RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 ANO8Q9HCE9 1232 aaPredicted RBP5.99□□□□□ -1.45
GPNMB-212ENST00000487890 PLCG2P16885 1265 aa5.98□□□□□ -1.45
GPNMB-212ENST00000487890 MDM2Q00987 491 aaPredicted RBP5.98□□□□□ -1.45
GPNMB-212ENST00000487890 CCDC82Q8N4S0 544 aa5.98□□□□□ -1.45
GPNMB-212ENST00000487890 PTCD2Q8WV60 388 aaKnown RBP5.98□□□□□ -1.45
GPNMB-212ENST00000487890 SSTR3P32745 418 aaPredicted RBP5.97□□□□□ -1.45
GPNMB-212ENST00000487890 CLCN1P35523 988 aa5.97□□□□□ -1.45
GPNMB-212ENST00000487890 MCM6Q14566 821 aa5.97□□□□□ -1.45
GPNMB-212ENST00000487890 SKIV2LQ15477 1246 aaKnown RBP5.97□□□□□ -1.45
GPNMB-212ENST00000487890 PROCA1Q8NCQ7 364 aaPredicted RBP5.97□□□□□ -1.45
GPNMB-212ENST00000487890 EN1Q05925 392 aaPredicted RBP5.96□□□□□ -1.46
GPNMB-212ENST00000487890 RBM33Q96EV2 1170 aaKnown RBP5.96□□□□□ -1.46
GPNMB-212ENST00000487890 GPCPD1Q9NPB8 672 aa5.96□□□□□ -1.46
GPNMB-212ENST00000487890 COLQQ9Y215 455 aaPredicted RBP5.96□□□□□ -1.46
GPNMB-212ENST00000487890 NACADO15069 1562 aa5.96□□□□□ -1.46
GPNMB-212ENST00000487890 MAP3K7O43318 606 aa5.95□□□□□ -1.46
GPNMB-212ENST00000487890 FAM161AQ3B820 660 aa5.95□□□□□ -1.46
GPNMB-212ENST00000487890 NLRP7Q8WX94 980 aa5.95□□□□□ -1.46
GPNMB-212ENST00000487890 POM121Q96HA1 1249 aa5.95□□□□□ -1.46
GPNMB-212ENST00000487890 BEGAINQ9BUH8 593 aa5.95□□□□□ -1.46
GPNMB-212ENST00000487890 ZNF777Q9ULD5 760 aaPredicted RBP5.95□□□□□ -1.46
GPNMB-212ENST00000487890 PHF14O94880 888 aa5.94□□□□□ -1.46
GPNMB-212ENST00000487890 CLCN6P51797 869 aa5.94□□□□□ -1.46
GPNMB-212ENST00000487890 TSR1Q2NL82 804 aaKnown RBP5.94□□□□□ -1.46
GPNMB-212ENST00000487890 PELP1Q8IZL8 1130 aaKnown RBP5.94□□□□□ -1.46
GPNMB-212ENST00000487890 EPAS1Q99814 870 aa5.94□□□□□ -1.46
GPNMB-212ENST00000487890 POLR3EQ9NVU0 708 aa5.94□□□□□ -1.46
GPNMB-212ENST00000487890 HAX1O00165 279 aa5.93□□□□□ -1.46
GPNMB-212ENST00000487890 PDIA4P13667 645 aaKnown RBP5.93□□□□□ -1.46
GPNMB-212ENST00000487890 FNBP4Q8N3X1 1017 aaPredicted RBP5.93□□□□□ -1.46
GPNMB-212ENST00000487890 FAM217BQ9NTX9 383 aaPredicted RBP5.93□□□□□ -1.46
GPNMB-212ENST00000487890 PCDHGA10Q9Y5H3 936 aa5.93□□□□□ -1.46
GPNMB-212ENST00000487890 UNC13AQ9UPW8 1703 aa5.93□□□□□ -1.46
GPNMB-212ENST00000487890 SLC34A2O95436 690 aa5.92□□□□□ -1.46
GPNMB-212ENST00000487890 PROSER2Q86WR7 435 aaPredicted RBP5.92□□□□□ -1.46
GPNMB-212ENST00000487890 NECTIN2Q92692 538 aa5.92□□□□□ -1.46
GPNMB-212ENST00000487890 ATP1B4Q9UN42 357 aaPredicted RBP5.92□□□□□ -1.46
GPNMB-212ENST00000487890 POTEFA5A3E0 1075 aa5.91□□□□□ -1.46
GPNMB-212ENST00000487890 SEC24BO95487 1268 aa5.91□□□□□ -1.46
GPNMB-212ENST00000487890 SLAIN1Q8ND83 568 aa5.91□□□□□ -1.46
GPNMB-212ENST00000487890 MYSM1Q5VVJ2 828 aa5.9□□□□□ -1.46
GPNMB-212ENST00000487890 FBXO31Q5XUX0 539 aaPredicted RBP5.9□□□□□ -1.46
GPNMB-212ENST00000487890 TYW1BQ6NUM6 668 aa5.9□□□□□ -1.46
GPNMB-212ENST00000487890 METTL3Q86U44 580 aaKnown RBP5.9□□□□□ -1.46
GPNMB-212ENST00000487890 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.9□□□□□ -1.46
GPNMB-212ENST00000487890 RANGAP1P46060 587 aaPredicted RBP5.89□□□□□ -1.47
GPNMB-212ENST00000487890 SP7Q8TDD2 431 aaPredicted RBP5.89□□□□□ -1.47
GPNMB-212ENST00000487890 PXYLP1Q8TE99 480 aa5.89□□□□□ -1.47
GPNMB-212ENST00000487890 SNRKQ9NRH2 765 aa5.89□□□□□ -1.47
GPNMB-212ENST00000487890 ADGRG1Q9Y653 693 aa5.89□□□□□ -1.47
GPNMB-212ENST00000487890 RAD21O60216 631 aa5.88□□□□□ -1.47
GPNMB-212ENST00000487890 OATP04181 439 aa5.88□□□□□ -1.47
GPNMB-212ENST00000487890 PADI6Q6TGC4 694 aa5.88□□□□□ -1.47
GPNMB-212ENST00000487890 NPM2Q86SE8 214 aaKnown RBP5.88□□□□□ -1.47
GPNMB-212ENST00000487890 COG6Q9Y2V7 657 aa5.88□□□□□ -1.47
GPNMB-212ENST00000487890 KDM4FA0A1W2PPD8 638 aa5.87□□□□□ -1.47
GPNMB-212ENST00000487890 ZBTB7CA1YPR0 619 aa5.87□□□□□ -1.47
GPNMB-212ENST00000487890 TTC13Q8NBP0 860 aa5.87□□□□□ -1.47
GPNMB-212ENST00000487890 TBC1D2Q9BYX2 928 aa5.87□□□□□ -1.47
GPNMB-212ENST00000487890 PCDHGA4Q9Y5G9 962 aa5.87□□□□□ -1.47
GPNMB-212ENST00000487890 SPDYE5A6NIY4 337 aa5.86□□□□□ -1.47
GPNMB-212ENST00000487890 RFC5P40937 340 aa5.86□□□□□ -1.47
GPNMB-212ENST00000487890 CLK2P49760 499 aaKnown RBP5.86□□□□□ -1.47
GPNMB-212ENST00000487890 C6orf132Q5T0Z8 1188 aa5.86□□□□□ -1.47
GPNMB-212ENST00000487890 SERPINA10Q9UK55 444 aa5.86□□□□□ -1.47
GPNMB-212ENST00000487890 GABBR2O75899 941 aa5.85□□□□□ -1.47
GPNMB-212ENST00000487890 FOSBP53539 338 aa5.85□□□□□ -1.47
GPNMB-212ENST00000487890 C3orf67Q6ZVT6 689 aa5.85□□□□□ -1.47
GPNMB-212ENST00000487890 BANK1Q8NDB2 785 aa5.85□□□□□ -1.47
GPNMB-212ENST00000487890 FBXW7Q969H0 707 aa5.85□□□□□ -1.47
GPNMB-212ENST00000487890 CCDC97Q96F63 343 aaPredicted RBP5.85□□□□□ -1.47
GPNMB-212ENST00000487890 JPH4Q96JJ6 628 aa5.85□□□□□ -1.47
GPNMB-212ENST00000487890 LIMD1Q9UGP4 676 aa5.85□□□□□ -1.47
GPNMB-212ENST00000487890 ZCCHC6Q5VYS8 1495 aaKnown RBP5.84□□□□□ -1.47
GPNMB-212ENST00000487890 TRAIPQ9BWF2 469 aa5.84□□□□□ -1.47
GPNMB-212ENST00000487890 PLSCR2Q9NRY7 297 aa5.84□□□□□ -1.47
GPNMB-212ENST00000487890 ZNF330Q9Y3S2 320 aaPredicted RBP5.84□□□□□ -1.47
GPNMB-212ENST00000487890 MYO15BQ96JP2 1530 aa5.84□□□□□ -1.48
GPNMB-212ENST00000487890 PPP2R2DQ66LE6 453 aa5.83□□□□□ -1.48
GPNMB-212ENST00000487890 RIC3Q7Z5B4 369 aa5.83□□□□□ -1.48
GPNMB-212ENST00000487890 CERKQ8TCT0 537 aa5.83□□□□□ -1.48
GPNMB-212ENST00000487890 SLC39A7Q92504 469 aa5.83□□□□□ -1.48
GPNMB-212ENST00000487890 SCRIBQ14160 1630 aa5.82□□□□□ -1.48
GPNMB-212ENST00000487890 C7P10643 843 aa5.82□□□□□ -1.48
GPNMB-212ENST00000487890 TMEM259Q4ZIN3 620 aa5.82□□□□□ -1.48
GPNMB-212ENST00000487890 SPIRE2Q8WWL2 714 aa5.82□□□□□ -1.48
GPNMB-212ENST00000487890 DCBLD2Q96PD2 775 aa5.82□□□□□ -1.48
GPNMB-212ENST00000487890 BICRAQ9NZM4 1560 aa5.81□□□□□ -1.48
GPNMB-212ENST00000487890 PRSS12P56730 875 aa5.81□□□□□ -1.48
GPNMB-212ENST00000487890 DIXDC1Q155Q3 683 aa5.81□□□□□ -1.48
GPNMB-212ENST00000487890 ZNF454Q8N9F8 522 aa5.81□□□□□ -1.48
GPNMB-212ENST00000487890 MTMR14Q8NCE2 650 aa5.81□□□□□ -1.48
GPNMB-212ENST00000487890 ZDHHC16Q969W1 377 aa5.81□□□□□ -1.48
GPNMB-212ENST00000487890 ADAM33Q9BZ11 813 aa5.81□□□□□ -1.48
GPNMB-212ENST00000487890 GDPD2Q9HCC8 539 aa5.81□□□□□ -1.48
GPNMB-212ENST00000487890 RBM27Q9P2N5 1060 aaKnown RBP5.81□□□□□ -1.48
GPNMB-212ENST00000487890 FAM198AQ9UFP1 575 aa5.81□□□□□ -1.48
GPNMB-212ENST00000487890 METRNQ9UJH8 293 aa5.81□□□□□ -1.48
GPNMB-212ENST00000487890 CCDC9Q9Y3X0 531 aaKnown RBP5.81□□□□□ -1.48
GPNMB-212ENST00000487890 SPTLC1O15269 473 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms