RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 ARID3CA6NKF2 412 aa12.77□□□□□ -0.37
NECTIN3-209ENST00000488016 NLRP6P59044 892 aa12.77□□□□□ -0.37
NECTIN3-209ENST00000488016 UACAQ9BZF9 1416 aa12.77□□□□□ -0.37
NECTIN3-209ENST00000488016 ABCC2Q92887 1545 aa12.77□□□□□ -0.37
NECTIN3-209ENST00000488016 ABCA8O94911 1581 aa12.74□□□□□ -0.37
NECTIN3-209ENST00000488016 SNPHO15079 494 aa12.73□□□□□ -0.37
NECTIN3-209ENST00000488016 FAM69CQ0P6D2 419 aa12.73□□□□□ -0.37
NECTIN3-209ENST00000488016 UHRF1BP1LA0JNW5 1464 aa12.72□□□□□ -0.37
NECTIN3-209ENST00000488016 MS4A4AQ96JQ5 239 aa12.72□□□□□ -0.37
NECTIN3-209ENST00000488016 ZCCHC11Q5TAX3 1644 aaKnown RBP12.72□□□□□ -0.37
NECTIN3-209ENST00000488016 ARHGAP35Q9NRY4 1499 aa12.72□□□□□ -0.37
NECTIN3-209ENST00000488016 POTEMA6NI47 508 aa12.71□□□□□ -0.37
NECTIN3-209ENST00000488016 MAPKBP1O60336 1514 aa12.71□□□□□ -0.38
NECTIN3-209ENST00000488016 LOC105371045A0A1W2PR82 267 aa12.7□□□□□ -0.38
NECTIN3-209ENST00000488016 POTEGQ6S5H5 508 aa12.7□□□□□ -0.38
NECTIN3-209ENST00000488016 TMEM121BQ9BXQ6 578 aaPredicted RBP12.7□□□□□ -0.38
NECTIN3-209ENST00000488016 EFCAB5A4FU69 1503 aa12.69□□□□□ -0.38
NECTIN3-209ENST00000488016 KDM5BQ9UGL1 1544 aa12.69□□□□□ -0.38
NECTIN3-209ENST00000488016 MICALL2Q8IY33 904 aa12.69□□□□□ -0.38
NECTIN3-209ENST00000488016 ASXL2Q76L83 1435 aa12.69□□□□□ -0.38
NECTIN3-209ENST00000488016 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
NECTIN3-209ENST00000488016 FBXO22Q8NEZ5 403 aa12.68□□□□□ -0.38
NECTIN3-209ENST00000488016 MFRPQ9BY79 579 aa12.68□□□□□ -0.38
NECTIN3-209ENST00000488016 ABCC10Q5T3U5 1492 aa12.67□□□□□ -0.38
NECTIN3-209ENST00000488016 RAPGEF6Q8TEU7 1601 aa12.67□□□□□ -0.38
NECTIN3-209ENST00000488016 LCE2DQ5TA82 110 aaPredicted RBP12.67□□□□□ -0.38
NECTIN3-209ENST00000488016 HS6ST3Q8IZP7 471 aa12.66□□□□□ -0.38
NECTIN3-209ENST00000488016 NUP153P49790 1475 aaKnown RBP12.65□□□□□ -0.38
NECTIN3-209ENST00000488016 KDM6BO15054 1643 aa12.64□□□□□ -0.39
NECTIN3-209ENST00000488016 CHGAP10645 457 aaKnown RBP12.64□□□□□ -0.39
NECTIN3-209ENST00000488016 ATP10BO94823 1461 aa12.64□□□□□ -0.39
NECTIN3-209ENST00000488016 TSPOAP1O95153 1857 aa12.62□□□□□ -0.39
NECTIN3-209ENST00000488016 ST18O60284 1047 aa12.62□□□□□ -0.39
NECTIN3-209ENST00000488016 CDK13Q14004 1512 aaKnown RBP12.62□□□□□ -0.39
NECTIN3-209ENST00000488016 CLIP1P30622 1438 aa12.62□□□□□ -0.39
NECTIN3-209ENST00000488016 WDR7Q9Y4E6 1490 aa12.61□□□□□ -0.39
NECTIN3-209ENST00000488016 EPRSP07814 1512 aaKnown RBP12.61□□□□□ -0.39
NECTIN3-209ENST00000488016 KCNH8Q96L42 1107 aa12.6□□□□□ -0.39
NECTIN3-209ENST00000488016 ATP1B4Q9UN42 357 aaPredicted RBP12.6□□□□□ -0.39
NECTIN3-209ENST00000488016 CEP162Q5TB80 1403 aa12.59□□□□□ -0.39
NECTIN3-209ENST00000488016 PCF11O94913 1555 aaKnown RBP12.59□□□□□ -0.39
NECTIN3-209ENST00000488016 LRRIQ1Q96JM4 1722 aa12.58□□□□□ -0.4
NECTIN3-209ENST00000488016 HECW2Q9P2P5 1572 aa12.58□□□□□ -0.4
NECTIN3-209ENST00000488016 PPRC1Q5VV67 1664 aaKnown RBP12.57□□□□□ -0.4
NECTIN3-209ENST00000488016 FMN1Q68DA7 1419 aa12.56□□□□□ -0.4
NECTIN3-209ENST00000488016 ADGRL1O94910 1474 aa12.56□□□□□ -0.4
NECTIN3-209ENST00000488016 GLI2P10070 1586 aa12.56□□□□□ -0.4
NECTIN3-209ENST00000488016 HECW1Q76N89 1606 aa12.55□□□□□ -0.4
NECTIN3-209ENST00000488016 MAP3K4Q9Y6R4 1608 aa12.54□□□□□ -0.4
NECTIN3-209ENST00000488016 TMEM92Q6UXU6 159 aa12.53□□□□□ -0.4
NECTIN3-209ENST00000488016 DOK7Q18PE1 504 aa12.52□□□□□ -0.41
NECTIN3-209ENST00000488016 FBXO41Q8TF61 875 aa12.52□□□□□ -0.41
NECTIN3-209ENST00000488016 PCDH10Q9P2E7 1040 aa12.52□□□□□ -0.41
NECTIN3-209ENST00000488016 ZNF710Q8N1W2 664 aa12.51□□□□□ -0.41
NECTIN3-209ENST00000488016 CASKIN1Q8WXD9 1431 aa12.51□□□□□ -0.41
NECTIN3-209ENST00000488016 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
NECTIN3-209ENST00000488016 CFAP43Q8NDM7 1665 aa12.48□□□□□ -0.41
NECTIN3-209ENST00000488016 TTC37Q6PGP7 1564 aa12.48□□□□□ -0.41
NECTIN3-209ENST00000488016 MAGI3Q5TCQ9 1506 aa12.48□□□□□ -0.41
NECTIN3-209ENST00000488016 CD109Q6YHK3 1445 aa12.48□□□□□ -0.41
NECTIN3-209ENST00000488016 RIMBP2O15034 1052 aa12.48□□□□□ -0.41
NECTIN3-209ENST00000488016 HOXB3P14651 431 aaPredicted RBP12.48□□□□□ -0.41
NECTIN3-209ENST00000488016 MARVELD3Q96A59 401 aa12.48□□□□□ -0.41
NECTIN3-209ENST00000488016 KIF14Q15058 1648 aa12.48□□□□□ -0.41
NECTIN3-209ENST00000488016 FYCO1Q9BQS8 1478 aa12.47□□□□□ -0.41
NECTIN3-209ENST00000488016 COL17A1Q9UMD9 1497 aaPredicted RBP12.47□□□□□ -0.41
NECTIN3-209ENST00000488016 ABCA9Q8IUA7 1624 aa12.47□□□□□ -0.41
NECTIN3-209ENST00000488016 PLEKHD1A6NEE1 506 aa12.46□□□□□ -0.41
NECTIN3-209ENST00000488016 PPP1R37O75864 691 aa12.46□□□□□ -0.41
NECTIN3-209ENST00000488016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.46□□□□□ -0.42
NECTIN3-209ENST00000488016 EMP3P54852 163 aa12.45□□□□□ -0.42
NECTIN3-209ENST00000488016 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
NECTIN3-209ENST00000488016 NKX1-1Q15270 411 aaPredicted RBP12.43□□□□□ -0.42
NECTIN3-209ENST00000488016 CCDC18Q5T9S5 1454 aa12.42□□□□□ -0.42
NECTIN3-209ENST00000488016 TMC2Q8TDI7 906 aa12.42□□□□□ -0.42
NECTIN3-209ENST00000488016 TROQ12816 1431 aaPredicted RBP12.42□□□□□ -0.42
NECTIN3-209ENST00000488016 TEX14Q8IWB6 1497 aa12.41□□□□□ -0.42
NECTIN3-209ENST00000488016 CDAN1Q8IWY9 1227 aa12.41□□□□□ -0.42
NECTIN3-209ENST00000488016 VPS8Q8N3P4 1428 aa12.4□□□□□ -0.42
NECTIN3-209ENST00000488016 C2orf72A6NCS6 295 aa12.39□□□□□ -0.43
NECTIN3-209ENST00000488016 ZSWIM6Q9HCJ5 1215 aa12.39□□□□□ -0.43
NECTIN3-209ENST00000488016 PLSCR2Q9NRY7 297 aa12.39□□□□□ -0.43
NECTIN3-209ENST00000488016 KIF3CO14782 793 aa12.38□□□□□ -0.43
NECTIN3-209ENST00000488016 HOXB1P14653 301 aaPredicted RBP12.38□□□□□ -0.43
NECTIN3-209ENST00000488016 CDK11AQ9UQ88 783 aaPredicted RBP12.37□□□□□ -0.43
NECTIN3-209ENST00000488016 LMTK3Q96Q04 1460 aa12.37□□□□□ -0.43
NECTIN3-209ENST00000488016 FANCAO15360 1455 aa12.35□□□□□ -0.43
NECTIN3-209ENST00000488016 MYO5CQ9NQX4 1742 aa12.35□□□□□ -0.43
NECTIN3-209ENST00000488016 FAM205CA6NFA0 338 aa12.35□□□□□ -0.43
NECTIN3-209ENST00000488016 RAPGEF3O95398 923 aa12.34□□□□□ -0.43
NECTIN3-209ENST00000488016 ILDR2Q71H61 639 aa12.34□□□□□ -0.43
NECTIN3-209ENST00000488016 PLCH2O75038 1416 aa12.34□□□□□ -0.43
NECTIN3-209ENST00000488016 TIAM1Q13009 1591 aa12.34□□□□□ -0.43
NECTIN3-209ENST00000488016 FRMPD1Q5SYB0 1578 aa12.34□□□□□ -0.43
NECTIN3-209ENST00000488016 NEO1Q92859 1461 aa12.34□□□□□ -0.43
NECTIN3-209ENST00000488016 MTUS2Q5JR59 1369 aa12.33□□□□□ -0.44
NECTIN3-209ENST00000488016 AKNAQ7Z591 1439 aa12.33□□□□□ -0.44
NECTIN3-209ENST00000488016 CDC42BPBQ9Y5S2 1711 aa12.33□□□□□ -0.44
NECTIN3-209ENST00000488016 ARHGAP5Q13017 1502 aa12.32□□□□□ -0.44
NECTIN3-209ENST00000488016 CDC42BPAQ5VT25 1732 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms