGEF40Q8TER5 1519 aa19.39■□□□□ 0.69
COPS7B-221ENST00000488111 VWDEQ8N2E2 1590 aa19.38■□□□□ 0.69
COPS7B-221ENST00000488111 RNF17Q9BXT8 1623 aaKnown RBP19.38■□□□□ 0.69
COPS7B-221ENST00000488111 TONSLQ96HA7 1378 aa19.38■□□□□ 0.69
COPS7B-221ENST00000488111 ARID4BQ4LE39 1312 aaPredicted RBP19.37■□□□□ 0.69
COPS7B-221ENST00000488111 SIGLEC1Q9BZZ2 1709 aa19.36■□□□□ 0.69
COPS7B-221ENST00000488111 BCORL1Q5H9F3 1711 aa19.35■□□□□ 0.69
COPS7B-221ENST00000488111 PLA2R1Q13018 1463 aa19.34■□□□□ 0.69
COPS7B-221ENST00000488111 REREQ9P2R6 1566 aa19.33■□□□□ 0.69
COPS7B-221ENST00000488111 RPRD2Q5VT52 1461 aaKnown RBP19.33■□□□□ 0.69
COPS7B-221ENST00000488111 TIMELESSQ9UNS1 1208 aa19.33■□□□□ 0.68
COPS7B-221ENST00000488111 CEP152O94986 1710 aa19.32■□□□□ 0.68
COPS7B-221ENST00000488111 E9PCH4 1651 aa19.32■□□□□ 0.68
COPS7B-221ENST00000488111 AGLP35573 1532 aa19.32■□□□□ 0.68
COPS7B-221ENST00000488111 TET3O43151 1660 aa19.32■□□□□ 0.68
COPS7B-221ENST00000488111 L3MBTL2Q969R5 705 aa19.31■□□□□ 0.68
COPS7B-221ENST00000488111 ABCC3O15438 1527 aa19.31■□□□□ 0.68
COPS7B-221ENST00000488111 LMTK2Q8IWU2 1503 aa19.3■□□□□ 0.68
COPS7B-221ENST00000488111 CCDC144AA2RUR9 1427 aa19.3■□□□□ 0.68
COPS7B-221ENST00000488111 PPP1R15AO75807 674 aaPredicted RBP19.29■□□□□ 0.68
COPS7B-221ENST00000488111 EFCAB6Q5THR3 1501 aa19.28■□□□□ 0.68
COPS7B-221ENST00000488111 NPATQ14207 1427 aa19.28■□□□□ 0.68
COPS7B-221ENST00000488111 RGL3Q3MIN7 710 aa19.26■□□□□ 0.67
COPS7B-221ENST00000488111 PTPRTO14522 1441 aa19.25■□□□□ 0.67
COPS7B-221ENST00000488111 ESF1Q9H501 851 aaKnown RBP19.24■□□□□ 0.67
COPS7B-221ENST00000488111 PPP6R1Q9UPN7 881 aa19.23■□□□□ 0.67
COPS7B-221ENST00000488111 CAMSAP1Q5T5Y3 1602 aa19.22■□□□□ 0.67
COPS7B-221ENST00000488111 CFAP65Q6ZU64 1925 aaKnown RBP19.22■□□□□ 0.67
COPS7B-221ENST00000488111 FBXO31Q5XUX0 539 aaPredicted RBP19.21■□□□□ 0.67
COPS7B-221ENST00000488111 TRPM2O94759 1503 aa19.21■□□□□ 0.67
COPS7B-221ENST00000488111 SPHKAPQ2M3C7 1700 aa19.2■□□□□ 0.66
COPS7B-221ENST00000488111 UGGT1Q9NYU2 1555 aa19.2■□□□□ 0.66
COPS7B-221ENST00000488111 KDM2AQ9Y2K7 1162 aa19.2■□□□□ 0.66
COPS7B-221ENST00000488111 ZC3H13Q5T200 1668 aaKnown RBP19.19■□□□□ 0.66
COPS7B-221ENST00000488111 ZNF326Q5BKZ1 582 aaKnown RBP19.19■□□□□ 0.66
COPS7B-221ENST00000488111 DCAF11Q8TEB1 546 aa19.19■□□□□ 0.66
COPS7B-221ENST00000488111 CLTCQ00610 1675 aaKnown RBP19.18■□□□□ 0.66
COPS7B-221ENST00000488111 ARHGAP31Q2M1Z3 1444 aa19.18■□□□□ 0.66
COPS7B-221ENST00000488111 CLTCL1P53675 1640 aa19.17■□□□□ 0.66
COPS7B-221ENST00000488111 CHGAP10645 457 aaKnown RBP19.17■□□□□ 0.66
COPS7B-221ENST00000488111 NBPF8Q3BBV2 869 aa19.17■□□□□ 0.66
COPS7B-221ENST00000488111 NOS1P29475 1434 aa19.15■□□□□ 0.66
COPS7B-221ENST00000488111 ZMYM3Q14202 1370 aa19.15■□□□□ 0.66
COPS7B-221ENST00000488111 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.66
COPS7B-221ENST00000488111 CNTLNQ9NXG0 1405 aa19.14■□□□□ 0.65
COPS7B-221ENST00000488111 SPATA31E1Q6ZUB1 1445 aa19.13■□□□□ 0.65
COPS7B-221ENST00000488111 IDI1Q13907 227 aa19.12■□□□□ 0.65
COPS7B-221ENST00000488111 CEBPAP49715 358 aaPredicted RBP19.12■□□□□ 0.65
COPS7B-221ENST00000488111 SYNMO15061 1565 aa19.1■□□□□ 0.65
COPS7B-221ENST00000488111 ERVK-7P63135 1459 aa19.09■□□□□ 0.65
COPS7B-221ENST00000488111 PREX1Q8TCU6 1659 aa19.08■□□□□ 0.65
COPS7B-221ENST00000488111 SLC52A1Q9NWF4 448 aa19.07■□□□□ 0.64
COPS7B-221ENST00000488111 HIRIP3Q9BW71 556 aaPredicted RBP19.07■□□□□ 0.64
COPS7B-221ENST00000488111 RBM19Q9Y4C8 960 aaKnown RBP19.05■□□□□ 0.64
COPS7B-221ENST00000488111 FKBP8Q14318 412 aa19.04■□□□□ 0.64
COPS7B-221ENST00000488111 BCANQ96GW7 911 aa19.04■□□□□ 0.64
COPS7B-221ENST00000488111 KIF1BO60333 1816 aa19.03■□□□□ 0.64
COPS7B-221ENST00000488111 NUTM2DQ5VT03 806 aaPredicted RBP19.03■□□□□ 0.64
COPS7B-221ENST00000488111 MROH2AA6NES4 1674 aa19.02■□□□□ 0.64
COPS7B-221ENST00000488111 PIK3C2BO00750 1634 aa19.02■□□□□ 0.64
COPS7B-221ENST00000488111 SPATA31D1Q6ZQQ2 1576 aa19.02■□□□□ 0.64
COPS7B-221ENST00000488111 UHRF1BP1Q6BDS2 1440 aa19.02■□□□□ 0.64
COPS7B-221ENST00000488111 STAG3Q9UJ98 1225 aa19.02■□□□□ 0.64
COPS7B-221ENST00000488111 FER1L4A9Z1Z3 1794 aa19.01■□□□□ 0.63
COPS7B-221ENST00000488111 ADGRB3O60242 1522 aa19.01■□□□□ 0.63
COPS7B-221ENST00000488111 PRAG1Q86YV5 1406 aa19.01■□□□□ 0.63
COPS7B-221ENST00000488111 TNRQ92752 1358 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms