RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 LRRIQ1Q96JM4 1722 aa9.05□□□□□ -0.96
MACF1-221ENST00000487656 MLH3Q9UHC1 1453 aa9.05□□□□□ -0.96
MACF1-221ENST00000487656 PITPNM1O00562 1244 aa9.05□□□□□ -0.96
MACF1-221ENST00000487656 REREQ9P2R6 1566 aa9.04□□□□□ -0.96
MACF1-221ENST00000487656 CCDC18Q5T9S5 1454 aa9.04□□□□□ -0.96
MACF1-221ENST00000487656 CREBZFQ9NS37 354 aa9.04□□□□□ -0.96
MACF1-221ENST00000487656 STRCQ7RTU9 1775 aa9.04□□□□□ -0.96
MACF1-221ENST00000487656 DIP2CQ9Y2E4 1556 aa9.03□□□□□ -0.96
MACF1-221ENST00000487656 ZNF777Q9ULD5 760 aaPredicted RBP9.03□□□□□ -0.96
MACF1-221ENST00000487656 CASKIN1Q8WXD9 1431 aa9.03□□□□□ -0.96
MACF1-221ENST00000487656 C3P01024 1663 aa9.03□□□□□ -0.96
MACF1-221ENST00000487656 PREX2Q70Z35 1606 aa9.02□□□□□ -0.96
MACF1-221ENST00000487656 AGLP35573 1532 aa9.02□□□□□ -0.97
MACF1-221ENST00000487656 TRAPPC8Q9Y2L5 1435 aa9.02□□□□□ -0.97
MACF1-221ENST00000487656 ITSN2Q9NZM3 1697 aa9.01□□□□□ -0.97
MACF1-221ENST00000487656 PTPRTO14522 1441 aa9.01□□□□□ -0.97
MACF1-221ENST00000487656 CDC42BPAQ5VT25 1732 aa9.01□□□□□ -0.97
MACF1-221ENST00000487656 CNTLNQ9NXG0 1405 aa9.01□□□□□ -0.97
MACF1-221ENST00000487656 ABCA6Q8N139 1617 aa9.01□□□□□ -0.97
MACF1-221ENST00000487656 ABCC1P33527 1531 aa9□□□□□ -0.97
MACF1-221ENST00000487656 KIDINS220Q9ULH0 1771 aa9□□□□□ -0.97
MACF1-221ENST00000487656 GSE1Q14687 1217 aa9□□□□□ -0.97
MACF1-221ENST00000487656 HNRNPMP52272 730 aaKnown RBP eCLIP8.99□□□□□ -0.97
MACF1-221ENST00000487656 SPAG9O60271 1321 aaKnown RBP8.99□□□□□ -0.97
MACF1-221ENST00000487656 FYCO1Q9BQS8 1478 aa8.98□□□□□ -0.97
MACF1-221ENST00000487656 NUBP1P53384 320 aa8.98□□□□□ -0.97
MACF1-221ENST00000487656 CFDP1Q9UEE9 299 aaPredicted RBP8.98□□□□□ -0.97
MACF1-221ENST00000487656 ZMYM3Q14202 1370 aa8.98□□□□□ -0.97
MACF1-221ENST00000487656 DISP3Q9P2K9 1392 aa8.98□□□□□ -0.97
MACF1-221ENST00000487656 SUPT6HQ7KZ85 1726 aaKnown RBP8.97□□□□□ -0.97
MACF1-221ENST00000487656 DCAF8Q5TAQ9 597 aa8.97□□□□□ -0.97
MACF1-221ENST00000487656 SAMD9LQ8IVG5 1584 aa8.97□□□□□ -0.97
MACF1-221ENST00000487656 MROH2AA6NES4 1674 aa8.97□□□□□ -0.97
MACF1-221ENST00000487656 NPATQ14207 1427 aa8.97□□□□□ -0.97
MACF1-221ENST00000487656 PLEKHH2Q8IVE3 1493 aa8.96□□□□□ -0.97
MACF1-221ENST00000487656 GPATCH8Q9UKJ3 1502 aaKnown RBP8.96□□□□□ -0.97
MACF1-221ENST00000487656 RGL2O15211 777 aa8.96□□□□□ -0.98
MACF1-221ENST00000487656 CCNB3Q8WWL7 1395 aa8.96□□□□□ -0.98
MACF1-221ENST00000487656 KIAA1107Q9UPP5 1409 aa8.96□□□□□ -0.98
MACF1-221ENST00000487656 MNX1P50219 401 aaPredicted RBP8.95□□□□□ -0.98
MACF1-221ENST00000487656 GGT6Q6P531 493 aa8.95□□□□□ -0.98
MACF1-221ENST00000487656 NCOA1Q15788 1441 aa8.95□□□□□ -0.98
MACF1-221ENST00000487656 FAM212AQ96EL1 285 aa8.94□□□□□ -0.98
MACF1-221ENST00000487656 MTUS2Q5JR59 1369 aa8.94□□□□□ -0.98
MACF1-221ENST00000487656 IQSEC2Q5JU85 1478 aa8.94□□□□□ -0.98
MACF1-221ENST00000487656 ATP7AQ04656 1500 aa8.94□□□□□ -0.98
MACF1-221ENST00000487656 SYCP2Q9BX26 1530 aa8.94□□□□□ -0.98
MACF1-221ENST00000487656 CAMSAP1Q5T5Y3 1602 aa8.94□□□□□ -0.98
MACF1-221ENST00000487656 NCKAP5LQ9HCH0 1330 aa8.93□□□□□ -0.98
MACF1-221ENST00000487656 A2MP01023 1474 aa8.93□□□□□ -0.98
MACF1-221ENST00000487656 LTBP4Q8N2S1 1624 aa8.93□□□□□ -0.98
MACF1-221ENST00000487656 CLTCQ00610 1675 aaKnown RBP8.93□□□□□ -0.98
MACF1-221ENST00000487656 SOCS7O14512 581 aa8.92□□□□□ -0.98
MACF1-221ENST00000487656 PLCB2Q00722 1185 aa8.92□□□□□ -0.98
MACF1-221ENST00000487656 ILDR2Q71H61 639 aa8.92□□□□□ -0.98
MACF1-221ENST00000487656 ADGBQ8N7X0 1667 aa8.91□□□□□ -0.98
MACF1-221ENST00000487656 INO80Q9ULG1 1556 aaPredicted RBP8.9□□□□□ -0.98
MACF1-221ENST00000487656 UBAP1LF5GYI3 381 aa8.9□□□□□ -0.98
MACF1-221ENST00000487656 RSPH4AQ5TD94 716 aa8.9□□□□□ -0.98
MACF1-221ENST00000487656 CHADLQ6NUI6 762 aa8.9□□□□□ -0.98
MACF1-221ENST00000487656 PLA2R1Q13018 1463 aa8.89□□□□□ -0.99
MACF1-221ENST00000487656 PTPRKQ15262 1439 aa8.89□□□□□ -0.99
MACF1-221ENST00000487656 ZNF335Q9H4Z2 1342 aaPredicted RBP8.89□□□□□ -0.99
MACF1-221ENST00000487656 ZNF644Q9H582 1327 aaPredicted RBP8.89□□□□□ -0.99
MACF1-221ENST00000487656 ZNF142P52746 1687 aaPredicted RBP8.89□□□□□ -0.99
MACF1-221ENST00000487656 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.89□□□□□ -0.99
MACF1-221ENST00000487656 PLXNC1O60486 1568 aa8.89□□□□□ -0.99
MACF1-221ENST00000487656 RTEL1-TNFRSF6BF6WH68 1400 aa8.88□□□□□ -0.99
MACF1-221ENST00000487656 MYO3AQ8NEV4 1616 aa8.88□□□□□ -0.99
MACF1-221ENST00000487656 CEP170BQ9Y4F5 1589 aaPredicted RBP8.88□□□□□ -0.99
MACF1-221ENST00000487656 RASEFQ8IZ41 740 aa8.88□□□□□ -0.99
MACF1-221ENST00000487656 BBXQ8WY36 941 aaPredicted RBP8.88□□□□□ -0.99
MACF1-221ENST00000487656 DHX29Q7Z478 1369 aaKnown RBP8.87□□□□□ -0.99
MACF1-221ENST00000487656 SPATA31D1Q6ZQQ2 1576 aa8.87□□□□□ -0.99
MACF1-221ENST00000487656 KIF3BO15066 747 aa8.87□□□□□ -0.99
MACF1-221ENST00000487656 WASHC2CQ9Y4E1 1318 aa8.86□□□□□ -0.99
MACF1-221ENST00000487656 A2ML1A8K2U0 1454 aa8.86□□□□□ -0.99
MACF1-221ENST00000487656 TCOF1Q13428 1488 aaKnown RBP8.86□□□□□ -0.99
MACF1-221ENST00000487656 TSPY4P0CV99 314 aa8.86□□□□□ -0.99
MACF1-221ENST00000487656 TSPY10P0CW01 314 aa8.86□□□□□ -0.99
MACF1-221ENST00000487656 THEMISQ8N1K5 641 aaPredicted RBP8.86□□□□□ -0.99
MACF1-221ENST00000487656 TIAM1Q13009 1591 aa8.86□□□□□ -0.99
MACF1-221ENST00000487656 EHBP1L1Q8N3D4 1523 aa8.85□□□□□ -0.99
MACF1-221ENST00000487656 MBD5Q9P267 1494 aa8.85□□□□□ -0.99
MACF1-221ENST00000487656 TOM1O60784 492 aa8.85□□□□□ -0.99
MACF1-221ENST00000487656 CHGAP10645 457 aaKnown RBP8.85□□□□□ -0.99
MACF1-221ENST00000487656 PRKAR2AP13861 404 aaKnown RBP8.85□□□□□ -0.99
MACF1-221ENST00000487656 ANKLE2Q86XL3 938 aa8.85□□□□□ -0.99
MACF1-221ENST00000487656 FARP1Q9Y4F1 1045 aaPredicted RBP8.85□□□□□ -0.99
MACF1-221ENST00000487656 CEP162Q5TB80 1403 aa8.85□□□□□ -0.99
MACF1-221ENST00000487656 DNMT1P26358 1616 aaKnown RBP8.84□□□□□ -0.99
MACF1-221ENST00000487656 FBXO31Q5XUX0 539 aaPredicted RBP8.84□□□□□ -0.99
MACF1-221ENST00000487656 TAOK2Q9UL54 1235 aa8.84□□□□□ -0.99
MACF1-221ENST00000487656 TNRQ92752 1358 aa8.84□□□□□ -0.99
MACF1-221ENST00000487656 FXR2P51116 673 aaKnown RBP eCLIP8.83□□□□□ -15e-9■■■■□ 26.2
MACF1-221ENST00000487656 CCDC141Q6ZP82 1450 aa8.83□□□□□ -1
MACF1-221ENST00000487656 POLR1AO95602 1720 aaPredicted RBP8.83□□□□□ -1
MACF1-221ENST00000487656 FAM135AQ9P2D6 1515 aa8.82□□□□□ -1
MACF1-221ENST00000487656 CHRM1P11229 460 aaPredicted RBP8.82□□□□□ -1
MACF1-221ENST00000487656 HAP1P54257 671 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms