RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 CLTCQ00610 1675 aaKnown RBP19.29■□□□□ 0.68
ITSN1-229ENST00000487427 RRP7BPQ9NSQ0 103 aa19.28■□□□□ 0.68
ITSN1-229ENST00000487427 PTPN23Q9H3S7 1636 aa19.28■□□□□ 0.68
ITSN1-229ENST00000487427 TCOF1Q13428 1488 aaKnown RBP19.28■□□□□ 0.68
ITSN1-229ENST00000487427 FAM135AQ9P2D6 1515 aa19.26■□□□□ 0.67
ITSN1-229ENST00000487427 FBXO31Q5XUX0 539 aaPredicted RBP19.26■□□□□ 0.67
ITSN1-229ENST00000487427 SHANK2Q9UPX8 1470 aa19.26■□□□□ 0.67
ITSN1-229ENST00000487427 DAPK1P53355 1430 aa19.25■□□□□ 0.67
ITSN1-229ENST00000487427 KIF15Q9NS87 1388 aa19.25■□□□□ 0.67
ITSN1-229ENST00000487427 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
ITSN1-229ENST00000487427 FBXO41Q8TF61 875 aa19.24■□□□□ 0.67
ITSN1-229ENST00000487427 KDM5DQ9BY66 1539 aa19.24■□□□□ 0.67
ITSN1-229ENST00000487427 DUOX2Q9NRD8 1548 aa19.24■□□□□ 0.67
ITSN1-229ENST00000487427 CHIC2Q9UKJ5 165 aa19.23■□□□□ 0.67
ITSN1-229ENST00000487427 NCOA1Q15788 1441 aa19.22■□□□□ 0.67
ITSN1-229ENST00000487427 PZPP20742 1482 aa19.22■□□□□ 0.67
ITSN1-229ENST00000487427 TNRQ92752 1358 aa19.21■□□□□ 0.67
ITSN1-229ENST00000487427 ANKRD30AQ9BXX3 1397 aa19.21■□□□□ 0.67
ITSN1-229ENST00000487427 PTPRTO14522 1441 aa19.21■□□□□ 0.67
ITSN1-229ENST00000487427 CERKQ8TCT0 537 aa19.2■□□□□ 0.66
ITSN1-229ENST00000487427 STRCQ7RTU9 1775 aa19.19■□□□□ 0.66
ITSN1-229ENST00000487427 DNMT1P26358 1616 aaKnown RBP19.19■□□□□ 0.66
ITSN1-229ENST00000487427 PKD2Q13563 968 aa19.19■□□□□ 0.66
ITSN1-229ENST00000487427 ERBINQ96RT1 1412 aa19.18■□□□□ 0.66
ITSN1-229ENST00000487427 NCKAP5LQ9HCH0 1330 aa19.18■□□□□ 0.66
ITSN1-229ENST00000487427 RNF17Q9BXT8 1623 aaKnown RBP19.18■□□□□ 0.66
ITSN1-229ENST00000487427 EIF2AK4Q9P2K8 1649 aaKnown RBP19.18■□□□□ 0.66
ITSN1-229ENST00000487427 A2ML1A8K2U0 1454 aa19.17■□□□□ 0.66
ITSN1-229ENST00000487427 CAMSAP1Q5T5Y3 1602 aa19.17■□□□□ 0.66
ITSN1-229ENST00000487427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.16■□□□□ 0.664e-6■□□□□ 11.1
ITSN1-229ENST00000487427 ABCC3O15438 1527 aa19.15■□□□□ 0.66
ITSN1-229ENST00000487427 CEP170BQ9Y4F5 1589 aaPredicted RBP19.15■□□□□ 0.66
ITSN1-229ENST00000487427 PLA2R1Q13018 1463 aa19.15■□□□□ 0.66
ITSN1-229ENST00000487427 MYO3AQ8NEV4 1616 aa19.14■□□□□ 0.66
ITSN1-229ENST00000487427 THEMISQ8N1K5 641 aaPredicted RBP19.14■□□□□ 0.65
ITSN1-229ENST00000487427 CROCC2H7BZ55 1655 aa19.14■□□□□ 0.65
ITSN1-229ENST00000487427 PPARGC1BQ86YN6 1023 aaKnown RBP19.13■□□□□ 0.65
ITSN1-229ENST00000487427 KANK1Q14678 1352 aa19.12■□□□□ 0.65
ITSN1-229ENST00000487427 ZNF142P52746 1687 aaPredicted RBP19.11■□□□□ 0.65
ITSN1-229ENST00000487427 MROH1Q8NDA8 1641 aa19.11■□□□□ 0.65
ITSN1-229ENST00000487427 ADGRL2O95490 1459 aa19.11■□□□□ 0.65
ITSN1-229ENST00000487427 NLRP1Q9C000 1473 aa19.11■□□□□ 0.65
ITSN1-229ENST00000487427 ARHGAP31Q2M1Z3 1444 aa19.09■□□□□ 0.65
ITSN1-229ENST00000487427 ZC3H13Q5T200 1668 aaKnown RBP19.08■□□□□ 0.65
ITSN1-229ENST00000487427 ANKLE2Q86XL3 938 aa19.08■□□□□ 0.64
ITSN1-229ENST00000487427 PRDM15P57071 1507 aaPredicted RBP19.07■□□□□ 0.64
ITSN1-229ENST00000487427 ERVK-7P63135 1459 aa19.07■□□□□ 0.64
ITSN1-229ENST00000487427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
ITSN1-229ENST00000487427 ANKRD50Q9ULJ7 1429 aa19.06■□□□□ 0.64
ITSN1-229ENST00000487427 SPATA31D1Q6ZQQ2 1576 aa19.06■□□□□ 0.64
ITSN1-229ENST00000487427 ROCK1Q13464 1354 aa19.04■□□□□ 0.64
ITSN1-229ENST00000487427 UGGT1Q9NYU2 1555 aa19.03■□□□□ 0.64
ITSN1-229ENST00000487427 ITGAEP38570 1179 aa19.02■□□□□ 0.64
ITSN1-229ENST00000487427 DEPDC5O75140 1603 aa19.02■□□□□ 0.64
ITSN1-229ENST00000487427 ZNF335Q9H4Z2 1342 aaPredicted RBP19.01■□□□□ 0.63
ITSN1-229ENST00000487427 LMTK2Q8IWU2 1503 aa19■□□□□ 0.63
ITSN1-229ENST00000487427 LTBP4Q8N2S1 1624 aa19■□□□□ 0.63
ITSN1-229ENST00000487427 CEP152O94986 1710 aa19■□□□□ 0.63
ITSN1-229ENST00000487427 VWDEQ8N2E2 1590 aa18.99■□□□□ 0.63
ITSN1-229ENST00000487427 IDI1Q13907 227 aa18.97■□□□□ 0.63
ITSN1-229ENST00000487427 STAG3Q9UJ98 1225 aa18.96■□□□□ 0.63
ITSN1-229ENST00000487427 NPHP4O75161 1426 aaPredicted RBP18.95■□□□□ 0.62
ITSN1-229ENST00000487427 MED14O60244 1454 aa18.95■□□□□ 0.62
ITSN1-229ENST00000487427 MSH5O43196 834 aa18.94■□□□□ 0.62
ITSN1-229ENST00000487427 SLC52A1Q9NWF4 448 aa18.94■□□□□ 0.62
ITSN1-229ENST00000487427 IQSEC2Q5JU85 1478 aa18.93■□□□□ 0.62
ITSN1-229ENST00000487427 TXNDC2Q86VQ3 553 aa18.93■□□□□ 0.62
ITSN1-229ENST00000487427 EID1Q9Y6B2 187 aa18.93■□□□□ 0.62
ITSN1-229ENST00000487427 NEURL4Q96JN8 1562 aa18.93■□□□□ 0.62
ITSN1-229ENST00000487427 NOS1P29475 1434 aa18.92■□□□□ 0.62
ITSN1-229ENST00000487427 RRBP1Q9P2E9 1410 aaKnown RBP18.92■□□□□ 0.62
ITSN1-229ENST00000487427 CFAP65Q6ZU64 1925 aaKnown RBP18.92■□□□□ 0.62
ITSN1-229ENST00000487427 LTKP29376 864 aa18.92■□□□□ 0.62
ITSN1-229ENST00000487427 RPRD2Q5VT52 1461 aaKnown RBP18.9■□□□□ 0.62
ITSN1-229ENST00000487427 EFCAB6Q5THR3 1501 aa18.9■□□□□ 0.62
ITSN1-229ENST00000487427 NUP155O75694 1391 aa18.89■□□□□ 0.61
ITSN1-229ENST00000487427 TMEM2Q9UHN6 1383 aa18.89■□□□□ 0.61
ITSN1-229ENST00000487427 ARHGAP23Q9P227 1491 aa18.89■□□□□ 0.61
ITSN1-229ENST00000487427 SCAF11Q99590 1463 aaKnown RBP18.88■□□□□ 0.61
ITSN1-229ENST00000487427 POLR1AO95602 1720 aaPredicted RBP18.88■□□□□ 0.61
ITSN1-229ENST00000487427 SLIT1O75093 1534 aa18.87■□□□□ 0.61
ITSN1-229ENST00000487427 UBR1Q8IWV7 1749 aa18.87■□□□□ 0.61
ITSN1-229ENST00000487427 UBAP1LF5GYI3 381 aa18.86■□□□□ 0.61
ITSN1-229ENST00000487427 UNC13BO14795 1591 aa18.85■□□□□ 0.61
ITSN1-229ENST00000487427 SYNMO15061 1565 aa18.85■□□□□ 0.61
ITSN1-229ENST00000487427 CPS1P31327 1500 aa18.84■□□□□ 0.61
ITSN1-229ENST00000487427 PIK3C2BO00750 1634 aa18.83■□□□□ 0.61
ITSN1-229ENST00000487427 TET3O43151 1660 aa18.82■□□□□ 0.6
ITSN1-229ENST00000487427 HDGFP51858 240 aaKnown RBP18.81■□□□□ 0.6
ITSN1-229ENST00000487427 IQGAP1P46940 1657 aa18.81■□□□□ 0.6
ITSN1-229ENST00000487427 KDM5AP29375 1690 aaKnown RBP18.79■□□□□ 0.6
ITSN1-229ENST00000487427 NAIPQ13075 1403 aa18.79■□□□□ 0.6
ITSN1-229ENST00000487427 TOM1O60784 492 aa18.78■□□□□ 0.6
ITSN1-229ENST00000487427 PPP4R3CPQ6ZMV5 832 aa18.78■□□□□ 0.6
ITSN1-229ENST00000487427 IQGAP3Q86VI3 1631 aa18.78■□□□□ 0.6
ITSN1-229ENST00000487427 CHGAP10645 457 aaKnown RBP18.77■□□□□ 0.6
ITSN1-229ENST00000487427 ADGRB3O60242 1522 aa18.77■□□□□ 0.6
ITSN1-229ENST00000487427 GCC2Q8IWJ2 1684 aa18.76■□□□□ 0.59
ITSN1-229ENST00000487427 BCANQ96GW7 911 aa18.75■□□□□ 0.59
ITSN1-229ENST00000487427 SLC26A8Q96RN1 970 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms