RNA–Protein interactions for RNA: ENST00000487942.1

SCAP-212, Transcript of SREBF chaperone, humanhuman

TSL 3

Gene SCAP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-212ENST00000487942 C3P01024 1663 aa11.98□□□□□ -0.49
SCAP-212ENST00000487942 INO80Q9ULG1 1556 aaPredicted RBP11.97□□□□□ -0.49
SCAP-212ENST00000487942 CCNB3Q8WWL7 1395 aa11.97□□□□□ -0.49
SCAP-212ENST00000487942 HNRNPMP52272 730 aaKnown RBP eCLIP11.97□□□□□ -0.49
SCAP-212ENST00000487942 SETD1BQ9UPS6 1966 aaKnown RBP11.97□□□□□ -0.49
SCAP-212ENST00000487942 PREX1Q8TCU6 1659 aa11.97□□□□□ -0.49
SCAP-212ENST00000487942 ATP7AQ04656 1500 aa11.96□□□□□ -0.5
SCAP-212ENST00000487942 ZNF644Q9H582 1327 aaPredicted RBP11.95□□□□□ -0.5
SCAP-212ENST00000487942 CEBPAP49715 358 aaPredicted RBP11.95□□□□□ -0.5
SCAP-212ENST00000487942 CFDP1Q9UEE9 299 aaPredicted RBP11.95□□□□□ -0.5
SCAP-212ENST00000487942 AGLP35573 1532 aa11.95□□□□□ -0.5
SCAP-212ENST00000487942 ADGBQ8N7X0 1667 aa11.94□□□□□ -0.5
SCAP-212ENST00000487942 HSPA2P54652 639 aa11.94□□□□□ -0.5
SCAP-212ENST00000487942 NCOA2Q15596 1464 aa11.93□□□□□ -0.5
SCAP-212ENST00000487942 PLEKHH2Q8IVE3 1493 aa11.93□□□□□ -0.5
SCAP-212ENST00000487942 VPS8Q8N3P4 1428 aa11.93□□□□□ -0.5
SCAP-212ENST00000487942 KIAA1107Q9UPP5 1409 aa11.93□□□□□ -0.5
SCAP-212ENST00000487942 CLTCQ00610 1675 aaKnown RBP11.92□□□□□ -0.5
SCAP-212ENST00000487942 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
SCAP-212ENST00000487942 ILDR1Q86SU0 546 aaPredicted RBP11.92□□□□□ -0.5
SCAP-212ENST00000487942 PLXNC1O60486 1568 aa11.92□□□□□ -0.5
SCAP-212ENST00000487942 SPAG9O60271 1321 aaKnown RBP11.91□□□□□ -0.5
SCAP-212ENST00000487942 MBD5Q9P267 1494 aa11.91□□□□□ -0.5
SCAP-212ENST00000487942 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
SCAP-212ENST00000487942 STRCQ7RTU9 1775 aa11.91□□□□□ -0.5
SCAP-212ENST00000487942 MROH2AA6NES4 1674 aa11.91□□□□□ -0.5
SCAP-212ENST00000487942 CAMSAP2Q08AD1 1489 aa11.89□□□□□ -0.51
SCAP-212ENST00000487942 LRRC9Q6ZRR7 1453 aa11.89□□□□□ -0.51
SCAP-212ENST00000487942 HAX1O00165 279 aa11.88□□□□□ -0.51
SCAP-212ENST00000487942 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
SCAP-212ENST00000487942 A2MP01023 1474 aa11.88□□□□□ -0.51
SCAP-212ENST00000487942 KANK4Q5T7N3 995 aaPredicted RBP11.87□□□□□ -0.51
SCAP-212ENST00000487942 CHADLQ6NUI6 762 aa11.86□□□□□ -0.51
SCAP-212ENST00000487942 MAP3K1Q13233 1512 aa11.85□□□□□ -0.51
SCAP-212ENST00000487942 ARHGEF5Q12774 1597 aa11.84□□□□□ -0.51
SCAP-212ENST00000487942 CCDC141Q6ZP82 1450 aa11.84□□□□□ -0.51
SCAP-212ENST00000487942 RTEL1-TNFRSF6BF6WH68 1400 aa11.83□□□□□ -0.52
SCAP-212ENST00000487942 UHRF1BP1Q6BDS2 1440 aa11.83□□□□□ -0.52
SCAP-212ENST00000487942 CNTLNQ9NXG0 1405 aa11.83□□□□□ -0.52
SCAP-212ENST00000487942 CFAP65Q6ZU64 1925 aaKnown RBP11.82□□□□□ -0.52
SCAP-212ENST00000487942 ESF1Q9H501 851 aaKnown RBP11.82□□□□□ -0.52
SCAP-212ENST00000487942 GGT6Q6P531 493 aa11.81□□□□□ -0.52
SCAP-212ENST00000487942 SP7Q8TDD2 431 aaPredicted RBP11.81□□□□□ -0.52
SCAP-212ENST00000487942 MYO3AQ8NEV4 1616 aa11.81□□□□□ -0.52
SCAP-212ENST00000487942 CROCC2H7BZ55 1655 aa11.81□□□□□ -0.52
SCAP-212ENST00000487942 ZMYM3Q14202 1370 aa11.8□□□□□ -0.52
SCAP-212ENST00000487942 EVX2Q03828 476 aa11.8□□□□□ -0.52
SCAP-212ENST00000487942 ZNF142P52746 1687 aaPredicted RBP11.8□□□□□ -0.52
SCAP-212ENST00000487942 MYOM3Q5VTT5 1437 aa11.79□□□□□ -0.52
SCAP-212ENST00000487942 MAST1Q9Y2H9 1570 aa11.79□□□□□ -0.52
SCAP-212ENST00000487942 DHX29Q7Z478 1369 aaKnown RBP11.79□□□□□ -0.52
SCAP-212ENST00000487942 PTPN23Q9H3S7 1636 aa11.78□□□□□ -0.52
SCAP-212ENST00000487942 CAMSAP1Q5T5Y3 1602 aa11.77□□□□□ -0.53
SCAP-212ENST00000487942 CEP152O94986 1710 aa11.77□□□□□ -0.53
SCAP-212ENST00000487942 NPATQ14207 1427 aa11.77□□□□□ -0.53
SCAP-212ENST00000487942 PTPRKQ15262 1439 aa11.77□□□□□ -0.53
SCAP-212ENST00000487942 RNF17Q9BXT8 1623 aaKnown RBP11.76□□□□□ -0.53
SCAP-212ENST00000487942 KIF3BO15066 747 aa11.76□□□□□ -0.53
SCAP-212ENST00000487942 CEP170BQ9Y4F5 1589 aaPredicted RBP11.75□□□□□ -0.53
SCAP-212ENST00000487942 RSPH4AQ5TD94 716 aa11.75□□□□□ -0.53
SCAP-212ENST00000487942 MIA2Q96PC5 1412 aa11.75□□□□□ -0.53
SCAP-212ENST00000487942 FBXO41Q8TF61 875 aa11.74□□□□□ -0.53
SCAP-212ENST00000487942 KDM5DQ9BY66 1539 aa11.74□□□□□ -0.53
SCAP-212ENST00000487942 MROH1Q8NDA8 1641 aa11.74□□□□□ -0.53
SCAP-212ENST00000487942 EIF2AK4Q9P2K8 1649 aaKnown RBP11.74□□□□□ -0.53
SCAP-212ENST00000487942 TSPY4P0CV99 314 aa11.73□□□□□ -0.53
SCAP-212ENST00000487942 TSPY10P0CW01 314 aa11.73□□□□□ -0.53
SCAP-212ENST00000487942 DNMT1P26358 1616 aaKnown RBP11.73□□□□□ -0.53
SCAP-212ENST00000487942 NCOA1Q15788 1441 aa11.73□□□□□ -0.53
SCAP-212ENST00000487942 POLR1AO95602 1720 aaPredicted RBP11.72□□□□□ -0.53
SCAP-212ENST00000487942 FBXO31Q5XUX0 539 aaPredicted RBP11.72□□□□□ -0.53
SCAP-212ENST00000487942 ZC3H13Q5T200 1668 aaKnown RBP11.71□□□□□ -0.53
SCAP-212ENST00000487942 CERKQ8TCT0 537 aa11.71□□□□□ -0.53
SCAP-212ENST00000487942 PTPRTO14522 1441 aa11.7□□□□□ -0.54
SCAP-212ENST00000487942 ABCC5O15440 1437 aa11.7□□□□□ -0.54
SCAP-212ENST00000487942 FGD6Q6ZV73 1430 aa11.7□□□□□ -0.54
SCAP-212ENST00000487942 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
SCAP-212ENST00000487942 ABCC3O15438 1527 aa11.7□□□□□ -0.54
SCAP-212ENST00000487942 FAM135AQ9P2D6 1515 aa11.7□□□□□ -0.54
SCAP-212ENST00000487942 PZPP20742 1482 aa11.7□□□□□ -0.54
SCAP-212ENST00000487942 TCOF1Q13428 1488 aaKnown RBP11.7□□□□□ -0.54
SCAP-212ENST00000487942 NCKAP5LQ9HCH0 1330 aa11.69□□□□□ -0.54
SCAP-212ENST00000487942 WASHC2CQ9Y4E1 1318 aa11.69□□□□□ -0.54
SCAP-212ENST00000487942 LTBP4Q8N2S1 1624 aa11.69□□□□□ -0.54
SCAP-212ENST00000487942 C19orf67A6NJJ6 358 aa11.69□□□□□ -0.54
SCAP-212ENST00000487942 DUOX2Q9NRD8 1548 aa11.69□□□□□ -0.54
SCAP-212ENST00000487942 DAPK1P53355 1430 aa11.69□□□□□ -0.54
SCAP-212ENST00000487942 A2ML1A8K2U0 1454 aa11.68□□□□□ -0.54
SCAP-212ENST00000487942 SHANK2Q9UPX8 1470 aa11.68□□□□□ -0.54
SCAP-212ENST00000487942 DEPDC5O75140 1603 aa11.67□□□□□ -0.54
SCAP-212ENST00000487942 TNRQ92752 1358 aa11.67□□□□□ -0.54
SCAP-212ENST00000487942 PLA2R1Q13018 1463 aa11.66□□□□□ -0.54
SCAP-212ENST00000487942 FARP1Q9Y4F1 1045 aaPredicted RBP11.66□□□□□ -0.54
SCAP-212ENST00000487942 NEURL4Q96JN8 1562 aa11.66□□□□□ -0.54
SCAP-212ENST00000487942 KIF15Q9NS87 1388 aa11.66□□□□□ -0.54
SCAP-212ENST00000487942 RRP7BPQ9NSQ0 103 aa11.65□□□□□ -0.54
SCAP-212ENST00000487942 PRDM15P57071 1507 aaPredicted RBP11.65□□□□□ -0.55
SCAP-212ENST00000487942 UBR1Q8IWV7 1749 aa11.64□□□□□ -0.55
SCAP-212ENST00000487942 SPATA31D1Q6ZQQ2 1576 aa11.64□□□□□ -0.55
SCAP-212ENST00000487942 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms