RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 TNRQ92752 1358 aa24.89■■□□□ 1.57
NME1-208ENST00000487481 PZPP20742 1482 aa24.87■■□□□ 1.57
NME1-208ENST00000487481 RTEL1-TNFRSF6BF6WH68 1400 aa24.86■■□□□ 1.57
NME1-208ENST00000487481 VWDEQ8N2E2 1590 aa24.86■■□□□ 1.57
NME1-208ENST00000487481 KDM5DQ9BY66 1539 aa24.86■■□□□ 1.57
NME1-208ENST00000487481 MBD5Q9P267 1494 aa24.84■■□□□ 1.57
NME1-208ENST00000487481 DHX29Q7Z478 1369 aaKnown RBP24.84■■□□□ 1.57
NME1-208ENST00000487481 TIAM1Q13009 1591 aa24.84■■□□□ 1.57
NME1-208ENST00000487481 MTUS2Q5JR59 1369 aa24.83■■□□□ 1.57
NME1-208ENST00000487481 PHF23Q9BUL5 403 aaPredicted RBP24.83■■□□□ 1.57
NME1-208ENST00000487481 DEPDC5O75140 1603 aa24.83■■□□□ 1.56
NME1-208ENST00000487481 ALKQ9UM73 1620 aa24.83■■□□□ 1.56
NME1-208ENST00000487481 ANKLE2Q86XL3 938 aa24.81■■□□□ 1.56
NME1-208ENST00000487481 MED14O60244 1454 aa24.81■■□□□ 1.56
NME1-208ENST00000487481 FBXO31Q5XUX0 539 aaPredicted RBP24.8■■□□□ 1.56
NME1-208ENST00000487481 NLRP1Q9C000 1473 aa24.8■■□□□ 1.56
NME1-208ENST00000487481 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.8■■□□□ 1.565e-11■■■■■ 54.8
NME1-208ENST00000487481 ZNF644Q9H582 1327 aaPredicted RBP24.79■■□□□ 1.56
NME1-208ENST00000487481 CHIC1Q5VXU3 224 aa24.78■■□□□ 1.56
NME1-208ENST00000487481 NPHP4O75161 1426 aaPredicted RBP24.78■■□□□ 1.56
NME1-208ENST00000487481 UGGT1Q9NYU2 1555 aa24.77■■□□□ 1.56
NME1-208ENST00000487481 THEMISQ8N1K5 641 aaPredicted RBP24.77■■□□□ 1.56
NME1-208ENST00000487481 EHBP1L1Q8N3D4 1523 aa24.76■■□□□ 1.55
NME1-208ENST00000487481 IQGAP1P46940 1657 aa24.76■■□□□ 1.55
NME1-208ENST00000487481 KIF3BO15066 747 aa24.76■■□□□ 1.55
NME1-208ENST00000487481 MIA2Q96PC5 1412 aa24.75■■□□□ 1.55
NME1-208ENST00000487481 RNF17Q9BXT8 1623 aaKnown RBP24.73■■□□□ 1.55
NME1-208ENST00000487481 SYNMO15061 1565 aa24.73■■□□□ 1.55
NME1-208ENST00000487481 CCDC141Q6ZP82 1450 aa24.73■■□□□ 1.55
NME1-208ENST00000487481 WASHC2CQ9Y4E1 1318 aa24.73■■□□□ 1.55
NME1-208ENST00000487481 CEP162Q5TB80 1403 aa24.7■■□□□ 1.55
NME1-208ENST00000487481 STRCP1A6NGW2 1772 aa24.7■■□□□ 1.54
NME1-208ENST00000487481 LRRC7Q96NW7 1537 aa24.69■■□□□ 1.54
NME1-208ENST00000487481 CAMSAP2Q08AD1 1489 aa24.65■■□□□ 1.54
NME1-208ENST00000487481 RSPH4AQ5TD94 716 aa24.64■■□□□ 1.54
NME1-208ENST00000487481 ZC3H13Q5T200 1668 aaKnown RBP24.63■■□□□ 1.53
NME1-208ENST00000487481 ARHGEF5Q12774 1597 aa24.6■■□□□ 1.53
NME1-208ENST00000487481 SENP3Q9H4L4 574 aaPredicted RBP24.59■■□□□ 1.53
NME1-208ENST00000487481 ABCC3O15438 1527 aa24.59■■□□□ 1.53
NME1-208ENST00000487481 ERVK-7P63135 1459 aa24.58■■□□□ 1.52
NME1-208ENST00000487481 NCOA2Q15596 1464 aa24.57■■□□□ 1.52
NME1-208ENST00000487481 UBR1Q8IWV7 1749 aa24.55■■□□□ 1.52
NME1-208ENST00000487481 SCAF11Q99590 1463 aaKnown RBP24.54■■□□□ 1.52
NME1-208ENST00000487481 RGS17Q9UGC6 210 aaPredicted RBP24.54■■□□□ 1.52
NME1-208ENST00000487481 EIF2AK4Q9P2K8 1649 aaKnown RBP24.53■■□□□ 1.52
NME1-208ENST00000487481 TSPY4P0CV99 314 aa24.52■■□□□ 1.52
NME1-208ENST00000487481 TSPY10P0CW01 314 aa24.52■■□□□ 1.52
NME1-208ENST00000487481 XIRP1Q702N8 1843 aaKnown RBP24.51■■□□□ 1.51
NME1-208ENST00000487481 MAST1Q9Y2H9 1570 aa24.5■■□□□ 1.51
NME1-208ENST00000487481 MROH1Q8NDA8 1641 aa24.49■■□□□ 1.51
NME1-208ENST00000487481 SLIT1O75093 1534 aa24.48■■□□□ 1.51
NME1-208ENST00000487481 ARHGAP23Q9P227 1491 aa24.48■■□□□ 1.51
NME1-208ENST00000487481 CEP152O94986 1710 aa24.47■■□□□ 1.51
NME1-208ENST00000487481 CFAP65Q6ZU64 1925 aaKnown RBP24.46■■□□□ 1.51
NME1-208ENST00000487481 FAM135BQ49AJ0 1406 aa24.44■■□□□ 1.5
NME1-208ENST00000487481 LTKP29376 864 aa24.41■■□□□ 1.5
NME1-208ENST00000487481 TXNDC2Q86VQ3 553 aa24.41■■□□□ 1.5
NME1-208ENST00000487481 ARHGAP31Q2M1Z3 1444 aa24.37■■□□□ 1.49
NME1-208ENST00000487481 EID1Q9Y6B2 187 aa24.37■■□□□ 1.49
NME1-208ENST00000487481 PRDM15P57071 1507 aaPredicted RBP24.36■■□□□ 1.49
NME1-208ENST00000487481 DUOX2Q9NRD8 1548 aa24.36■■□□□ 1.49
NME1-208ENST00000487481 POTEAQ6S8J7 498 aa24.36■■□□□ 1.49
NME1-208ENST00000487481 ROBO1Q9Y6N7 1651 aa24.35■■□□□ 1.49
NME1-208ENST00000487481 PIK3C2BO00750 1634 aa24.34■■□□□ 1.49
NME1-208ENST00000487481 TMEM94Q12767 1356 aa24.33■■□□□ 1.49
NME1-208ENST00000487481 LRRC9Q6ZRR7 1453 aa24.32■■□□□ 1.48
NME1-208ENST00000487481 TMEM2Q9UHN6 1383 aa24.32■■□□□ 1.48
NME1-208ENST00000487481 KDM5AP29375 1690 aaKnown RBP24.32■■□□□ 1.48
NME1-208ENST00000487481 MAP3K1Q13233 1512 aa24.31■■□□□ 1.48
NME1-208ENST00000487481 SETD1AO15047 1707 aaKnown RBP24.28■■□□□ 1.48
NME1-208ENST00000487481 ERBINQ96RT1 1412 aa24.27■■□□□ 1.48
NME1-208ENST00000487481 EFCAB6Q5THR3 1501 aa24.27■■□□□ 1.48
NME1-208ENST00000487481 MYOM3Q5VTT5 1437 aa24.27■■□□□ 1.48
NME1-208ENST00000487481 KCNA6P17658 529 aa24.26■■□□□ 1.47
NME1-208ENST00000487481 NKTRP30414 1462 aaKnown RBP24.26■■□□□ 1.47
NME1-208ENST00000487481 KIF15Q9NS87 1388 aa24.25■■□□□ 1.47
NME1-208ENST00000487481 NWD1Q149M9 1564 aa24.25■■□□□ 1.47
NME1-208ENST00000487481 TET3O43151 1660 aa24.24■■□□□ 1.47
NME1-208ENST00000487481 STAG3Q9UJ98 1225 aa24.24■■□□□ 1.47
NME1-208ENST00000487481 CROCC2H7BZ55 1655 aa24.22■■□□□ 1.47
NME1-208ENST00000487481 PHLPP1O60346 1717 aa24.21■■□□□ 1.47
NME1-208ENST00000487481 PROSER2Q86WR7 435 aaPredicted RBP24.21■■□□□ 1.47
NME1-208ENST00000487481 MSH6P52701 1360 aa24.19■■□□□ 1.46
NME1-208ENST00000487481 JCADQ9P266 1359 aa24.19■■□□□ 1.46
NME1-208ENST00000487481 KANK1Q14678 1352 aa24.18■■□□□ 1.46
NME1-208ENST00000487481 LMTK2Q8IWU2 1503 aa24.18■■□□□ 1.46
NME1-208ENST00000487481 SLC26A8Q96RN1 970 aa24.17■■□□□ 1.46
NME1-208ENST00000487481 VPS8Q8N3P4 1428 aa24.17■■□□□ 1.46
NME1-208ENST00000487481 ADGRB3O60242 1522 aa24.16■■□□□ 1.46
NME1-208ENST00000487481 IDI1Q13907 227 aa24.16■■□□□ 1.46
NME1-208ENST00000487481 RBM33Q96EV2 1170 aaKnown RBP24.16■■□□□ 1.46
NME1-208ENST00000487481 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.15■■□□□ 1.465e-8■□□□□ 8.5
NME1-208ENST00000487481 ABCC5O15440 1437 aa24.13■■□□□ 1.45
NME1-208ENST00000487481 RRP7BPQ9NSQ0 103 aa24.13■■□□□ 1.45
NME1-208ENST00000487481 COL16A1Q07092 1604 aaPredicted RBP24.13■■□□□ 1.45
NME1-208ENST00000487481 SLAIN2Q9P270 581 aa24.12■■□□□ 1.45
NME1-208ENST00000487481 NOS1P29475 1434 aa24.11■■□□□ 1.45
NME1-208ENST00000487481 KANK4Q5T7N3 995 aaPredicted RBP24.1■■□□□ 1.45
NME1-208ENST00000487481 CHD2O14647 1828 aaKnown RBP24.09■■□□□ 1.45
NME1-208ENST00000487481 FGD6Q6ZV73 1430 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms