RNA–Protein interactions for RNA: ENST00000487666.5

CDHR4-206, Transcript of cadherin related family member 4, humanhuman

TSL 2

Gene CDHR4, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-206ENST00000487666 LRRC7Q96NW7 1537 aa11.56□□□□□ -0.56
CDHR4-206ENST00000487666 NPHP4O75161 1426 aaPredicted RBP11.56□□□□□ -0.56
CDHR4-206ENST00000487666 POTEAQ6S8J7 498 aa11.56□□□□□ -0.56
CDHR4-206ENST00000487666 ANKLE2Q86XL3 938 aa11.56□□□□□ -0.56
CDHR4-206ENST00000487666 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
CDHR4-206ENST00000487666 STRCP1A6NGW2 1772 aa11.55□□□□□ -0.56
CDHR4-206ENST00000487666 MED14O60244 1454 aa11.55□□□□□ -0.56
CDHR4-206ENST00000487666 CASKIN1Q8WXD9 1431 aa11.54□□□□□ -0.56
CDHR4-206ENST00000487666 CCDC18Q5T9S5 1454 aa11.54□□□□□ -0.56
CDHR4-206ENST00000487666 PZPP20742 1482 aa11.53□□□□□ -0.56
CDHR4-206ENST00000487666 RNF17Q9BXT8 1623 aaKnown RBP11.53□□□□□ -0.56
CDHR4-206ENST00000487666 DEPDC5O75140 1603 aa11.52□□□□□ -0.57
CDHR4-206ENST00000487666 UGGT1Q9NYU2 1555 aa11.51□□□□□ -0.57
CDHR4-206ENST00000487666 THEMISQ8N1K5 641 aaPredicted RBP11.51□□□□□ -0.57
CDHR4-206ENST00000487666 CFDP1Q9UEE9 299 aaPredicted RBP11.51□□□□□ -0.57
CDHR4-206ENST00000487666 ZNF644Q9H582 1327 aaPredicted RBP11.51□□□□□ -0.57
CDHR4-206ENST00000487666 MIA2Q96PC5 1412 aa11.51□□□□□ -0.57
CDHR4-206ENST00000487666 PLEKHH2Q8IVE3 1493 aa11.51□□□□□ -0.57
CDHR4-206ENST00000487666 IQGAP1P46940 1657 aa11.5□□□□□ -0.57
CDHR4-206ENST00000487666 ADGBQ8N7X0 1667 aa11.5□□□□□ -0.57
CDHR4-206ENST00000487666 DHX29Q7Z478 1369 aaKnown RBP11.5□□□□□ -0.57
CDHR4-206ENST00000487666 SYNMO15061 1565 aa11.5□□□□□ -0.57
CDHR4-206ENST00000487666 NLRP1Q9C000 1473 aa11.49□□□□□ -0.57
CDHR4-206ENST00000487666 MBD5Q9P267 1494 aa11.49□□□□□ -0.57
CDHR4-206ENST00000487666 KDM5DQ9BY66 1539 aa11.49□□□□□ -0.57
CDHR4-206ENST00000487666 FAM135AQ9P2D6 1515 aa11.49□□□□□ -0.57
CDHR4-206ENST00000487666 KIF3BO15066 747 aa11.48□□□□□ -0.57
CDHR4-206ENST00000487666 CCNB3Q8WWL7 1395 aa11.47□□□□□ -0.57
CDHR4-206ENST00000487666 SETD1AO15047 1707 aaKnown RBP11.46□□□□□ -0.57
CDHR4-206ENST00000487666 FYCO1Q9BQS8 1478 aa11.46□□□□□ -0.57
CDHR4-206ENST00000487666 RTEL1-TNFRSF6BF6WH68 1400 aa11.46□□□□□ -0.57
CDHR4-206ENST00000487666 WASHC2CQ9Y4E1 1318 aa11.46□□□□□ -0.57
CDHR4-206ENST00000487666 ZC3H13Q5T200 1668 aaKnown RBP11.45□□□□□ -0.58
CDHR4-206ENST00000487666 FAM135BQ49AJ0 1406 aa11.44□□□□□ -0.58
CDHR4-206ENST00000487666 XIRP1Q702N8 1843 aaKnown RBP11.42□□□□□ -0.58
CDHR4-206ENST00000487666 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
CDHR4-206ENST00000487666 LTKP29376 864 aa11.41□□□□□ -0.58
CDHR4-206ENST00000487666 NCOA2Q15596 1464 aa11.4□□□□□ -0.58
CDHR4-206ENST00000487666 SCAF11Q99590 1463 aaKnown RBP11.4□□□□□ -0.58
CDHR4-206ENST00000487666 ERVK-7P63135 1459 aa11.39□□□□□ -0.59
CDHR4-206ENST00000487666 UPF1Q92900 1129 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDHR4-206ENST00000487666 ABCC3O15438 1527 aa11.39□□□□□ -0.59
CDHR4-206ENST00000487666 TMEM94Q12767 1356 aa11.38□□□□□ -0.59
CDHR4-206ENST00000487666 MTUS2Q5JR59 1369 aa11.38□□□□□ -0.59
CDHR4-206ENST00000487666 ARHGAP23Q9P227 1491 aa11.38□□□□□ -0.59
CDHR4-206ENST00000487666 ROBO1Q9Y6N7 1651 aa11.37□□□□□ -0.59
CDHR4-206ENST00000487666 RBM33Q96EV2 1170 aaKnown RBP11.37□□□□□ -0.59
CDHR4-206ENST00000487666 UBR1Q8IWV7 1749 aa11.37□□□□□ -0.59
CDHR4-206ENST00000487666 CCDC141Q6ZP82 1450 aa11.37□□□□□ -0.59
CDHR4-206ENST00000487666 MAP3K1Q13233 1512 aa11.36□□□□□ -0.59
CDHR4-206ENST00000487666 TXNDC2Q86VQ3 553 aa11.36□□□□□ -0.59
CDHR4-206ENST00000487666 SLIT1O75093 1534 aa11.35□□□□□ -0.59
CDHR4-206ENST00000487666 CAMSAP2Q08AD1 1489 aa11.34□□□□□ -0.59
CDHR4-206ENST00000487666 TRIM52Q96A61 297 aa11.33□□□□□ -0.6
CDHR4-206ENST00000487666 LRP6O75581 1613 aa11.33□□□□□ -0.6
CDHR4-206ENST00000487666 CEP162Q5TB80 1403 aa11.33□□□□□ -0.6
CDHR4-206ENST00000487666 SRCAPQ6ZRS2 3230 aa11.33□□□□□ -0.6
CDHR4-206ENST00000487666 MROH1Q8NDA8 1641 aa11.32□□□□□ -0.6
CDHR4-206ENST00000487666 JCADQ9P266 1359 aa11.32□□□□□ -0.6
CDHR4-206ENST00000487666 EHBP1L1Q8N3D4 1523 aa11.31□□□□□ -0.6
CDHR4-206ENST00000487666 KCNA6P17658 529 aa11.31□□□□□ -0.6
CDHR4-206ENST00000487666 RSPH4AQ5TD94 716 aa11.3□□□□□ -0.6
CDHR4-206ENST00000487666 PROSER2Q86WR7 435 aaPredicted RBP11.3□□□□□ -0.6
CDHR4-206ENST00000487666 LRRC9Q6ZRR7 1453 aa11.3□□□□□ -0.6
CDHR4-206ENST00000487666 TMEM2Q9UHN6 1383 aa11.29□□□□□ -0.6
CDHR4-206ENST00000487666 SLC26A8Q96RN1 970 aa11.29□□□□□ -0.6
CDHR4-206ENST00000487666 SLAIN2Q9P270 581 aa11.29□□□□□ -0.6
CDHR4-206ENST00000487666 EID1Q9Y6B2 187 aa11.29□□□□□ -0.6
CDHR4-206ENST00000487666 PRDM15P57071 1507 aaPredicted RBP11.29□□□□□ -0.6
CDHR4-206ENST00000487666 PHLPP1O60346 1717 aa11.29□□□□□ -0.6
CDHR4-206ENST00000487666 ARHGEF5Q12774 1597 aa11.28□□□□□ -0.6
CDHR4-206ENST00000487666 CEP152O94986 1710 aa11.28□□□□□ -0.6
CDHR4-206ENST00000487666 COL16A1Q07092 1604 aaPredicted RBP11.27□□□□□ -0.6
CDHR4-206ENST00000487666 TSPY4P0CV99 314 aa11.27□□□□□ -0.61
CDHR4-206ENST00000487666 TSPY10P0CW01 314 aa11.27□□□□□ -0.61
CDHR4-206ENST00000487666 ZNF772Q68DY9 489 aaPredicted RBP11.27□□□□□ -0.61
CDHR4-206ENST00000487666 TET3O43151 1660 aa11.27□□□□□ -0.61
CDHR4-206ENST00000487666 CFAP65Q6ZU64 1925 aaKnown RBP11.26□□□□□ -0.61
CDHR4-206ENST00000487666 PIK3C2BO00750 1634 aa11.26□□□□□ -0.61
CDHR4-206ENST00000487666 MSH6P52701 1360 aa11.26□□□□□ -0.61
CDHR4-206ENST00000487666 ARHGAP31Q2M1Z3 1444 aa11.26□□□□□ -0.61
CDHR4-206ENST00000487666 NKTRP30414 1462 aaKnown RBP11.25□□□□□ -0.61
CDHR4-206ENST00000487666 NWD1Q149M9 1564 aa11.25□□□□□ -0.61
CDHR4-206ENST00000487666 EIF2AK4Q9P2K8 1649 aaKnown RBP11.25□□□□□ -0.61
CDHR4-206ENST00000487666 MEX3CQ5U5Q3 659 aaKnown RBP11.25□□□□□ -0.61
CDHR4-206ENST00000487666 SPATA31A6Q5VVP1 1343 aa11.25□□□□□ -0.61
CDHR4-206ENST00000487666 RXRBP28702 533 aa11.24□□□□□ -0.61
CDHR4-206ENST00000487666 FGD6Q6ZV73 1430 aa11.24□□□□□ -0.61
CDHR4-206ENST00000487666 MAST1Q9Y2H9 1570 aa11.24□□□□□ -0.61
CDHR4-206ENST00000487666 CDK12Q9NYV4 1490 aaPredicted RBP11.23□□□□□ -0.61
CDHR4-206ENST00000487666 EFCAB6Q5THR3 1501 aa11.23□□□□□ -0.61
CDHR4-206ENST00000487666 IDI1Q13907 227 aa11.22□□□□□ -0.61
CDHR4-206ENST00000487666 STAG3Q9UJ98 1225 aa11.21□□□□□ -0.61
CDHR4-206ENST00000487666 RGS12O14924 1447 aa11.19□□□□□ -0.62
CDHR4-206ENST00000487666 AFF2P51816 1311 aa11.19□□□□□ -0.62
CDHR4-206ENST00000487666 KDM5AP29375 1690 aaKnown RBP11.19□□□□□ -0.62
CDHR4-206ENST00000487666 AHDC1Q5TGY3 1603 aaPredicted RBP11.19□□□□□ -0.62
CDHR4-206ENST00000487666 DUOX2Q9NRD8 1548 aa11.19□□□□□ -0.62
CDHR4-206ENST00000487666 SHPRHQ149N8 1683 aa11.18□□□□□ -0.62
CDHR4-206ENST00000487666 NUTM2BA6NNL0 878 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms